Variant report

Variant nsv427757
Chromosome Location chr6:54296552-54507210
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:212 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:54292000-54297000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
2 chr6:54293800-54296600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr6:54295200-54297000 Enhancers NHDF-Ad bronchial
4 chr6:54295600-54296800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
5 chr6:54295600-54296800 Enhancers NHLF lung
6 chr6:54296000-54296800 Enhancers Osteobl bone
7 chr6:54296000-54297000 Enhancers HUVEC blood vessel
8 chr6:54296200-54296800 Enhancers Muscle Satellite Cultured Cells --
9 chr6:54296400-54296600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr6:54296400-54297000 Enhancers GM12878-XiMat blood
11 chr6:54296400-54297600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr6:54296600-54296800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr6:54296600-54297000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:54296800-54297200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:54305200-54305600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr6:54305200-54306000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:54305400-54305800 Enhancers NHEK skin
18 chr6:54305400-54306000 Enhancers Esophagus oesophagus
19 chr6:54305800-54306000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr6:54306000-54307200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:54307200-54307400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:54309600-54310200 Enhancers Osteobl bone
23 chr6:54309800-54310200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr6:54310600-54311200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:54327800-54329000 Enhancers HSMMtube muscle
26 chr6:54328200-54328800 Enhancers H9 Cell Line embryonic stem cell
27 chr6:54328200-54328800 Enhancers NHEK skin
28 chr6:54328200-54329000 Enhancers HSMM muscle
29 chr6:54328400-54328800 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr6:54328400-54328800 Enhancers H1 Cell Line embryonic stem cell
31 chr6:54328400-54328800 Enhancers HUES48 Cell Line embryonic stem cell
32 chr6:54328400-54328800 Enhancers HUES6 Cell Line embryonic stem cell
33 chr6:54328400-54328800 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr6:54328400-54328800 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr6:54328400-54328800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:54328400-54329000 Enhancers HUES64 Cell Line embryonic stem cell
37 chr6:54328400-54329000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr6:54328800-54338200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr6:54329000-54338200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr6:54336400-54336600 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr6:54336400-54336600 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr6:54336600-54338400 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr6:54336600-54338600 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr6:54337000-54339800 Enhancers HUES48 Cell Line embryonic stem cell
45 chr6:54338200-54338600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:54338200-54338800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:54338200-54338800 Enhancers NHEK skin
48 chr6:54338200-54339000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:54338400-54338800 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr6:54338600-54339200 Enhancers H1 Cell Line embryonic stem cell

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