Variant report

Variant nsv1065570
Chromosome Location chr18:28974612-29049614
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:350 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:28972000-28976400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr18:28972800-28976800 Weak transcription Fetal Kidney kidney
3 chr18:28973400-28976600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr18:28973600-28975600 Weak transcription Duodenum Mucosa Duodenum
5 chr18:28973600-28989400 Weak transcription Esophagus oesophagus
6 chr18:28974200-28975400 Weak transcription HepG2 liver
7 chr18:28975000-28983400 Enhancers Fetal Intestine Large intestine
8 chr18:28975400-28975600 Enhancers Fetal Intestine Small intestine
9 chr18:28975400-28977000 Enhancers HepG2 liver
10 chr18:28975600-28975800 Enhancers Duodenum Mucosa Duodenum
11 chr18:28975600-28975800 Enhancers Sigmoid Colon Sigmoid Colon
12 chr18:28975600-28976200 Weak transcription Fetal Intestine Small intestine
13 chr18:28975800-28976400 Enhancers Rectal Mucosa Donor 31 rectum
14 chr18:28975800-28976600 Weak transcription Duodenum Mucosa Duodenum
15 chr18:28975800-28976600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr18:28976200-28983600 Enhancers Fetal Intestine Small intestine
17 chr18:28976400-28976600 Enhancers Rectal Mucosa Donor 29 rectum
18 chr18:28976400-28976800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:28976400-28977000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
20 chr18:28976400-28977800 Enhancers Left Ventricle heart
21 chr18:28976600-28976800 Active TSS Adipose Nuclei Adipose
22 chr18:28976600-28977000 Enhancers ES-WA7 Cell Line embryonic stem cell
23 chr18:28976600-28977000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
24 chr18:28976600-28977400 Enhancers Right Atrium heart
25 chr18:28976600-28977600 Enhancers Liver Liver
26 chr18:28976600-28977600 Enhancers Duodenum Mucosa Duodenum
27 chr18:28976600-28977600 Enhancers Stomach Mucosa stomach
28 chr18:28976600-28978400 Enhancers Small Intestine intestine
29 chr18:28976600-28979400 Enhancers Sigmoid Colon Sigmoid Colon
30 chr18:28976800-28977000 Flanking Active TSS Adipose Nuclei Adipose
31 chr18:28976800-28977000 Enhancers Colon Smooth Muscle Colon
32 chr18:28976800-28977400 Enhancers Fetal Kidney kidney
33 chr18:28976800-28977400 Enhancers Gastric stomach
34 chr18:28976800-28977600 Enhancers Fetal Stomach stomach
35 chr18:28976800-28977600 Enhancers Hela-S3 cervix
36 chr18:28976800-28977800 Enhancers Fetal Heart heart
37 chr18:28976800-28977800 Enhancers Fetal Lung lung
38 chr18:28976800-28978000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr18:28976800-28980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr18:28977000-28977200 Active TSS Adipose Nuclei Adipose
41 chr18:28977000-28977400 Active TSS Rectal Mucosa Donor 29 rectum
42 chr18:28977000-28977400 Flanking Active TSS HepG2 liver
43 chr18:28977000-28979400 Enhancers Rectal Mucosa Donor 31 rectum
44 chr18:28977200-28977400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr18:28977200-28977600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr18:28977200-28977600 Flanking Active TSS Adipose Nuclei Adipose
47 chr18:28977200-28977800 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr18:28977200-28977800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr18:28977200-28977800 Enhancers A549 lung
50 chr18:28977200-28979200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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