The 2.0 version of rSNPBase

Variant report

Variant nsv304293
Chromosome Location chr5:80939415-80939416
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80906000-80946600 Weak transcription Brain Anterior Caudate brain
2 chr5:80906000-80947000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:80906200-80942400 Weak transcription Esophagus oesophagus
4 chr5:80906200-80947800 Weak transcription Brain Germinal Matrix brain
5 chr5:80910400-80953000 Weak transcription Primary T cells fromperipheralblood blood
6 chr5:80910800-80949200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr5:80918400-80939800 Weak transcription Fetal Lung lung
8 chr5:80920600-80946800 Weak transcription Primary monocytes fromperipheralblood blood
9 chr5:80921200-80983000 Weak transcription Aorta Aorta
10 chr5:80923000-80952800 Weak transcription Fetal Intestine Large intestine
11 chr5:80923200-80942000 Weak transcription Fetal Intestine Small intestine
12 chr5:80923200-80947000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr5:80923200-80948400 Weak transcription K562 blood
14 chr5:80924200-80962800 Weak transcription Ovary ovary
15 chr5:80924800-80972000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr5:80926200-80943200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr5:80926200-80943400 Weak transcription Fetal Kidney kidney
18 chr5:80926200-80947000 Weak transcription Fetal Brain Male brain
19 chr5:80928600-80943600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr5:80929600-80940200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:80930000-80940000 Weak transcription GM12878-XiMat blood
22 chr5:80930400-80947400 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr5:80930800-80945000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr5:80930800-80953400 Weak transcription Right Ventricle heart
25 chr5:80931000-80952800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr5:80932200-80943600 Weak transcription Fetal Brain Female brain
27 chr5:80932200-80952000 Weak transcription Fetal Muscle Trunk muscle
28 chr5:80932200-80952200 Weak transcription Fetal Muscle Leg muscle
29 chr5:80932200-80952800 Weak transcription Adipose Nuclei Adipose
30 chr5:80932400-80942600 Weak transcription Primary B cells from peripheral blood blood
31 chr5:80932400-80963000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr5:80932800-80940200 Weak transcription Primary B cells from cord blood blood
33 chr5:80932800-80947400 Weak transcription Primary T cells from cord blood blood
34 chr5:80933000-80944200 Weak transcription Thymus Thymus
35 chr5:80935000-80945600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr5:80935200-80941800 Weak transcription Primary hematopoietic stem cells blood
37 chr5:80935400-80949400 Weak transcription HSMMtube muscle
38 chr5:80935600-80943200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:80935600-80947600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr5:80935800-80946800 Weak transcription HSMM muscle
41 chr5:80935800-80951800 Weak transcription NHDF-Ad bronchial
42 chr5:80936000-80943200 Weak transcription Osteobl bone
43 chr5:80936000-80951600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr5:80936200-80939600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr5:80937000-80940400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:80937000-80944600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr5:80937200-80940800 Genic enhancers Dnd41 blood
48 chr5:80938200-80946600 Weak transcription Colon Smooth Muscle Colon
49 chr5:80938600-80945800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr5:80938800-80940400 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015