Variant report

Variant	nsv430914
Chromosome Location	chr14:22390103-22975700
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:9609)
CpG islands
(count:3422)
Chromatin interactive
region (count:249)
LncRNA
region (count:118)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:9609 , 50 per page) page: 1 2 3 4 5 6 7 ... 193

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:22580003-22580242	K562	blood:	n/a	n/a
2	ARID3A	chr14:22765370-22765613	HepG2	liver:	n/a	n/a
3	ARID3A	chr14:22745215-22745415	K562	blood:	n/a	n/a
4	ARID3A	chr14:22694346-22694555	K562	blood:	n/a	n/a
5	ARID3A	chr14:22788290-22788588	HepG2	liver:	n/a	n/a
6	ARID3A	chr14:22855828-22856172	HepG2	liver:	n/a	n/a
7	ARID3A	chr14:22806380-22806660	K562	blood:	n/a	n/a
8	ARID3A	chr14:22552704-22553020	HepG2	liver:	n/a	n/a
9	ARID3A	chr14:22843636-22844115	HepG2	liver:	n/a	n/a
10	ARID3A	chr14:22446451-22446751	HepG2	liver:	n/a	n/a
11	ARID3A	chr14:22929121-22929887	K562	blood:	n/a	n/a
12	ARID3A	chr14:22942048-22942302	HepG2	liver:	n/a	n/a
13	ARID3A	chr14:22764524-22765035	HepG2	liver:	n/a	n/a
14	ARID3A	chr14:22801636-22802916	HepG2	liver:	n/a	n/a
15	ARID3A	chr14:22805545-22805762	K562	blood:	n/a	n/a
16	ARID3A	chr14:22932684-22932969	HepG2	liver:	n/a	n/a
17	ARID3A	chr14:22802474-22802855	K562	blood:	n/a	n/a
18	ARID3A	chr14:22804392-22804764	HepG2	liver:	n/a	n/a
19	ARID3A	chr14:22515400-22515690	HepG2	liver:	n/a	n/a
20	ARID3A	chr14:22579948-22580394	HepG2	liver:	n/a	n/a
21	ARID3A	chr14:22941997-22942327	K562	blood:	n/a	n/a
22	ATF1	chr14:22929425-22930088	K562	blood:	n/a	n/a
23	ATF1	chr14:22806344-22806684	K562	blood:	n/a	n/a
24	ATF1	chr14:22802422-22802769	K562	blood:	n/a	n/a
25	ATF1	chr14:22966819-22967082	K562	blood:	n/a	n/a
26	ATF1	chr14:22782653-22782949	K562	blood:	n/a	n/a
27	ATF1	chr14:22805143-22805343	K562	blood:	n/a	n/a
28	ATF1	chr14:22598192-22598259	K562	blood:	n/a	n/a
29	ATF1	chr14:22898045-22898340	K562	blood:	n/a	n/a
30	ATF1	chr14:22944053-22944079	K562	blood:	n/a	n/a
31	ATF1	chr14:22645817-22646098	K562	blood:	n/a	n/a
32	ATF2	chr14:22782586-22782996	GM12878	blood:	n/a	n/a
33	ATF2	chr14:22933087-22934275	GM12878	blood:	n/a	n/a
34	ATF2	chr14:22956958-22958121	GM12878	blood:	n/a	n/a
35	ATF2	chr14:22952938-22953638	GM12878	blood:	n/a	n/a
36	ATF2	chr14:22582661-22583009	GM12878	blood:	n/a	n/a
37	ATF2	chr14:22917031-22918320	GM12878	blood:	n/a	n/a
38	ATF2	chr14:22850800-22851197	GM12878	blood:	n/a	n/a
39	ATF2	chr14:22960628-22961954	GM12878	blood:	n/a	n/a
40	ATF2	chr14:22974313-22976870	GM12878	blood:	n/a	n/a
41	ATF2	chr14:22941742-22942380	GM12878	blood:	n/a	n/a
42	ATF2	chr14:22965462-22966426	GM12878	blood:	n/a	n/a
43	ATF2	chr14:22860192-22860789	GM12878	blood:	n/a	n/a
44	ATF2	chr14:22956719-22958641	GM12878	blood:	n/a	n/a
45	ATF2	chr14:22941903-22942467	GM12878	blood:	n/a	n/a
46	ATF2	chr14:22851242-22852700	GM12878	blood:	n/a	n/a
47	ATF2	chr14:22952266-22954843	GM12878	blood:	n/a	n/a
48	ATF2	chr14:22901371-22901993	GM12878	blood:	n/a	n/a
49	ATF2	chr14:22933150-22934304	GM12878	blood:	n/a	n/a
50	ATF2	chr14:22960395-22961625	GM12878	blood:	n/a	n/a

(count:3422 , 50 per page) page: 1 2 3 4 5 6 7 ... 69

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:22941183-22941233	GM12878	blood:	n/a
2	chr14:22694601-22694651	MCF-7	breast:	n/a
3	chr14:22965472-22965522	Caco-2	colon:	n/a
4	chr14:22924450-22924500	AG10803	skin:	n/a
5	chr14:22945457-22945507	HRE	kidney:	n/a
6	chr14:22573483-22573533	GM12892	blood:	n/a
7	chr14:22941183-22941233	GM12878	blood:	n/a
8	chr14:22694601-22694651	MCF-7	breast:	n/a
9	chr14:22965472-22965522	Caco-2	colon:	n/a
10	chr14:22924450-22924500	AG10803	skin:	n/a
11	chr14:22945457-22945507	HRE	kidney:	n/a
12	chr14:22573483-22573533	GM12892	blood:	n/a
13	chr14:22694601-22694651	NH-A	brain:	n/a
14	chr14:22968031-22968081	HepG2	liver:	n/a
15	chr14:22958399-22958449	PrEC	prostate:	n/a
16	chr14:22963867-22963917	U87	brain:	n/a
17	chr14:22953113-22953163	A549	lung:	n/a
18	chr14:22464528-22464578	MCF-7	breast:	n/a
19	chr14:22975248-22975298	HCPEpiC	choroid plexus:	n/a
20	chr14:22590704-22590754	ProgFib	skin:	n/a
21	chr14:22457536-22457586	HUVEC	blood vessel:	n/a
22	chr14:22590704-22590754	HIPEpiC	eye:	n/a
23	chr14:22973366-22973416	PANC-1	pancreas:	n/a
24	chr14:22971074-22971124	ovcar-3	ovarian:	n/a
25	chr14:22433693-22433743	AG04449	skin:	fetal
26	chr14:22470396-22470446	MCF10A-Er-Src	breast:	n/a
27	chr14:22890836-22890886	HRCEpiC	kidney:	n/a
28	chr14:22941183-22941233	Caco-2	colon:	n/a
29	chr14:22963867-22963917	Hepatocyte	liver:	n/a
30	chr14:22958402-22958452	HCF	heart:	n/a
31	chr14:22457536-22457586	NHDF-neo	bronchial:	n/a
32	chr14:22965472-22965522	PrEC	prostate:	n/a
33	chr14:22464528-22464578	PFSK-1	brain:	n/a
34	chr14:22958399-22958449	ProgFib	skin:	n/a
35	chr14:22958402-22958452	BJ	skin:	n/a
36	chr14:22963867-22963917	HL-60	blood:	n/a
37	chr14:22975521-22975571	GM19239	blood:	n/a
38	chr14:22958402-22958452	GM12878	blood:	n/a
39	chr14:22890836-22890886	HL-60	blood:	n/a
40	chr14:22464528-22464578	AG09309	skin:	n/a
41	chr14:22573483-22573533	AG09319	gingival:	n/a
42	chr14:22969695-22969745	IMR90	lung:	fetal
43	chr14:22971114-22971164	PrEC	prostate:	n/a
44	chr14:22689870-22689920	AG04450	lung:	fetal
45	chr14:22917797-22917847	GM12891	blood:	n/a
46	chr14:22973366-22973416	AG09309	skin:	n/a
47	chr14:22924450-22924500	GM12891	blood:	n/a
48	chr14:22465676-22465726	HRCEpiC	kidney:	n/a
49	chr14:22392573-22392623	AG04450	lung:	fetal
50	chr14:22925659-22925709	GM12892	blood:	n/a

(count:249 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr14:22802938..22805139-chr14:22807114..22809832,2	MCF-7	breast:
2	chr14:22729687..22734778-chr14:22736945..22742365,6	MCF-7	breast:
3	chr14:22694156..22694958-chr14:22744677..22745780,4	MCF-7	breast:
4	chr14:22860207..22860973-chr14:22940190..22940778,2	MCF-7	breast:
5	chr14:22753988..22755736-chr14:22757103..22759788,3	MCF-7	breast:
6	chr14:22753988..22755736-chr14:22757103..22759788,3	MCF-7	breast:
7	chr14:22735413..22737011-chr14:22760439..22762105,2	MCF-7	breast:
8	chr14:22589867..22590646-chr14:22668679..22669664,2	MCF-7	breast:
9	chr14:22616091..22617610-chr14:22629466..22631818,2	MCF-7	breast:
10	chr14:22615286..22617241-chr14:22632058..22634012,2	MCF-7	breast:
11	chr14:22862824..22864416-chr14:22864446..22866192,2	K562	blood:
12	chr14:22925448..22927868-chr14:22935775..22938181,2	K562	blood:
13	chr14:22855474..22856704-chr14:22940182..22941140,3	MCF-7	breast:
14	chr14:22855187..22856831-chr14:22940403..22942618,16	MCF-7	breast:
15	chr14:22733523..22738526-chr14:22739663..22742624,5	MCF-7	breast:
16	chr14:22731055..22733382-chr14:22733531..22735627,2	K562	blood:
17	chr14:22632562..22633124-chr4:143395110..143395748,2	MCF-7	breast:
18	chr14:22801044..22802693-chr14:22811602..22813674,2	MCF-7	breast:
19	chr14:22915908..22917550-chr14:22929297..22931083,2	MCF-7	breast:
20	chr14:22870770..22873189-chr14:22873992..22876321,2	MCF-7	breast:
21	chr14:22576595..22577233-chr14:22632218..22632722,2	MCF-7	breast:
22	chr14:22688367..22691201-chr14:22731721..22733853,2	MCF-7	breast:
23	chr14:22694063..22694786-chr14:22843764..22844271,2	MCF-7	breast:
24	chr14:22951235..22953629-chr14:22968209..22970996,2	K562	blood:
25	chr14:22643970..22646253-chr14:22648103..22650894,3	MCF-7	breast:
26	chr14:22634997..22636619-chr14:22639097..22641198,2	MCF-7	breast:
27	chr14:22776089..22777923-chr14:22781026..22782759,2	MCF-7	breast:
28	chr14:22623510..22625171-chr14:22630189..22631705,2	MCF-7	breast:
29	chr14:22758101..22760043-chr14:22761332..22763107,2	MCF-7	breast:
30	chr14:22771296..22772075-chr14:22855754..22856468,3	K562	blood:
31	chr14:22862824..22864416-chr14:22864446..22866192,2	K562	blood:
32	chr14:22668551..22669387-chr14:22782298..22783291,2	MCF-7	breast:
33	chr14:22860207..22860973-chr14:22940190..22940778,2	MCF-7	breast:
34	chr14:22552725..22554234-chr14:22566980..22569566,2	MCF-7	breast:
35	chr11:62609117..62609718-chr14:22554611..22555131,5	HCT-116	colon:
36	chr14:22859945..22860757-chr2:237074141..237074661,2	K562	blood:
37	chr14:22889818..22890340-chr14:22940326..22941150,2	MCF-7	breast:
38	chr14:22746753..22748555-chr14:23355124..23357041,2	MCF-7	breast:
39	chr14:22870770..22873189-chr14:22873992..22876321,2	MCF-7	breast:
40	chr14:22761241..22764027-chr14:22764185..22767099,2	MCF-7	breast:
41	chr14:22942056..22942567-chr14:23039073..23039709,2	MCF-7	breast:
42	chr14:22788216..22788935-chr14:22802248..22802793,2	MCF-7	breast:
43	chr14:22947247..22950905-chr14:22956148..22958561,3	K562	blood:
44	chr14:22456066..22456795-chr14:22568285..22568890,2	K562	blood:
45	chr14:22552725..22554234-chr14:22566980..22569566,2	MCF-7	breast:
46	chr14:22381710..22382649-chr14:22401797..22402492,3	MCF-7	breast:
47	chr14:22859926..22861319-chr14:22941648..22942634,9	MCF-7	breast:
48	chr14:22771659..22772159-chr14:22782640..22783274,2	MCF-7	breast:
49	chr14:22732657..22736897-chr14:22755931..22759473,4	MCF-7	breast:
50	chr14:22759513..22761832-chr14:22763808..22765631,2	MCF-7	breast:

(count:118 , 50 per page) page: 1 2 3

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AE000662.92.1-10	chr14:22392607-22392811	NONHSAT035715
2	lnc-DAD1-2	chr14:22869445-22869575	ENSG00000251002
3	lnc-OR10G2-10	chr14:22563724-22563978	expReg_chr14_828_-
4	lnc-DAD1-5	chr14:22631526-22631754	NONHSAT035758
5	lnc-OR10G2-7	chr14:22432255-22433844	l_935_chr14:22432254-22434316_brain
6	lnc-AE000662.92.1-10	chr14:22958475-22958531	NONHSAT035737
7	lnc-OR4E2-9	chr14:22564302-22564393	NONHSAT035752
8	lnc-OR4E2-9	chr14:22564763-22564894	NONHSAT035753
9	lnc-AE000662.92.1-8	chr14:22645469-22645761	NONHSAT035759
10	lnc-OR10G2-6	chr14:22431047-22431270	NONHSAT035723
11	lnc-AE000662.92.1-10	chr14:22466181-22466398	NONHSAT035727
12	lnc-AE000662.92.1-10	chr14:22466247-22466411	NONHSAT035744
13	lnc-DAD1-2	chr14:22951842-22951948	ENSG00000251002
14	lnc-AE000662.92.1-10	chr14:22539277-22539475	NONHSAT035751
15	lnc-AE000662.92.1-9	chr14:22623012-22623063	NONHSAT035757
16	lnc-AE000662.92.1-10	chr14:22955210-22955292	NONHSAT035713
17	lnc-AE000662.92.1-10	chr14:22963805-22963876	NONHSAT035709
18	lnc-DAD1-2	chr14:22872095-22872164	ENSG00000251002
19	lnc-AE000662.92.1-10	chr14:22958475-22958531	NONHSAT035716
20	lnc-OR10G2-9	chr14:22518799-22519031	expReg_chr14_765_-
21	lnc-AE000662.92.1-7	chr14:22653458-22653511	NONHSAT035760
22	lnc-DAD1-2	chr14:22869445-22869575	ENSG00000251002
23	lnc-AE000662.92.1-2	chr14:22886826-22886962	ENSG00000259042.1
24	lnc-DAD1-2	chr14:22953008-22953424	NONHSAT035774
25	lnc-OR4E2-9	chr14:22564599-22564896	NONHSAT035752
26	lnc-DAD1-2	chr14:22850754-22850808	ENSG00000251002
27	lnc-DAD1-2	chr14:22850513-22850808	ENSG00000251002
28	lnc-AE000662.92.1-10	chr14:22958473-22958555	NONHSAT035742
29	lnc-AE000662.92.1-10	chr14:22466246-22466413	NONHSAT035743
30	lnc-DAD1-2	chr14:22901658-22901731	ENSG00000251002
31	lnc-OR10G2-7	chr14:22434299-22434316	l_935_chr14:22432254-22434316_brain
32	lnc-OR4E2-8	chr14:22521802-22522130	l_936_chr14:22521733-22524438_thyroid
33	lnc-DAD1-2	chr14:22872095-22872164	ENSG00000251002
34	lnc-AE000662.92.1-2	chr14:22887328-22887645	ENSG00000259042.1
35	lnc-AE000662.92.1-10	chr14:22968683-22968732	NONHSAT035744
36	lnc-DAD1-2	chr14:22850754-22850808	ENSG00000251002
37	lnc-AE000662.92.1-10	chr14:22466242-22466395	NONHSAT035739
38	lnc-OR4E2-6	chr14:22434001-22434123	NONHSAT035724
39	lnc-OR4E2-8	chr14:22522131-22522790	l_936_chr14:22521733-22524438_thyroid
40	lnc-AE000662.92.1-10	chr14:22392628-22392831	NONHSAT035716
41	lnc-DAD1-2	chr14:22950230-22950347	ENSG00000251002
42	lnc-AE000662.92.1-10	chr14:22466246-22466398	NONHSAT035742
43	lnc-AE000662.92.1-4	chr14:22847278-22847492	expReg_chr14_531_+
44	lnc-AE000662.92.1-5	chr14:22733858-22734147	NONHSAT035763
45	lnc-DAD1-2	chr14:22929014-22930299	NONHSAT035772
46	lnc-AE000662.92.1-10	chr14:22458751-22458780	NONHSAT035725
47	lnc-AE000662.92.1-10	chr14:22466181-22466398	NONHSAT035728
48	lnc-AE000662.92.1-10	chr14:22466125-22466413	NONHSAT035726
49	lnc-DAD1-2	chr14:22901658-22901731	ENSG00000251002
50	lnc-AE000662.92.1-6	chr14:22658319-22658607	NONHSAT035761

No data

Variant related genes	Relation type
TRAJ35	TF binding region
TRAV33	TF binding region
TRAV8-7	TF binding region
TRAJ44	TF binding region
TRAV41	TF binding region
TRAJ33	TF binding region
TRAV26-1	TF binding region
TRDD2	TF binding region
ENSG00000238634	TF binding region
TRAV23DV6	TF binding region
TRDV1	TF binding region
TRAJ52	TF binding region
TRAJ37	TF binding region
ENSG00000258557	TF binding region
TRAJ31	TF binding region
TRAJ51	TF binding region
TRDD3	TF binding region
ENSG00000258705	TF binding region
TRDV3	TF binding region
TRAV9-2	TF binding region
TRAV38-1	TF binding region
TRAJ39	TF binding region
TRAJ43	TF binding region
TRAJ49	TF binding region
TRAV12-3	TF binding region
TRAJ55	TF binding region
TRAJ36	TF binding region
TRAJ32	TF binding region
TRAJ45	TF binding region
TRAV8-6	TF binding region
TRAJ56	TF binding region
TRAJ48	TF binding region
TRAV34	TF binding region
TRAJ54	TF binding region
TRAV32	TF binding region
TRAJ61	TF binding region
TRAV15	TF binding region
TRAV40	TF binding region
TRAV37	TF binding region
TRDV2	TF binding region
TRAJ50	TF binding region
TRDJ2	TF binding region
TRAV25	TF binding region
TRAJ42	TF binding region
TRDD1	TF binding region
TRAV19	TF binding region
TRDJ1	TF binding region
TRAV39	TF binding region
TRAJ34	TF binding region
TRAJ38	TF binding region
TRAV38-2DV8	TF binding region
TRDJ3	TF binding region
TRAJ57	TF binding region
TRAV24	TF binding region
TRAV30	TF binding region
ENSG00000256221	TF binding region
TRAV36DV7	TF binding region
TRAV17	TF binding region
TRAJ58	TF binding region
TRAV21	TF binding region
TRAV18	TF binding region
TRAJ41	TF binding region
TRAV14DV4	TF binding region
TRAV20	TF binding region
TRAV31	TF binding region
TRAV16	TF binding region
ENSG00000251002	TF binding region
TRDJ4	TF binding region
TRAV26-2	TF binding region
TRAJ47	TF binding region
TRAV22	TF binding region
TRAJ59	TF binding region
ENSG00000259042	TF binding region
TRAJ46	TF binding region
TRAJ60	TF binding region
TRAJ40	TF binding region
TRAV28	TF binding region
TRAV35	TF binding region
TRDC	TF binding region
TRAV27	TF binding region
TRAV29DV5	TF binding region
TRAJ53	TF binding region
TRAJ35	CpG island
TRAV33	CpG island
TRAV8-7	CpG island
TRAJ44	CpG island
TRAV41	CpG island
TRAJ33	CpG island
TRAV26-1	CpG island
TRDD2	CpG island
ENSG00000238634	CpG island
TRAV23DV6	CpG island
TRDV1	CpG island
TRAJ52	CpG island
TRAJ37	CpG island
ENSG00000258557	CpG island
TRAJ31	CpG island
TRAJ51	CpG island
TRDD3	CpG island
ENSG00000258705	CpG island
TRDV3	CpG island
TRAV9-2	CpG island
TRAV38-1	CpG island
TRAJ39	CpG island
TRAJ43	CpG island
TRAJ49	CpG island
TRAV12-3	CpG island
TRAJ55	CpG island
TRAJ36	CpG island
TRAJ32	CpG island
TRAJ45	CpG island
TRAV8-6	CpG island
TRAJ56	CpG island
TRAJ48	CpG island
TRAV34	CpG island
TRAJ54	CpG island
TRAV32	CpG island
TRAJ61	CpG island
TRAV15	CpG island
TRAV40	CpG island
TRAV37	CpG island
TRDV2	CpG island
TRAJ50	CpG island
TRDJ2	CpG island
TRAV25	CpG island
TRAJ42	CpG island
TRDD1	CpG island
TRAV19	CpG island
TRDJ1	CpG island
TRAV39	CpG island
TRAJ34	CpG island
TRAJ38	CpG island
TRAV38-2DV8	CpG island
TRDJ3	CpG island
TRAJ57	CpG island
TRAV24	CpG island
TRAV30	CpG island
ENSG00000256221	CpG island
TRAV36DV7	CpG island
TRAV17	CpG island
TRAJ58	CpG island
TRAV21	CpG island
TRAV18	CpG island
TRAJ41	CpG island
TRAV14DV4	CpG island
TRAV20	CpG island
TRAV31	CpG island
TRAV16	CpG island
ENSG00000251002	CpG island
TRDJ4	CpG island
TRAV26-2	CpG island
TRAJ47	CpG island
TRAV22	CpG island
TRAJ59	CpG island
ENSG00000259042	CpG island
TRAJ46	CpG island
TRAJ60	CpG island
TRAJ40	CpG island
TRAV28	CpG island
TRAV35	CpG island
TRDC	CpG island
TRAV27	CpG island
TRAV29DV5	CpG island
TRAJ53	CpG island
ENSG00000133316	chromatin interactions
ENSG00000256590	chromatin interactions
ENSG00000211819	chromatin interactions
ENSG00000211807	chromatin interactions
ENSG00000211788	chromatin interactions
ENSG00000236383	chromatin interactions
ENSG00000248366	chromatin interactions
ENSG00000211856	chromatin interactions
ENSG00000211796	chromatin interactions
ENSG00000250688	chromatin interactions
ENSG00000211829	chromatin interactions
ENSG00000249446	chromatin interactions
ENSG00000212335	chromatin interactions
ENSG00000237235	chromatin interactions
ENSG00000211780	chromatin interactions
ENSG00000259092	chromatin interactions
ENSG00000211834	chromatin interactions
ENSG00000211816	chromatin interactions
ENSG00000211837	chromatin interactions
ENSG00000211849	chromatin interactions
ENSG00000211836	chromatin interactions
ENSG00000211850	chromatin interactions
ENSG00000258905	chromatin interactions
ENSG00000249048	chromatin interactions
ENSG00000211835	chromatin interactions
ENSG00000211804	chromatin interactions
ENSG00000211798	chromatin interactions
ENSG00000211818	chromatin interactions
ENSG00000109452	chromatin interactions
ENSG00000211840	chromatin interactions
ENSG00000211800	chromatin interactions
ENSG00000211832	chromatin interactions
ENSG00000092203	chromatin interactions
ENSG00000259054	chromatin interactions
ENSG00000211820	chromatin interactions
ENSG00000251002	chromatin interactions
ENSG00000211802	chromatin interactions
ENSG00000211809	chromatin interactions
ENSG00000211814	chromatin interactions
ENSG00000222414	chromatin interactions
ENSG00000211795	chromatin interactions
ENSG00000258705	chromatin interactions
ENSG00000211812	chromatin interactions
ENSG00000211815	chromatin interactions
ENSG00000211857	chromatin interactions
ENSG00000129472	chromatin interactions
ENSG00000256221	chromatin interactions
ENSG00000211797	chromatin interactions
ENSG00000211791	chromatin interactions
ENSG00000223997	chromatin interactions
ENSG00000211827	chromatin interactions
ENSG00000211817	chromatin interactions
ENSG00000211831	chromatin interactions
ENSG00000211810	chromatin interactions
ENSG00000211851	chromatin interactions
ENSG00000259068	chromatin interactions
ENSG00000211803	chromatin interactions
ENSG00000211839	chromatin interactions
ENSG00000223247	chromatin interactions
LSM1	miRNA target sites
CACNB2	miRNA target sites
MREG	miRNA target sites
ELOVL4	miRNA target sites
RPS6KA6	miRNA target sites
RASGRP3	miRNA target sites
CCNE1	miRNA target sites
RB1	miRNA target sites
HSPA1L	miRNA target sites
ARID4B	miRNA target sites
DPY19L3	miRNA target sites
GPAM	miRNA target sites
BCL2	miRNA target sites
CCL20	miRNA target sites
GRB10	miRNA target sites
MYT1	miRNA target sites
CNOT4	miRNA target sites
ZFAND5	miRNA target sites
RECK	miRNA target sites
KPNA2	miRNA target sites

Extended variants
information (count: 23097 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:23097 , 50 per page) page: 1 2 3 4 5 6 7 ... 462

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4981390	chr14:22390103-22390104	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs529653187	chr14:22390111-22390112	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs186428334	chr14:22390117-22390118	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs191847699	chr14:22390138-22390139	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs12587146	chr14:22390185-22390186	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs530421992	chr14:22390205-22390206	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs551707913	chr14:22390217-22390218	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs4981391	chr14:22390227-22390228	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs183447297	chr14:22390277-22390278	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs188113396	chr14:22390283-22390284	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs561444523	chr14:22390299-22390300	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs115231335	chr14:22390355-22390356	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs192741211	chr14:22390384-22390385	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs182691167	chr14:22390422-22390423	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs186685945	chr14:22390446-22390447	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564061252	chr14:22390448-22390449	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs532809840	chr14:22390464-22390465	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs148848145	chr14:22390481-22390482	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs12432727	chr14:22390505-22390506	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs556968228	chr14:22390518-22390519	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs114944523	chr14:22390525-22390526	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566168847	chr14:22390585-22390586	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs146865483	chr14:22390659-22390660	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs558307159	chr14:22390662-22390663	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs577936260	chr14:22390687-22390688	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs12432785	chr14:22390744-22390745	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs557611274	chr14:22390753-22390754	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs75787486	chr14:22390756-22390757	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs542805312	chr14:22390762-22390763	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs370706256	chr14:22390813-22390814	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs17255126	chr14:22390816-22390817	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs376949805	chr14:22390847-22390848	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs74035429	chr14:22390858-22390859	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs17255133	chr14:22390866-22390867	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs376231707	chr14:22390909-22390910	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs10483264	chr14:22390919-22390920	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs532923743	chr14:22390941-22390942	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs386775452	chr14:22390999-22391000	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs28595549	chr14:22391008-22391009	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs558765749	chr14:22391012-22391013	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs191553343	chr14:22391034-22391035	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs184869195	chr14:22391098-22391099	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs529243802	chr14:22391137-22391138	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs28603302	chr14:22391191-22391192	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs565852262	chr14:22391208-22391209	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs386775453	chr14:22391358-22391359	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs368090064	chr14:22391359-22391360	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs723879	chr14:22391433-22391434	Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs537453382	chr14:22391438-22391439	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs567466245	chr14:22391459-22391460	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Cancer	20164920	CNVD
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cone-rod dystrophy	18421352	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	21482944	CNVD
Mental retardation	19951919	CNVD
Neuroblastoma	21899760	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Heart disease	21282601	CNVD
Esophageal cancer	20955586	CNVD
Neurodevelopmental disorder	22521361	CNVD
Lung cancer	16773561	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17440070	CNVD
Breast cancer	16272173	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Epilepsy	20736978	CNVD
Mental retardation	20736978	CNVD
severe speech impairment	20736978	CNVD
speech impairment	20736978	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
Barrett''s syndrome	19417022	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21865298	CNVD
Breast cancer	21509527	CNVD
Ovarian cancer	21781307	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:5502 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:22386800-22391200	Weak transcription	Primary B cells from peripheral blood	blood
2	chr14:22386800-22391200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr14:22387000-22392000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr14:22387200-22391600	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr14:22387400-22391400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr14:22388000-22390200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr14:22388000-22390400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr14:22388000-22391200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr14:22388000-22391400	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr14:22388000-22391400	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr14:22388000-22391400	Weak transcription	Fetal Thymus	thymus
12	chr14:22388200-22391000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr14:22388200-22391400	Weak transcription	HUVEC	blood vessel
14	chr14:22388400-22391000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr14:22388800-22390200	Weak transcription	Primary T cells from cord blood	blood
16	chr14:22388800-22391400	Weak transcription	Thymus	Thymus
17	chr14:22389200-22390800	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr14:22389200-22395200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr14:22389600-22390200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr14:22389800-22391000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
21	chr14:22390000-22390200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr14:22390000-22390800	Enhancers	Primary T killer memory cells from peripheral blood	blood
23	chr14:22390200-22392200	Enhancers	Primary T cells from cord blood	blood
24	chr14:22390200-22392200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
25	chr14:22390200-22392600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
26	chr14:22390400-22392000	Enhancers	Primary B cells from cord blood	blood
27	chr14:22390400-22392200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr14:22390800-22391200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr14:22390800-22392200	Enhancers	Primary T helper cells fromperipheralblood	blood
30	chr14:22391000-22391800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr14:22391000-22392200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
32	chr14:22391000-22392400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr14:22391200-22392200	Enhancers	Primary hematopoietic stem cells short term culture	blood
34	chr14:22391200-22392400	Enhancers	Primary B cells from peripheral blood	blood
35	chr14:22391200-22392400	Enhancers	Primary hematopoietic stem cells	blood
36	chr14:22391200-22392400	Enhancers	Primary T killer memory cells from peripheral blood	blood
37	chr14:22391200-22392400	Enhancers	Dnd41	blood
38	chr14:22391400-22392200	Enhancers	Primary T cells fromperipheralblood	blood
39	chr14:22391400-22392200	Enhancers	Thymus	Thymus
40	chr14:22391400-22392400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
41	chr14:22391400-22392400	Enhancers	Fetal Thymus	thymus
42	chr14:22391400-22392600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr14:22391400-22393200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr14:22391400-22393400	Enhancers	HUVEC	blood vessel
45	chr14:22391600-22392800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
46	chr14:22391800-22393200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr14:22392000-22392800	Flanking Active TSS	Primary B cells from cord blood	blood
48	chr14:22392000-22392800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
49	chr14:22392000-22393000	Enhancers	Primary neutrophils fromperipheralblood	blood
50	chr14:22392200-22392600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links