Variant report
Variant | nsv442265 |
---|---|
Chromosome Location | chr12:34314961-34803046 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2538)
- CpG islands (count:11432)
- Chromatin interactive region (count:58)
- LncRNA region (count:5)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr12:34417095-34417295 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr12:34372445-34372838 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr12:34367118-34367148 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr12:34407159-34407233 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr12:34372443-34372838 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr12:34430831-34430993 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr12:34340026-34340130 | K562 | blood: | n/a | n/a |
8 | ATF3 | chr12:34509280-34509455 | K562 | blood: | n/a | n/a |
9 | ATF3 | chr12:34372504-34372902 | A549 | lung: | n/a | n/a |
10 | ATF3 | chr12:34372398-34372788 | A549 | lung: | n/a | n/a |
11 | ATF3 | chr12:34509237-34509520 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr12:34429537-34429559 | K562 | blood: | n/a | n/a |
13 | BACH1 | chr12:34428886-34428914 | K562 | blood: | n/a | n/a |
14 | BACH1 | chr12:34417965-34418172 | K562 | blood: | n/a | n/a |
15 | BACH1 | chr12:34500299-34500489 | K562 | blood: | n/a | n/a |
16 | BACH1 | chr12:34429857-34430227 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr12:34369832-34370042 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr12:34486593-34486711 | K562 | blood: | n/a | n/a |
19 | BACH1 | chr12:34489607-34489683 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr12:34417075-34417361 | K562 | blood: | n/a | n/a |
21 | BATF | chr12:34575259-34575544 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr12:34374801-34375081 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr12:34575360-34575508 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr12:34387277-34387522 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr12:34372475-34372720 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr12:34785610-34785823 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr12:34575364-34575543 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr12:34367954-34368142 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr12:34575348-34575583 | GM12878 | blood: | n/a | n/a |
30 | BCL3 | chr12:34372532-34372732 | GM12878 | blood: | n/a | n/a |
31 | BCL3 | chr12:34372500-34372832 | A549 | lung: | n/a | n/a |
32 | BCLAF1 | chr12:34372504-34372752 | GM12878 | blood: | n/a | n/a |
33 | BHLHE40 | chr12:34428714-34428914 | K562 | blood: | n/a | n/a |
34 | BHLHE40 | chr12:34417073-34417446 | K562 | blood: | n/a | n/a |
35 | BHLHE40 | chr12:34417796-34417999 | K562 | blood: | n/a | n/a |
36 | BHLHE40 | chr12:34509153-34509543 | K562 | blood: | n/a | n/a |
37 | BHLHE40 | chr12:34645482-34645650 | HepG2 | liver: | n/a | n/a |
38 | BHLHE40 | chr12:34575344-34575524 | HepG2 | liver: | n/a | n/a |
39 | BHLHE40 | chr12:34488959-34488987 | K562 | blood: | n/a | n/a |
40 | BHLHE40 | chr12:34357708-34357899 | K562 | blood: | n/a | n/a |
41 | BHLHE40 | chr12:34501989-34502240 | K562 | blood: | n/a | n/a |
42 | BHLHE40 | chr12:34544817-34545121 | K562 | blood: | n/a | n/a |
43 | BHLHE40 | chr12:34371217-34371696 | K562 | blood: | n/a | n/a |
44 | BHLHE40 | chr12:34429855-34430232 | K562 | blood: | n/a | n/a |
45 | BHLHE40 | chr12:34503265-34503867 | K562 | blood: | n/a | chr12:34503364-34503380 |
46 | BHLHE40 | chr12:34494224-34494316 | K562 | blood: | n/a | n/a |
47 | BHLHE40 | chr12:34501108-34501225 | K562 | blood: | n/a | n/a |
48 | BHLHE40 | chr12:34372453-34372844 | K562 | blood: | n/a | n/a |
49 | BHLHE40 | chr12:34489695-34490283 | K562 | blood: | n/a | chr12:34490108-34490124 |
50 | BHLHE40 | chr12:34499008-34499021 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:34534365-34534415 | HIPEpiC | eye: | n/a |
2 | chr12:34478161-34478211 | HAEpiC | amniotic membrane: | n/a |
3 | chr12:34456631-34456681 | HepG2 | liver: | n/a |
4 | chr12:34446240-34446290 | SK-N-SH_RA | brain: | n/a |
5 | chr12:34756440-34756490 | AG09309 | skin: | n/a |
6 | chr12:34500640-34500690 | CMK | blood: | n/a |
7 | chr12:34503176-34503226 | GM12891 | blood: | n/a |
8 | chr12:34495086-34495136 | HNPCEpiC | eye: | n/a |
9 | chr12:34441774-34441824 | GM06990 | blood: | n/a |
10 | chr12:34318704-34318754 | U87 | brain: | n/a |
11 | chr12:34547337-34547387 | SK-N-MC | brain: | n/a |
12 | chr12:34481883-34481933 | ECC-1 | luminal epithelium: | n/a |
13 | chr12:34493996-34494046 | AG10803 | skin: | n/a |
14 | chr12:34753970-34754020 | ovcar-3 | ovarian: | n/a |
15 | chr12:34554116-34554166 | HCPEpiC | choroid plexus: | n/a |
16 | chr12:34506462-34506512 | SKMC | muscle: | n/a |
17 | chr12:34511504-34511554 | HL-60 | blood: | n/a |
18 | chr12:34471260-34471310 | SK-N-SH | brain: | n/a |
19 | chr12:34361865-34361915 | HRE | kidney: | n/a |
20 | chr12:34367670-34367720 | H1-hESC | embryonic stem cell: | embryo |
21 | chr12:34528253-34528303 | AG04449 | skin: | fetal |
22 | chr12:34556037-34556087 | HEK293 | kidney: | embryo |
23 | chr12:34527230-34527280 | HRE | kidney: | n/a |
24 | chr12:34493996-34494046 | RPTEC | kidney: | n/a |
25 | chr12:34444336-34444386 | AG10803 | skin: | n/a |
26 | chr12:34534365-34534415 | HIPEpiC | eye: | n/a |
27 | chr12:34478161-34478211 | HAEpiC | amniotic membrane: | n/a |
28 | chr12:34456631-34456681 | HepG2 | liver: | n/a |
29 | chr12:34446240-34446290 | SK-N-SH_RA | brain: | n/a |
30 | chr12:34756440-34756490 | AG09309 | skin: | n/a |
31 | chr12:34500640-34500690 | CMK | blood: | n/a |
32 | chr12:34503176-34503226 | GM12891 | blood: | n/a |
33 | chr12:34495086-34495136 | HNPCEpiC | eye: | n/a |
34 | chr12:34441774-34441824 | GM06990 | blood: | n/a |
35 | chr12:34318704-34318754 | U87 | brain: | n/a |
36 | chr12:34547337-34547387 | SK-N-MC | brain: | n/a |
37 | chr12:34481883-34481933 | ECC-1 | luminal epithelium: | n/a |
38 | chr12:34493996-34494046 | AG10803 | skin: | n/a |
39 | chr12:34753970-34754020 | ovcar-3 | ovarian: | n/a |
40 | chr12:34554116-34554166 | HCPEpiC | choroid plexus: | n/a |
41 | chr12:34506462-34506512 | SKMC | muscle: | n/a |
42 | chr12:34511504-34511554 | HL-60 | blood: | n/a |
43 | chr12:34471260-34471310 | SK-N-SH | brain: | n/a |
44 | chr12:34361865-34361915 | HRE | kidney: | n/a |
45 | chr12:34367670-34367720 | H1-hESC | embryonic stem cell: | embryo |
46 | chr12:34528253-34528303 | AG04449 | skin: | fetal |
47 | chr12:34556037-34556087 | HEK293 | kidney: | embryo |
48 | chr12:34527230-34527280 | HRE | kidney: | n/a |
49 | chr12:34493996-34494046 | RPTEC | kidney: | n/a |
50 | chr12:34444336-34444386 | AG10803 | skin: | n/a |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:34427757..34428277-chr16:33958747..33959470,2 | MCF-7 | breast: | |
2 | chr12:34544160..34546005-chr12:34547460..34549884,2 | K562 | blood: | |
3 | chr12:34480099..34482680-chr12:34485043..34486658,2 | K562 | blood: | |
4 | chr1:91852357..91853118-chr12:34372627..34373168,5 | MCF-7 | breast: | |
5 | chr12:34275776..34276287-chr12:34445928..34446780,2 | MCF-7 | breast: | |
6 | chr1:91851338..91852967-chr12:34372628..34374131,2 | K562 | blood: | |
7 | chr12:34497467..34501951-chr12:34506676..34509735,4 | K562 | blood: | |
8 | chr12:34542219..34546005-chr12:34547286..34550175,4 | K562 | blood: | |
9 | chr1:91851344..91853074-chr12:34372634..34374167,5 | MCF-7 | breast: | |
10 | chr12:34472451..34474607-chr12:34482688..34484610,2 | K562 | blood: | |
11 | chr12:34513093..34516192-chr12:34527570..34530403,3 | K562 | blood: | |
12 | chr12:34277684..34281105-chr12:34367413..34370316,3 | K562 | blood: | |
13 | chr12:34491491..34493706-chr12:34544208..34545803,2 | K562 | blood: | |
14 | chr12:34275660..34276572-chr12:34778082..34778680,2 | MCF-7 | breast: | |
15 | chr12:34497129..34499259-chr12:34508235..34509796,2 | K562 | blood: | |
16 | chr12:34416748..34417268-chr2:133025884..133026405,2 | MCF-7 | breast: | |
17 | chr12:34405769..34407368-chr12:38464924..38466718,2 | K562 | blood: | |
18 | chr12:34500138..34502153-chr12:34504147..34506890,2 | K562 | blood: | |
19 | chr1:91851334..91853102-chr12:34372625..34374158,7 | MCF-7 | breast: | |
20 | chr12:34275803..34276751-chr12:34446099..34446740,3 | K562 | blood: | |
21 | chr12:34372131..34372654-chr9:79186162..79186868,3 | MCF-7 | breast: | |
22 | chr12:34371140..34372648-chr12:127650511..127652141,3 | MCF-7 | breast: | |
23 | chr1:91852330..91853034-chr12:34372628..34373167,11 | MCF-7 | breast: | |
24 | chr12:34544160..34546005-chr12:34547460..34549884,2 | K562 | blood: | |
25 | chr1:91852355..91852916-chr12:34372634..34373168,4 | MCF-7 | breast: | |
26 | chr12:34472451..34474607-chr12:34482688..34484610,2 | K562 | blood: | |
27 | chr12:34372136..34372665-chr12:127650606..127651138,2 | MCF-7 | breast: | |
28 | chr12:34191233..34191868-chr12:34777963..34778741,2 | MCF-7 | breast: | |
29 | chr12:34497610..34503522-chr12:34523490..34528831,5 | K562 | blood: | |
30 | chr12:34487742..34489883-chr12:34492282..34495193,2 | K562 | blood: | |
31 | chr12:34279057..34280887-chr12:34440053..34441876,2 | K562 | blood: | |
32 | chr12:34372145..34372649-chr9:79186173..79186679,2 | MCF-7 | breast: | |
33 | chr12:34497129..34499259-chr12:34508235..34509796,2 | K562 | blood: | |
34 | chr12:34376481..34379453-chr12:34384361..34386376,2 | K562 | blood: | |
35 | chr12:34372126..34372636-chr12:127650618..127651388,2 | MCF-7 | breast: | |
36 | chr12:34501359..34504154-chr12:34510668..34513544,2 | K562 | blood: | |
37 | chr12:34372661..34373161-chrX:108297704..108298236,2 | HCT-116 | colon: | |
38 | chr12:34491491..34493706-chr12:34544208..34545803,2 | K562 | blood: | |
39 | chr12:34371158..34372658-chr9:79185159..79186851,2 | K562 | blood: | |
40 | chr12:34372126..34372647-chr12:127650887..127651388,2 | MCF-7 | breast: | |
41 | chr12:34487742..34489883-chr12:34492282..34495193,2 | K562 | blood: | |
42 | chr12:34501359..34504154-chr12:34510668..34513544,2 | K562 | blood: | |
43 | chr12:34480099..34482680-chr12:34485043..34486658,2 | K562 | blood: | |
44 | chr12:34275679..34276702-chr12:34339057..34340086,5 | MCF-7 | breast: | |
45 | chr12:34543477..34545374-chr12:34550348..34552407,2 | K562 | blood: | |
46 | chr12:34277684..34280343-chr12:34367543..34370316,2 | K562 | blood: | |
47 | chr12:34416477..34418281-chr16:33956682..33958772,3 | MCF-7 | breast: | |
48 | chr1:91852282..91853087-chr12:34372625..34373157,6 | MCF-7 | breast: | |
49 | chr12:34500138..34502153-chr12:34504147..34506890,2 | K562 | blood: | |
50 | chr12:34497467..34501951-chr12:34506676..34509735,4 | K562 | blood: |
(count:5 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ALG10-5 | chr12:34430929-34431017 | NONHSAT027661 |
2 | lnc-ALG10-4 | chr12:34402416-34402893 | NONHSAT140067 |
3 | lnc-ALG10-3 | chr12:34315397-34315903 | NONHSAT027653 |
4 | lnc-ALG10-5 | chr12:34421984-34422141 | NONHSAT027661 |
5 | lnc-ALG10-2 | chr12:34315112-34315173 | ENSG00000255628 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000255652 | TF binding region |
ENSG00000256986 | TF binding region |
ENSG00000272435 | TF binding region |
ENSG00000258794 | TF binding region |
TUBB8P4 | TF binding region |
ENSG00000256614 | TF binding region |
ENSG00000255652 | CpG island |
ENSG00000256986 | CpG island |
ENSG00000272435 | CpG island |
ENSG00000258794 | CpG island |
TUBB8P4 | CpG island |
ENSG00000256614 | CpG island |
ENSG00000239776 | chromatin interactions |
ENSG00000226958 | chromatin interactions |
ENSG00000241781 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs566919097 | chr12:34315001-34315002 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs183718418 | chr12:34315017-34315018 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs556799598 | chr12:34315026-34315027 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs570220016 | chr12:34315027-34315028 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs187272870 | chr12:34315059-34315060 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs558835205 | chr12:34315111-34315112 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs573972584 | chr12:34315134-34315135 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
8 | rs11836207 | chr12:34315177-34315178 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
9 | rs191169230 | chr12:34315184-34315185 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs555032470 | chr12:34315218-34315219 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs117866207 | chr12:34315256-34315257 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs543421210 | chr12:34315335-34315336 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs562826120 | chr12:34315343-34315344 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs531460204 | chr12:34315355-34315356 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs201277147 | chr12:34315359-34315360 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs386762022 | chr12:34315360-34315361 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs370422092 | chr12:34315361-34315362 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs368477214 | chr12:34315362-34315363 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs112169397 | chr12:34315372-34315373 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs199812120 | chr12:34315373-34315374 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs373540812 | chr12:34315381-34315382 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs369431370 | chr12:34315384-34315385 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs112929936 | chr12:34315387-34315388 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs76569488 | chr12:34315392-34315393 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs564729638 | chr12:34315410-34315411 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs117351709 | chr12:34315419-34315420 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs527429748 | chr12:34315422-34315423 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs75601329 | chr12:34315427-34315428 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs141345635 | chr12:34315445-34315446 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs371988421 | chr12:34315470-34315471 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs546015740 | chr12:34315486-34315487 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs116236300 | chr12:34315500-34315501 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs201539487 | chr12:34315503-34315504 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs560583384 | chr12:34315509-34315510 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
35 | rs549606355 | chr12:34315523-34315524 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
36 | rs113920039 | chr12:34315529-34315530 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
37 | rs529708559 | chr12:34315552-34315553 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
38 | rs549479961 | chr12:34315554-34315555 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
39 | rs73096248 | chr12:34315566-34315567 | ZNF genes & repeats | lncRNA | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
40 | rs538920613 | chr12:34315570-34315571 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs182260784 | chr12:34315582-34315583 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs74073506 | chr12:34315584-34315585 | ZNF genes & repeats | lncRNA | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
43 | rs535160807 | chr12:34315585-34315586 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
44 | rs145218184 | chr12:34315606-34315607 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
45 | rs372762057 | chr12:34315644-34315645 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
46 | rs149358286 | chr12:34315725-34315726 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
47 | rs376468185 | chr12:34315734-34315735 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
48 | rs537457302 | chr12:34315781-34315782 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
49 | rs144671229 | chr12:34315785-34315786 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
50 | rs186965802 | chr12:34315786-34315787 | ZNF genes & repeats | lncRNA | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 16751803 | CNVD |
Testicular cancer | 18059402 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Seminomas | 18059402 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Lung cancer | 20668451 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Chronic lymphocytic leukemia | 21670202 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cancer | 20164919 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Breast cancer | 21509527 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cancer | 21129771 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Breast cancer | 17133270 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chordoma | 18071362 | CNVD |
Lung cancer | 18438408 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
small cell lung cancer | 20016488 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Bipolar disorder | 19214233 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:34314000-34320600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
2 | chr12:34319200-34320200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr12:34319800-34320000 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
4 | chr12:34328600-34328800 | ZNF genes & repeats | Primary T killer memory cells from peripheral blood | blood |
5 | chr12:34336800-34345400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
6 | chr12:34338000-34340200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
7 | chr12:34339200-34340000 | Enhancers | Primary B cells from peripheral blood | blood |
8 | chr12:34340000-34341600 | Weak transcription | Primary B cells from peripheral blood | blood |
9 | chr12:34341200-34341600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr12:34341400-34341800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
11 | chr12:34341600-34342200 | Enhancers | Primary B cells from peripheral blood | blood |
12 | chr12:34342200-34342600 | Weak transcription | Primary B cells from peripheral blood | blood |
13 | chr12:34342400-34343000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
14 | chr12:34342400-34343400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
15 | chr12:34342600-34343800 | Enhancers | Primary hematopoietic stem cells | blood |
16 | chr12:34342600-34343800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
17 | chr12:34342600-34344400 | Enhancers | Primary B cells from peripheral blood | blood |
18 | chr12:34343000-34343600 | Enhancers | Primary B cells from cord blood | blood |
19 | chr12:34343400-34343600 | Enhancers | Spleen | Spleen |
20 | chr12:34356800-34359400 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr12:34357000-34358400 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
22 | chr12:34357000-34359200 | Enhancers | Primary B cells from peripheral blood | blood |
23 | chr12:34357200-34357600 | Enhancers | Primary B cells from cord blood | blood |
24 | chr12:34357600-34357800 | Enhancers | Spleen | Spleen |
25 | chr12:34358400-34358600 | Enhancers | Spleen | Spleen |
26 | chr12:34358800-34359000 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
27 | chr12:34360000-34362800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
28 | chr12:34360400-34363600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
29 | chr12:34360800-34363200 | ZNF genes & repeats | Fetal Stomach | stomach |
30 | chr12:34361400-34363600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
31 | chr12:34361400-34364000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
32 | chr12:34361400-34365000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
33 | chr12:34361600-34362400 | ZNF genes & repeats | HepG2 | liver |
34 | chr12:34361600-34362600 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
35 | chr12:34361600-34362600 | ZNF genes & repeats | Gastric | stomach |
36 | chr12:34361600-34362600 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
37 | chr12:34361600-34363800 | ZNF genes & repeats | Pancreas | Pancrea |
38 | chr12:34361800-34362200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
39 | chr12:34361800-34362600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
40 | chr12:34361800-34362600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
41 | chr12:34361800-34362600 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
42 | chr12:34361800-34362600 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
43 | chr12:34361800-34362600 | ZNF genes & repeats | Colonic Mucosa | Colon |
44 | chr12:34361800-34362600 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
45 | chr12:34361800-34362600 | ZNF genes & repeats | Lung | lung |
46 | chr12:34361800-34362600 | ZNF genes & repeats | Spleen | Spleen |
47 | chr12:34361800-34362600 | ZNF genes & repeats | NHEK | skin |
48 | chr12:34362000-34362400 | ZNF genes & repeats | Muscle Satellite Cultured Cells | -- |
49 | chr12:34362000-34362600 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
50 | chr12:34362000-34362600 | ZNF genes & repeats | Skeletal Muscle Male | skeletal muscle |