Variant report

Variant	nsv1067411
Chromosome Location	chr20:25955110-26305567
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4426)
CpG islands
(count:1529)
Chromatin interactive
region (count:66)
LncRNA
region (count:220)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:4426 , 50 per page) page: 1 2 3 4 5 6 7 ... 89

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:26188665-26190661	K562	blood:	n/a	n/a
2	ARID3A	chr20:26188670-26190654	HepG2	liver:	n/a	n/a
3	ARID3A	chr20:25989422-25989527	HepG2	liver:	n/a	n/a
4	ATF1	chr20:26207700-26208236	K562	blood:	n/a	n/a
5	ATF1	chr20:26204024-26204365	K562	blood:	n/a	n/a
6	ATF1	chr20:26200807-26200973	K562	blood:	n/a	n/a
7	ATF1	chr20:26209393-26209538	K562	blood:	n/a	n/a
8	ATF1	chr20:26210887-26211336	K562	blood:	n/a	n/a
9	ATF1	chr20:26259878-26260247	K562	blood:	n/a	n/a
10	ATF1	chr20:26300230-26300430	K562	blood:	n/a	n/a
11	ATF1	chr20:26206579-26206689	K562	blood:	n/a	n/a
12	ATF1	chr20:26302622-26302991	K562	blood:	n/a	n/a
13	ATF1	chr20:26293066-26293834	K562	blood:	n/a	n/a
14	ATF1	chr20:26202019-26202231	K562	blood:	n/a	n/a
15	ATF1	chr20:26212000-26212002	K562	blood:	n/a	n/a
16	ATF1	chr20:26269527-26269727	K562	blood:	n/a	n/a
17	ATF1	chr20:26213000-26213056	K562	blood:	n/a	n/a
18	ATF1	chr20:26210425-26210440	K562	blood:	n/a	n/a
19	ATF1	chr20:26207076-26207177	K562	blood:	n/a	n/a
20	ATF1	chr20:26202933-26202936	K562	blood:	n/a	n/a
21	ATF1	chr20:26201702-26201703	K562	blood:	n/a	n/a
22	ATF2	chr20:26188598-26189527	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr20:25990276-25990617	GM12878	blood:	n/a	n/a
24	ATF2	chr20:26188609-26189520	H1-hESC	embryonic stem cell:	n/a	n/a
25	ATF2	chr20:26188742-26189499	GM12878	blood:	n/a	n/a
26	ATF2	chr20:26190350-26190549	GM12878	blood:	n/a	n/a
27	ATF2	chr20:26189559-26190696	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF2	chr20:26188658-26189437	GM12878	blood:	n/a	n/a
29	ATF2	chr20:26189688-26190460	GM12878	blood:	n/a	n/a
30	ATF2	chr20:26189705-26190319	GM12878	blood:	n/a	n/a
31	ATF2	chr20:26189566-26190667	H1-hESC	embryonic stem cell:	n/a	n/a
32	ATF3	chr20:26189743-26190295	GM12878	blood:	n/a	n/a
33	ATF3	chr20:26189707-26190649	H1-hESC	embryonic stem cell:	n/a	chr20:26190344-26190352
34	ATF3	chr20:26189747-26190340	K562	blood:	n/a	n/a
35	ATF3	chr20:26188697-26190655	K562	blood:	n/a	chr20:26190344-26190352
36	ATF3	chr20:26189239-26189386	K562	blood:	n/a	n/a
37	ATF3	chr20:26188637-26190747	A549	lung:	n/a	chr20:26190344-26190352
38	ATF3	chr20:26190355-26190540	HepG2	liver:	n/a	n/a
39	ATF3	chr20:26190389-26190519	K562	blood:	n/a	n/a
40	ATF3	chr20:26189724-26190322	HepG2	liver:	n/a	n/a
41	ATF3	chr20:26188754-26189204	K562	blood:	n/a	n/a
42	ATF3	chr20:26188677-26189497	HepG2	liver:	n/a	n/a
43	ATF3	chr20:26188778-26189204	GM12878	blood:	n/a	n/a
44	ATF3	chr20:26189549-26190567	H1-hESC	embryonic stem cell:	n/a	chr20:26190344-26190352
45	ATF3	chr20:26188662-26189535	H1-hESC	embryonic stem cell:	n/a	n/a
46	ATF3	chr20:26189712-26190314	K562	blood:	n/a	n/a
47	ATF3	chr20:26188643-26190671	A549	lung:	n/a	chr20:26190344-26190352
48	BACH1	chr20:26188659-26190667	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr20:26268242-26268311	K562	blood:	n/a	n/a
50	BACH1	chr20:26188668-26190665	K562	blood:	n/a	n/a

(count:1529 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:26189665-26189715	AG09309	skin:	n/a
2	chr20:26062310-26062360	RPTEC	kidney:	n/a
3	chr20:26188963-26189013	ECC-1	luminal epithelium:	n/a
4	chr20:26189510-26189560	GM19239	blood:	n/a
5	chr20:26189665-26189715	AG09309	skin:	n/a
6	chr20:26062310-26062360	RPTEC	kidney:	n/a
7	chr20:26188963-26189013	ECC-1	luminal epithelium:	n/a
8	chr20:26189510-26189560	GM19239	blood:	n/a
9	chr20:26188908-26188958	PANC-1	pancreas:	n/a
10	chr20:25990680-25990730	HCT-116	colon:	n/a
11	chr20:26188943-26188993	PrEC	prostate:	n/a
12	chr20:26188997-26189047	PFSK-1	brain:	n/a
13	chr20:26189665-26189715	AG09319	gingival:	n/a
14	chr20:25988587-25988637	NT2-D1	testis:	n/a
15	chr20:26190328-26190378	AG09319	gingival:	n/a
16	chr20:26189510-26189560	NB4	blood:	n/a
17	chr20:26190328-26190378	HCF	heart:	n/a
18	chr20:26186908-26186958	HCPEpiC	choroid plexus:	n/a
19	chr20:25991114-25991164	GM12878	blood:	n/a
20	chr20:26189665-26189715	U87	brain:	n/a
21	chr20:26188997-26189047	HL-60	blood:	n/a
22	chr20:26188963-26189013	HRPEpiC	eye:	n/a
23	chr20:26188971-26189021	ovcar-3	ovarian:	n/a
24	chr20:26189510-26189560	K562	blood:	n/a
25	chr20:25989032-25989082	NHBE	bronchial:	n/a
26	chr20:25988266-25988316	NHDF-neo	bronchial:	n/a
27	chr20:25988587-25988637	HRCEpiC	kidney:	n/a
28	chr20:26188908-26188958	NH-A	brain:	n/a
29	chr20:25990680-25990730	SK-N-MC	brain:	n/a
30	chr20:26188997-26189047	HRE	kidney:	n/a
31	chr20:26189510-26189560	Caco-2	colon:	n/a
32	chr20:25988587-25988637	GM12891	blood:	n/a
33	chr20:26189665-26189715	SK-N-SH	brain:	n/a
34	chr20:26186908-26186958	HCM	heart:	n/a
35	chr20:26186908-26186958	AG10803	skin:	n/a
36	chr20:26186908-26186958	LNCaP	prostate:	n/a
37	chr20:25991114-25991164	AG04450	lung:	fetal
38	chr20:26188639-26188689	HCM	heart:	n/a
39	chr20:25989674-25989724	HRPEpiC	eye:	n/a
40	chr20:26190354-26190404	HUVEC	blood vessel:	n/a
41	chr20:25988266-25988316	HCPEpiC	choroid plexus:	n/a
42	chr20:26188971-26189021	H1-hESC	embryonic stem cell:	embryo
43	chr20:25990680-25990730	HNPCEpiC	eye:	n/a
44	chr20:26192541-26192591	SK-N-SH_RA	brain:	n/a
45	chr20:25988266-25988316	RPTEC	kidney:	n/a
46	chr20:26188919-26188969	CMK	blood:	n/a
47	chr20:25988266-25988316	ProgFib	skin:	n/a
48	chr20:26188976-26189026	HCM	heart:	n/a
49	chr20:25991114-25991164	HIPEpiC	eye:	n/a
50	chr20:26186908-26186958	AG04449	skin:	fetal

(count:66 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr16:33960778..33961976-chr20:26188545..26190262,6	K562	blood:
2	chr20:26188413..26189362-chr8:101964386..101965001,2	MCF-7	breast:
3	chr20:26201563..26203476-chr3:75993448..75995749,2	K562	blood:
4	chr12:127649002..127652005-chr20:26189997..26191614,3	K562	blood:
5	chr20:26188395..26190565-chr6:74228700..74231505,2	MCF-7	breast:
6	chr20:26208071..26209607-chr3:75987301..75988916,2	K562	blood:
7	chr18:8406500..8407500-chr20:26188735..26189378,2	MCF-7	breast:
8	chr19:56154889..56155389-chr20:26189706..26190477,2	K562	blood:
9	chr2:133013729..133016735-chr20:26188305..26190826,4	MCF-7	breast:
10	chr2:133011277..133016757-chr20:26187363..26191986,20	K562	blood:
11	chr13:63637281..63639152-chr20:26145559..26147940,2	K562	blood:
12	chr20:26189964..26190759-chr22:50700113..50700613,2	MCF-7	breast:
13	chr20:26192921..26195094-chr20:26197740..26199404,2	K562	blood:
14	chr2:133015237..133015768-chr20:26189161..26190454,3	K562	blood:
15	chr2:133015211..133015762-chr20:26189170..26190019,2	MCF-7	breast:
16	chr2:133014738..133015584-chr20:26189167..26190034,2	NB4	blood:
17	chr20:26187350..26191964-chr21:9824053..9828992,54	K562	blood:
18	chr16:33961300..33961956-chr20:26188840..26189578,6	MCF-7	breast:
19	chr13:63647812..63648534-chr20:26148535..26149113,2	MCF-7	breast:
20	chr20:26131190..26134756-chr7:57619861..57622623,3	K562	blood:
21	chr20:26188433..26190277-chr3:193787174..193790154,2	K562	blood:
22	chr20:26188254..26190671-chr21:9824984..9827890,92	MCF-7	breast:
23	chr20:26208095..26209894-chr3:75988198..75990401,2	MCF-7	breast:
24	chr2:133014718..133015708-chr20:26189240..26189953,2	MCF-7	breast:
25	chr20:26189053..26190595-chr8:67624606..67626126,2	MCF-7	breast:
26	chr2:133014709..133015762-chr20:26188882..26190143,12	MCF-7	breast:
27	chr2:133011277..133017359-chr20:26187383..26191986,21	K562	blood:
28	chr16:33959793..33967555-chr20:26187372..26191632,15	K562	blood:
29	chr20:26187251..26191978-chr21:9823998..9829001,56	K562	blood:
30	chr16:33961286..33962956-chr20:26188880..26190564,2	MCF-7	breast:
31	chr13:63637188..63639152-chr20:26145559..26148373,3	K562	blood:
32	chr12:20704427..20705972-chr20:26188595..26190576,2	MCF-7	breast:
33	chr20:26190004..26190733-chr8:67687205..67687727,4	MCF-7	breast:
34	chr16:33961305..33961892-chr20:26188839..26189533,2	MCF-7	breast:
35	chr16:33961325..33966193-chr20:26187372..26191793,13	K562	blood:
36	chr20:26188341..26189368-chr21:9825099..9826092,4	MCF-7	breast:
37	chr2:133014681..133015764-chr20:26189070..26190458,26	MCF-7	breast:
38	chr20:26201915..26204776-chr3:75992954..75996738,5	MCF-7	breast:
39	chr20:26188271..26189555-chr21:9824988..9827433,58	MCF-7	breast:
40	chr2:133014727..133015757-chr20:26189158..26190413,12	MCF-7	breast:
41	chr20:26188251..26190477-chr21:9825050..9827838,61	MCF-7	breast:
42	chr20:26188344..26189679-chr21:9825010..9826530,20	HCT-116	colon:
43	chr12:20703970..20704942-chr20:26190011..26190793,2	K562	blood:
44	chr20:26206073..26206971-chr3:75991464..75992265,2	MCF-7	breast:
45	chr16:33960780..33961953-chr20:26188513..26190294,8	MCF-7	breast:
46	chr1:17866319..17866839-chr20:26189992..26190745,2	MCF-7	breast:
47	chr2:133013667..133017081-chr20:26187658..26190834,11	MCF-7	breast:
48	chr16:33964537..33965670-chr20:26188912..26190067,3	K562	blood:
49	chr20:26187273..26191752-chr21:9823988..9828758,49	MCF-7	breast:
50	chr20:26188275..26190975-chr21:9824996..9827903,45	K562	blood:

(count:220 , 50 per page) page: 1 2 3 4 5

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195
2	lnc-FAM182A-4	chr20:26049573-26049840	ENSG00000125804.9
3	lnc-FAM182B-6	chr20:26168271-26168473	ENSG00000227195.4
4	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
5	lnc-FAM182A-4	chr20:26056970-26057076	ENSG00000125804.9
6	lnc-FAM182B-6	chr20:26189799-26189858	ENSG00000227195.4
7	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
8	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
9	lnc-FAM182B-6	chr20:26168271-26168473	ENSG00000227195.4
10	lnc-FAM182B-6	chr20:26188939-26189080	ENSG00000227195.4
11	lnc-FAM182B-6	chr20:26168346-26168473	ENSG00000227195.4
12	lnc-FAM182A-4	chr20:26063530-26063584	ENSG00000125804.9
13	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
14	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
15	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
16	lnc-FAM182B-6	chr20:26180832-26180952	ENSG00000227195.4
17	lnc-FAM182B-6	chr20:26167632-26168219	XLOC_013715
18	lnc-FAM182B-6	chr20:26231899-26232102	ENSG00000227195.4
19	lnc-FAM182B-6	chr20:26189783-26189897	ENSG00000227195.4
20	lnc-FAM182A-2	chr20:26171625-26171691	XLOC_013504
21	lnc-FAM182B-6	chr20:26174934-26175080	ENSG00000227195.4
22	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
23	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195.4
24	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
25	lnc-FAM182B-6	chr20:26189783-26189858	ENSG00000227195.4
26	lnc-FAM182B-6	chr20:26189806-26189929	ENSG00000227195.4
27	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
28	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
29	lnc-FAM182B-5	chr20:26157211-26157741	XLOC_013714
30	lnc-FAM182B-6	chr20:26189885-26189959	ENSG00000227195.4
31	lnc-FAM182A-6	chr20:25983291-25983721	ucscGeneNc_uc010gdq_1
32	lnc-FAM182B-6	chr20:26174934-26175080	ENSG00000227195.4
33	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
34	lnc-FAM182A-4	chr20:26049553-26049840	ENSG00000125804.9
35	lnc-FAM182B-6	chr20:26172769-26172868	ENSG00000227195.4
36	lnc-FAM182B-6	chr20:26180085-26180159	ENSG00000227195.4
37	lnc-FAM182B-6	chr20:26172429-26172536	ENSG00000227195
38	lnc-FAM182A-5	chr20:26122024-26122582	NONHSAT079227
39	lnc-FAM182B-6	chr20:26172429-26172497	ENSG00000227195.4
40	lnc-FAM182A-6	chr20:25968084-25968225	NONHSAT079206
41	lnc-FAM182B-4	chr20:26114675-26114834	XLOC_013713
42	lnc-FAM182B-6	chr20:26168460-26168735	ENSG00000227195.4
43	lnc-FAM182B-6	chr20:26172769-26172868	XLOC_013715
44	lnc-FAM182A-4	chr20:26072148-26072255	ENSG00000125804.9
45	lnc-FAM182B-6	chr20:26181094-26181178	ENSG00000227195.4
46	lnc-FAM182A-6	chr20:25999468-25999548	NONHSAT147161
47	lnc-FAM182A-5	chr20:26119625-26119691	NONHSAT079227
48	lnc-FAM182B-6	chr20:26188781-26188874	ENSG00000227195.4
49	lnc-FAM182B-6	chr20:26189900-26189978	ENSG00000227195.4
50	lnc-FAM182B-6	chr20:26170599-26170755	ENSG00000227195.4

miRNA name	Chromosome Location	mirBase accession
hsa-miR-663a	chr20:26188879-26188900	MIMAT0003326

No data

Variant related genes	Relation type
ENSG00000230440	TF binding region
ENSG00000231081	TF binding region
ENSG00000204556	TF binding region
ENSG00000238129	TF binding region
FAM182A	TF binding region
MIR663A	TF binding region
NCOR1P1	TF binding region
ENSG00000230440	CpG island
ENSG00000231081	CpG island
ENSG00000204556	CpG island
ENSG00000238129	CpG island
FAM182A	CpG island
MIR663A	CpG island
NCOR1P1	CpG island
ENSG00000104205	chromatin interactions
ENSG00000074964	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000125445	chromatin interactions
ENSG00000221288	chromatin interactions
ENSG00000200434	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000031698	chromatin interactions
ENSG00000163602	chromatin interactions
ENSG00000239776	chromatin interactions
ENSG00000125447	chromatin interactions
ENSG00000207986	chromatin interactions
ENSG00000256663	chromatin interactions
ENSG00000263970	chromatin interactions
ENSG00000230102	chromatin interactions
ENSG00000256642	chromatin interactions
ENSG00000188130	chromatin interactions
ENSG00000163046	chromatin interactions
ENSG00000005436	chromatin interactions
ENSG00000164924	chromatin interactions
ENSG00000171425	chromatin interactions
JUND	Mature miRNA region
TCEAL1	Mature miRNA region
HSPG2	Mature miRNA region
CDK1	Mature miRNA region
JUNB	Mature miRNA region
MUC17	miRNA target sites
NXT2	miRNA target sites
SLC16A1	miRNA target sites
LIMCH1	miRNA target sites

Extended variants
information (count: 12405 )
Associated
traits (count: 49 )

Variant overlapped rSNPs/rCNVs (count:12405 , 50 per page) page: 1 2 3 4 5 6 7 ... 249

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7267539	chr20:25956040-25956041	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs550110232	chr20:25956052-25956053	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs35855772	chr20:25956058-25956059	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs374271178	chr20:25956062-25956063	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs58999745	chr20:25956063-25956064	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs397864668	chr20:25956065-25956066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs529454899	chr20:25956067-25956068	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs191078090	chr20:25956093-25956094	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs566354789	chr20:25956131-25956132	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs183246231	chr20:25956139-25956140	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs558151761	chr20:25956171-25956172	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs571674362	chr20:25956199-25956200	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs6107118	chr20:25956203-25956204	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs534634072	chr20:25956205-25956206	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs138791736	chr20:25956215-25956216	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs138096136	chr20:25956310-25956311	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs140783684	chr20:25956311-25956312	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs7274601	chr20:25956353-25956354	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs188616493	chr20:25956369-25956370	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs552881874	chr20:25956370-25956371	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs369300042	chr20:25957219-25957220	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs559629716	chr20:25957220-25957221	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs563573581	chr20:25957223-25957224	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs28619305	chr20:25957236-25957237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs112878809	chr20:25957249-25957250	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs149905296	chr20:25957251-25957252	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs13039873	chr20:25957268-25957269	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs191229427	chr20:25957280-25957281	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs369332893	chr20:25957289-25957290	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs111416581	chr20:25957296-25957297	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs34666366	chr20:25957305-25957306	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs6051072	chr20:25957324-25957325	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs536320179	chr20:25957343-25957344	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs73603420	chr20:25957354-25957355	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs149037022	chr20:25957362-25957363	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs145798102	chr20:25957368-25957369	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs538424898	chr20:25957379-25957380	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs558859547	chr20:25957422-25957423	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs531330153	chr20:25957433-25957434	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs115452667	chr20:25957443-25957444	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs113000396	chr20:25957455-25957456	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs185713856	chr20:25957459-25957460	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs190246655	chr20:25957467-25957468	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs561311093	chr20:25957500-25957501	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs115683799	chr20:25957510-25957511	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs62213613	chr20:25957511-25957512	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs560271936	chr20:25957521-25957522	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs73603421	chr20:25957529-25957530	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs2252934	chr20:25957535-25957536	Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
50	rs34479827	chr20:25957540-25957541	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:49)

Disease	PMID	Source
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Bladder cancer	21909424	CNVD
Esophageal cancer	21851588	CNVD
Chordoma	18071362	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Medulloblastoma	21163964	CNVD

Chromatin state (count:1380 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25956000-25956400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr20:25957200-25957600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr20:25957600-25964200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr20:25961000-25961400	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr20:25964200-25964400	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr20:25964200-25965400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr20:25964400-25965400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr20:25965000-25965600	Enhancers	Fetal Stomach	stomach
9	chr20:25965000-25968600	Active TSS	Brain Germinal Matrix	brain
10	chr20:25965200-25965800	Active TSS	Skeletal Muscle Male	skeletal muscle
11	chr20:25965200-25966600	Active TSS	Brain Inferior Temporal Lobe	brain
12	chr20:25965200-25966600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr20:25965200-25966800	Active TSS	Fetal Brain Female	brain
14	chr20:25965400-25965600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr20:25965400-25965600	Active TSS	Fetal Adrenal Gland	Adrenal Gland
16	chr20:25965400-25965600	Active TSS	Fetal Muscle Trunk	muscle
17	chr20:25965400-25965600	Bivalent Enhancer	Placenta	Placenta
18	chr20:25965400-25965800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr20:25965400-25965800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr20:25965400-25965800	Active TSS	Muscle Satellite Cultured Cells	--
21	chr20:25965400-25966000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr20:25965400-25966000	Active TSS	Left Ventricle	heart
23	chr20:25965400-25966000	Active TSS	Ovary	ovary
24	chr20:25965400-25966000	Active TSS	Psoas Muscle	Psoas
25	chr20:25965400-25966000	Active TSS	HSMM	muscle
26	chr20:25965400-25966000	Active TSS	NH-A	brain
27	chr20:25965400-25966000	Active TSS	Osteobl	bone
28	chr20:25965400-25966200	Active TSS	Primary T cells fromperipheralblood	blood
29	chr20:25965400-25966200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr20:25965400-25966200	Active TSS	Colon Smooth Muscle	Colon
31	chr20:25965400-25966200	Active TSS	Duodenum Smooth Muscle	Duodenum
32	chr20:25965400-25966200	Active TSS	Right Ventricle	heart
33	chr20:25965400-25966200	Active TSS	Stomach Smooth Muscle	stomach
34	chr20:25965400-25966200	Active TSS	Thymus	Thymus
35	chr20:25965400-25966400	Enhancers	Primary T helper naive cells from peripheral blood	blood
36	chr20:25965400-25966400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr20:25965400-25966400	Active TSS	Brain Anterior Caudate	brain
38	chr20:25965400-25966400	Active TSS	Brain Hippocampus Middle	brain
39	chr20:25965400-25966400	Active TSS	Brain Substantia Nigra	brain
40	chr20:25965400-25966600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
41	chr20:25965400-25966800	Active TSS	Brain Cingulate Gyrus	brain
42	chr20:25965600-25965800	Enhancers	Esophagus	oesophagus
43	chr20:25965600-25965800	Active TSS	Fetal Stomach	stomach
44	chr20:25965600-25965800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
45	chr20:25965600-25966000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr20:25965600-25966000	Active TSS	Breast Myoepithelial Primary Cells	Breast
47	chr20:25965600-25966000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr20:25965600-25966000	Active TSS	Aorta	Aorta
49	chr20:25965600-25966000	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
50	chr20:25965600-25966000	Flanking Active TSS	Fetal Muscle Trunk	muscle

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