The 2.0 version of rSNPBase

Variant report

Variant nsv298769
Chromosome Location chr5:80901009-80901010
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80883200-80905800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:80883800-80909200 Weak transcription HSMM muscle
3 chr5:80885200-80905400 Weak transcription Pancreas Pancrea
4 chr5:80886800-80905400 Weak transcription Brain Substantia Nigra brain
5 chr5:80887000-80905600 Weak transcription Brain Anterior Caudate brain
6 chr5:80887000-80922400 Weak transcription Psoas Muscle Psoas
7 chr5:80887200-80905400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr5:80887200-80911200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr5:80887400-80904600 Weak transcription Osteobl bone
10 chr5:80888600-80905200 Weak transcription Brain Germinal Matrix brain
11 chr5:80888600-80905400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr5:80888800-80905600 Weak transcription Fetal Stomach stomach
13 chr5:80892000-80905600 Weak transcription Gastric stomach
14 chr5:80892800-80904600 Weak transcription Fetal Brain Male brain
15 chr5:80893400-80926000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr5:80893600-80905600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr5:80893600-80905600 Weak transcription Aorta Aorta
18 chr5:80893600-80909600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr5:80893800-80903000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr5:80894000-80901600 Weak transcription H1 Cell Line embryonic stem cell
21 chr5:80894400-80905200 Weak transcription Fetal Intestine Large intestine
22 chr5:80894400-80905400 Weak transcription Fetal Brain Female brain
23 chr5:80894400-80905800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr5:80894600-80905600 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr5:80894600-80905600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr5:80894600-80905600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:80894600-80905600 Weak transcription Fetal Muscle Trunk muscle
28 chr5:80894600-80905600 Weak transcription Left Ventricle heart
29 chr5:80894800-80905400 Weak transcription Fetal Kidney kidney
30 chr5:80894800-80905600 Weak transcription Adipose Nuclei Adipose
31 chr5:80895000-80905400 Weak transcription Fetal Muscle Leg muscle
32 chr5:80895000-80905600 Weak transcription Brain Hippocampus Middle brain
33 chr5:80895200-80905400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr5:80895200-80909600 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr5:80895400-80904800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr5:80895400-80905400 Weak transcription Liver Liver
37 chr5:80895400-80905400 Weak transcription Ovary ovary
38 chr5:80895600-80909200 Weak transcription Primary T cells fromperipheralblood blood
39 chr5:80895800-80904600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr5:80895800-80904800 Weak transcription Fetal Lung lung
41 chr5:80895800-80905800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr5:80895800-80912000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr5:80895800-80922600 Weak transcription Fetal Heart heart
44 chr5:80897200-80911800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr5:80897400-80905600 Weak transcription Esophagus oesophagus
46 chr5:80897600-80905600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr5:80897600-80922400 Weak transcription Colon Smooth Muscle Colon
48 chr5:80897800-80905600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr5:80898000-80901800 Weak transcription Primary hematopoietic stem cells blood
50 chr5:80898000-80905800 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015