Variant report

Variant	nsv428221
Chromosome Location	chr9:110456613-110632324
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1933)
CpG islands
(count:549)
Chromatin interactive
region (count:134)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1933 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:110471164-110471378	K562	blood:	n/a	n/a
2	ARID3A	chr9:110514109-110514404	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:110556591-110557161	K562	blood:	n/a	n/a
4	ARID3A	chr9:110470328-110470577	K562	blood:	n/a	n/a
5	ARID3A	chr9:110546562-110547127	K562	blood:	n/a	n/a
6	ARID3A	chr9:110469926-110470091	K562	blood:	n/a	n/a
7	ARID3A	chr9:110517651-110517838	K562	blood:	n/a	n/a
8	ARID3A	chr9:110513042-110513261	HepG2	liver:	n/a	n/a
9	ATF1	chr9:110594691-110594773	K562	blood:	n/a	n/a
10	ATF1	chr9:110546536-110547286	K562	blood:	n/a	n/a
11	ATF1	chr9:110469802-110470706	K562	blood:	n/a	n/a
12	ATF1	chr9:110556589-110556942	K562	blood:	n/a	n/a
13	ATF2	chr9:110514078-110514380	GM12878	blood:	n/a	n/a
14	ATF3	chr9:110512046-110512442	K562	blood:	n/a	n/a
15	ATF3	chr9:110546652-110547206	K562	blood:	n/a	chr9:110546662-110546671
16	ATF3	chr9:110517258-110518158	HCT-116	colon:	n/a	n/a
17	BACH1	chr9:110501349-110501379	K562	blood:	n/a	n/a
18	BACH1	chr9:110556650-110556818	K562	blood:	n/a	n/a
19	BACH1	chr9:110546885-110547091	K562	blood:	n/a	n/a
20	BATF	chr9:110551304-110551525	GM12878	blood:	n/a	chr9:110551425-110551436
21	BATF	chr9:110578818-110579090	GM12878	blood:	n/a	n/a
22	BATF	chr9:110514153-110514460	GM12878	blood:	n/a	n/a
23	BHLHE40	chr9:110499128-110499318	K562	blood:	n/a	chr9:110499267-110499280 chr9:110499269-110499278 chr9:110499268-110499277 chr9:110499263-110499284 chr9:110499269-110499278
24	BHLHE40	chr9:110517729-110517782	K562	blood:	n/a	n/a
25	BHLHE40	chr9:110589669-110589918	GM12878	blood:	n/a	n/a
26	BHLHE40	chr9:110470012-110470031	K562	blood:	n/a	n/a
27	BHLHE40	chr9:110556688-110556945	K562	blood:	n/a	n/a
28	BHLHE40	chr9:110474810-110475039	K562	blood:	n/a	n/a
29	BHLHE40	chr9:110545581-110545583	K562	blood:	n/a	n/a
30	BHLHE40	chr9:110471212-110471464	K562	blood:	n/a	n/a
31	BHLHE40	chr9:110514015-110514467	GM12878	blood:	n/a	n/a
32	BHLHE40	chr9:110470409-110470656	K562	blood:	n/a	n/a
33	BHLHE40	chr9:110495836-110496195	K562	blood:	n/a	n/a
34	BHLHE40	chr9:110546524-110547210	K562	blood:	n/a	n/a
35	BHLHE40	chr9:110521752-110522019	GM12878	blood:	n/a	n/a
36	BHLHE40	chr9:110512037-110512378	K562	blood:	n/a	n/a
37	BHLHE40	chr9:110589595-110589946	K562	blood:	n/a	n/a
38	BRCA1	chr9:110511921-110512735	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr9:110512974-110513711	Hela-S3	cervix:	n/a	n/a
40	BRCA1	chr9:110514410-110514571	GM12878	blood:	n/a	n/a
41	BRCA1	chr9:110517475-110517975	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr9:110500590-110500991	Hela-S3	cervix:	n/a	n/a
43	BRCA1	chr9:110470047-110470131	Hela-S3	cervix:	n/a	n/a
44	CBX3	chr9:110535281-110535671	K562	blood:	n/a	n/a
45	CBX3	chr9:110517263-110518490	HCT-116	colon:	n/a	n/a
46	CBX3	chr9:110546335-110547315	K562	blood:	n/a	n/a
47	CBX3	chr9:110535329-110535592	K562	blood:	n/a	n/a
48	CBX3	chr9:110517285-110518360	HCT-116	colon:	n/a	n/a
49	CBX3	chr9:110514106-110514418	K562	blood:	n/a	n/a
50	CBX3	chr9:110617379-110617943	HCT-116	colon:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:110479374-110479424	HCF	heart:	n/a
2	chr9:110501986-110502036	NHBE	bronchial:	n/a
3	chr9:110479859-110479909	AG04450	lung:	fetal
4	chr9:110479374-110479424	AG09309	skin:	n/a
5	chr9:110478622-110478672	SKMC	muscle:	n/a
6	chr9:110501986-110502036	T-47D	breast:	n/a
7	chr9:110501986-110502036	IMR90	lung:	fetal
8	chr9:110595657-110595707	HepG2	liver:	n/a
9	chr9:110479374-110479424	RPTEC	kidney:	n/a
10	chr9:110479374-110479424	HAEpiC	amniotic membrane:	n/a
11	chr9:110501986-110502036	SK-N-SH	brain:	n/a
12	chr9:110456717-110456767	Caco-2	colon:	n/a
13	chr9:110495709-110495759	T-47D	breast:	n/a
14	chr9:110479859-110479909	NHDF-neo	bronchial:	n/a
15	chr9:110479859-110479909	Caco-2	colon:	n/a
16	chr9:110595657-110595707	ECC-1	luminal epithelium:	n/a
17	chr9:110478622-110478672	K562	blood:	n/a
18	chr9:110479859-110479909	SK-N-SH	brain:	n/a
19	chr9:110482541-110482591	NHBE	bronchial:	n/a
20	chr9:110572138-110572188	RPTEC	kidney:	n/a
21	chr9:110479859-110479909	Jurkat	blood:	n/a
22	chr9:110482541-110482591	Hepatocyte	liver:	n/a
23	chr9:110478622-110478672	T-47D	breast:	n/a
24	chr9:110572138-110572188	HNPCEpiC	eye:	n/a
25	chr9:110479859-110479909	MCF-7	breast:	n/a
26	chr9:110572138-110572188	PFSK-1	brain:	n/a
27	chr9:110572138-110572188	MCF-7	breast:	n/a
28	chr9:110572138-110572188	HCF	heart:	n/a
29	chr9:110482541-110482591	MCF-7	breast:	n/a
30	chr9:110495709-110495759	HEK293	kidney:	embryo
31	chr9:110495709-110495759	SK-N-SH_RA	brain:	n/a
32	chr9:110479374-110479424	MCF-7	breast:	n/a
33	chr9:110479859-110479909	HL-60	blood:	n/a
34	chr9:110456717-110456767	AG09319	gingival:	n/a
35	chr9:110482541-110482591	RPTEC	kidney:	n/a
36	chr9:110479859-110479909	NB4	blood:	n/a
37	chr9:110479859-110479909	HRE	kidney:	n/a
38	chr9:110456717-110456767	HPAEpiC	pulmonary alveolar:	n/a
39	chr9:110479374-110479424	LNCaP	prostate:	n/a
40	chr9:110482541-110482591	T-47D	breast:	n/a
41	chr9:110482541-110482591	GM12891	blood:	n/a
42	chr9:110479859-110479909	HMEC	breast:	n/a
43	chr9:110501986-110502036	AG04450	lung:	fetal
44	chr9:110479374-110479424	AG09319	gingival:	n/a
45	chr9:110478622-110478672	Hela-S3	cervix:	n/a
46	chr9:110479374-110479424	HL-60	blood:	n/a
47	chr9:110482541-110482591	HL-60	blood:	n/a
48	chr9:110495709-110495759	PrEC	prostate:	n/a
49	chr9:110595657-110595707	IMR90	lung:	fetal
50	chr9:110595657-110595707	Caco-2	colon:	n/a

(count:134 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:110251056..110253160-chr9:110562216..110564187,3	MCF-7	breast:
2	chr9:110629277..110632046-chr9:110633853..110635632,2	MCF-7	breast:
3	chr9:110555138..110557619-chr9:110574072..110576795,2	MCF-7	breast:
4	chr9:110568913..110570631-chr9:110577019..110578824,2	K562	blood:
5	chr9:110501617..110503212-chr9:110597427..110600005,2	MCF-7	breast:
6	chr9:110567185..110568006-chr9:110893143..110893808,2	MCF-7	breast:
7	chr9:110493820..110495597-chr9:110496777..110499007,2	MCF-7	breast:
8	chr9:110581379..110584001-chr9:110585798..110587746,2	MCF-7	breast:
9	chr9:110251154..110252819-chr9:110502244..110504957,2	MCF-7	breast:
10	chr9:110501530..110503176-chr9:110565296..110567173,2	MCF-7	breast:
11	chr3:187870942..187871803-chr9:110511912..110512583,2	Hela-S3	cervix:
12	chr9:110517673..110519483-chr9:110556820..110559158,2	MCF-7	breast:
13	chr9:110567284..110568093-chr9:110856235..110856858,2	MCF-7	breast:
14	chr9:110517822..110519331-chr9:110545952..110548715,2	MCF-7	breast:
15	chr9:110506724..110509091-chr9:110510279..110512249,3	K562	blood:
16	chr9:110496966..110498533-chr9:110500002..110502085,2	MCF-7	breast:
17	chr9:110496966..110498533-chr9:110500002..110502085,2	MCF-7	breast:
18	chr9:110241813..110245896-chr9:110516233..110519941,6	MCF-7	breast:
19	chr9:110503474..110505849-chr9:110510284..110512558,2	MCF-7	breast:
20	chr9:110514110..110515685-chr9:110517940..110519497,2	MCF-7	breast:
21	chr9:110250527..110252695-chr9:110535045..110537861,2	MCF-7	breast:
22	chr3:78745666..78746331-chr9:110465725..110466235,2	MCF-7	breast:
23	chr9:110519104..110521898-chr9:110561118..110562716,2	MCF-7	breast:
24	chr9:110500719..110502247-chr9:110502621..110504318,2	MCF-7	breast:
25	chr9:110498957..110503711-chr9:110512687..110515100,7	MCF-7	breast:
26	chr9:110566734..110569521-chr9:110571289..110574579,3	MCF-7	breast:
27	chr9:110481375..110484081-chr9:110485021..110487832,2	MCF-7	breast:
28	chr3:61734623..61736953-chr9:110522196..110523981,2	MCF-7	breast:
29	chr9:110250711..110253202-chr9:110580626..110582725,2	MCF-7	breast:
30	chr9:110575673..110578429-chr9:110580730..110583073,2	MCF-7	breast:
31	chr9:110519104..110521898-chr9:110561118..110562716,2	MCF-7	breast:
32	chr9:110581417..110583396-chr9:110584777..110586664,2	K562	blood:
33	chr9:110517869..110520249-chr9:110520374..110523594,3	MCF-7	breast:
34	chr9:110474296..110478291-chr9:110482419..110485310,3	MCF-7	breast:
35	chr9:110303652..110304451-chr9:110517319..110518238,3	MCF-7	breast:
36	chr9:110250411..110253754-chr9:110517545..110522378,7	MCF-7	breast:
37	chr9:110602271..110604876-chr9:110605539..110607176,2	MCF-7	breast:
38	chr9:110457652..110460089-chr9:110462350..110464750,2	MCF-7	breast:
39	chr9:110621480..110624216-chr9:110630588..110632376,2	MCF-7	breast:
40	chr9:110512265..110514860-chr9:110532289..110535140,2	K562	blood:
41	chr9:110493820..110495597-chr9:110496777..110499007,2	MCF-7	breast:
42	chr9:110265104..110267552-chr9:110465483..110467266,2	MCF-7	breast:
43	chr9:110303901..110304402-chr9:110567116..110568034,2	MCF-7	breast:
44	chr9:110503474..110505849-chr9:110510284..110512558,2	MCF-7	breast:
45	chr9:110303561..110304288-chr9:110567131..110567879,3	MCF-7	breast:
46	chr9:110564513..110566399-chr9:110575869..110577547,2	MCF-7	breast:
47	chr9:110619453..110621036-chr9:110623994..110625894,2	K562	blood:
48	chr9:110517869..110520249-chr9:110520374..110523594,3	MCF-7	breast:
49	chr9:110581417..110583396-chr9:110584777..110586664,2	K562	blood:
50	chr9:110265825..110268824-chr9:110567926..110570921,2	MCF-7	breast:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AL162389.1-1	chr9:110477692-110477768	XLOC_007824
2	lnc-RAD23B-15	chr9:110503471-110503542	NONHSAT133894
3	lnc-RAD23B-10	chr9:110574028-110574037	XLOC_007511
4	lnc-RAD23B-10	chr9:110572655-110572805	XLOC_007511
5	lnc-RAD23B-15	chr9:110504869-110505193	NONHSAT133894
6	lnc-AL162389.1-3	chr9:110573900-110574195	NONHSAT133897
7	lnc-RAD23B-10	chr9:110570350-110570412	XLOC_007511
8	lnc-AL162389.1-1	chr9:110477206-110477383	XLOC_007824

No data

Variant related genes	Relation type
ENSG00000214645	TF binding region
RN7SL659P	TF binding region
RNU6-1064P	TF binding region
RPL36AP6	TF binding region
ENSG00000233727	TF binding region
ENSG00000214645	CpG island
RN7SL659P	CpG island
RNU6-1064P	CpG island
RPL36AP6	CpG island
ENSG00000233727	CpG island
ENSG00000222558	chromatin interactions
ENSG00000214645	chromatin interactions
ENSG00000136826	chromatin interactions
ENSG00000233727	chromatin interactions
ENSG00000244104	chromatin interactions
ENSG00000145012	chromatin interactions
CPNE3	miRNA target sites
MLXIP	miRNA target sites
CPM	miRNA target sites
MMD	miRNA target sites
MLLT6	miRNA target sites

Extended variants
information (count: 6620 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:6620 , 50 per page) page: 1 2 3 4 5 6 7 ... 133

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567885064	chr9:110456648-110456649	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs535289768	chr9:110456688-110456689	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs553325902	chr9:110456697-110456698	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs147556557	chr9:110456717-110456718	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs79899121	chr9:110456718-110456719	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs557479301	chr9:110456818-110456819	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs954379	chr9:110456838-110456839	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs141993973	chr9:110456847-110456848	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs535938979	chr9:110456911-110456912	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs146130289	chr9:110457002-110457003	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs554269830	chr9:110457019-110457020	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs572486712	chr9:110457037-110457038	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs80042851	chr9:110457041-110457042	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs369120303	chr9:110457113-110457114	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs541300079	chr9:110457130-110457131	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs559172711	chr9:110457142-110457143	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs532953302	chr9:110457213-110457214	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs551121079	chr9:110457219-110457220	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs869374	chr9:110457258-110457259	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs7037177	chr9:110457284-110457285	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs189885166	chr9:110457287-110457288	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs541788860	chr9:110457319-110457320	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs7037196	chr9:110457332-110457333	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs1418947	chr9:110457333-110457334	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs571908005	chr9:110457335-110457336	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs151233867	chr9:110457378-110457379	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs557540903	chr9:110457463-110457464	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs569391430	chr9:110457469-110457470	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs536737267	chr9:110457500-110457501	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs554696253	chr9:110457609-110457610	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs573189311	chr9:110457612-110457613	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs541007641	chr9:110457639-110457640	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs562671486	chr9:110457643-110457644	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs552858857	chr9:110457710-110457711	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs574716379	chr9:110457715-110457716	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs543128904	chr9:110457729-110457730	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs140395514	chr9:110457767-110457768	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs544826945	chr9:110457770-110457771	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs561384827	chr9:110457782-110457783	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs563107684	chr9:110457783-110457784	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs371838191	chr9:110457807-110457808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs872523	chr9:110457812-110457813	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs872522	chr9:110457873-110457874	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs530508062	chr9:110457882-110457883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs5899749	chr9:110457883-110457884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs397774703	chr9:110457894-110457895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs560767894	chr9:110457903-110457904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs10816558	chr9:110457911-110457912	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs546576652	chr9:110457918-110457919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs571971475	chr9:110457921-110457922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Fukuyama congenital muscular dystrophy	21572526	CNVD
Testicular germ cell tumor	18059402	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1774 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110452200-110456800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr9:110455600-110457400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:110455800-110457000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr9:110455800-110457000	Enhancers	Osteobl	bone
5	chr9:110455800-110457200	Enhancers	Fetal Intestine Small	intestine
6	chr9:110455800-110457400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr9:110456000-110456800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr9:110456400-110457000	Enhancers	Fetal Intestine Large	intestine
9	chr9:110456400-110457400	Enhancers	Fetal Lung	lung
10	chr9:110456400-110457400	Weak transcription	Placenta	Placenta
11	chr9:110456400-110459200	Weak transcription	NHEK	skin
12	chr9:110456400-110463000	Weak transcription	Colon Smooth Muscle	Colon
13	chr9:110456600-110463000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr9:110456800-110457000	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr9:110456800-110457800	Enhancers	Primary monocytes fromperipheralblood	blood
16	chr9:110456800-110463000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr9:110457000-110457800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
18	chr9:110457400-110457600	Enhancers	Placenta	Placenta
19	chr9:110457400-110463000	Weak transcription	Fetal Lung	lung
20	chr9:110457800-110458800	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr9:110457800-110460000	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr9:110458800-110460400	Enhancers	Monocytes-CD14+_RO01746	blood
23	chr9:110459200-110459800	Enhancers	NHEK	skin
24	chr9:110459200-110461000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr9:110459400-110459600	Weak transcription	Esophagus	oesophagus
26	chr9:110459600-110459800	Enhancers	Esophagus	oesophagus
27	chr9:110459800-110460600	Weak transcription	Esophagus	oesophagus
28	chr9:110460000-110461400	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr9:110460400-110461200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
30	chr9:110460600-110461000	Enhancers	Esophagus	oesophagus
31	chr9:110460600-110461000	Enhancers	Gastric	stomach
32	chr9:110460800-110462000	Enhancers	Stomach Mucosa	stomach
33	chr9:110461000-110461200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr9:110461000-110463000	Weak transcription	Gastric	stomach
35	chr9:110461200-110461400	Enhancers	Monocytes-CD14+_RO01746	blood
36	chr9:110461200-110461600	Enhancers	Brain Germinal Matrix	brain
37	chr9:110461400-110461600	Enhancers	Sigmoid Colon	Sigmoid Colon
38	chr9:110461400-110462400	Weak transcription	Monocytes-CD14+_RO01746	blood
39	chr9:110461400-110462800	Weak transcription	Primary monocytes fromperipheralblood	blood
40	chr9:110461600-110462800	Weak transcription	Brain Germinal Matrix	brain
41	chr9:110462000-110465400	Weak transcription	Stomach Mucosa	stomach
42	chr9:110462400-110462800	Enhancers	Monocytes-CD14+_RO01746	blood
43	chr9:110462600-110463000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr9:110462800-110463000	Enhancers	Primary monocytes fromperipheralblood	blood
45	chr9:110462800-110463000	Enhancers	Primary hematopoietic stem cells	blood
46	chr9:110462800-110463000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr9:110462800-110463000	Enhancers	Brain Germinal Matrix	brain
48	chr9:110462800-110463000	Active TSS	Ovary	ovary
49	chr9:110462800-110463000	Enhancers	Skeletal Muscle Female	skeletal muscle
50	chr9:110462800-110463000	Enhancers	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links