Variant report

Variant	nsv466333
Chromosome Location	chr9:26728455-26789975
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:26744401-26744755	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:26746655-26746928	HepG2	liver:	n/a	n/a
3	ATF1	chr9:26779126-26779512	K562	blood:	n/a	n/a
4	ATF2	chr9:26746311-26747148	GM12878	blood:	n/a	n/a
5	BACH1	chr9:26746447-26747018	H1-hESC	embryonic stem cell:	n/a	n/a
6	BHLHE40	chr9:26746185-26747145	GM12878	blood:	n/a	n/a
7	BRCA1	chr9:26779130-26779354	Hela-S3	cervix:	n/a	n/a
8	CBX3	chr9:26746522-26747086	HCT-116	colon:	n/a	n/a
9	CBX3	chr9:26746383-26747096	HCT-116	colon:	n/a	n/a
10	CEBPB	chr9:26746742-26746968	MCF-7	breast:	n/a	n/a
11	CEBPB	chr9:26779040-26779491	Hela-S3	cervix:	n/a	chr9:26779217-26779228
12	CEBPB	chr9:26779131-26779393	HepG2	liver:	n/a	chr9:26779217-26779228
13	CEBPB	chr9:26778913-26779621	HCT-116	colon:	n/a	chr9:26779217-26779228
14	CEBPB	chr9:26747699-26748040	ECC-1	luminal epithelium:	n/a	n/a
15	CEBPB	chr9:26779098-26779379	A549	lung:	n/a	chr9:26779217-26779228
16	CEBPB	chr9:26772174-26772358	HepG2	liver:	n/a	chr9:26772321-26772332
17	CEBPB	chr9:26772178-26772489	IMR90	lung:	n/a	chr9:26772321-26772332
18	CEBPB	chr9:26779021-26779569	HCT-116	colon:	n/a	chr9:26779217-26779228
19	CEBPB	chr9:26737005-26737170	A549	lung:	n/a	n/a
20	CHD1	chr9:26746419-26746824	GM12878	blood:	n/a	n/a
21	CHD2	chr9:26746691-26747084	H1-hESC	embryonic stem cell:	n/a	n/a
22	CHD2	chr9:26748166-26748203	HepG2	liver:	n/a	n/a
23	CTCF	chr9:26744420-26744570	RPTEC	kidney:	n/a	chr9:26744559-26744568
24	CTCF	chr9:26744480-26744630	GM12874	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
25	CTCF	chr9:26760777-26761018	H1-hESC	embryonic stem cell:	n/a	n/a
26	CTCF	chr9:26744300-26744450	A549	lung:	n/a	n/a
27	CTCF	chr9:26744492-26744577	Gliobla	brain:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
28	CTCF	chr9:26748630-26748675	GM19238	blood:	n/a	n/a
29	CTCF	chr9:26771374-26771467	GM20000	blood:	n/a	n/a
30	CTCF	chr9:26744416-26744716	A549	lung:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
31	CTCF	chr9:26748620-26748770	GM12878	blood:	n/a	n/a
32	CTCF	chr9:26744450-26744658	GM10248	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
33	CTCF	chr9:26744305-26744961	GM12878	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
34	CTCF	chr9:26744480-26744630	HEK293	kidney:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
35	CTCF	chr9:26744405-26744797	MCF-7	breast:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
36	CTCF	chr9:26744460-26744610	GM12873	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
37	CTCF	chr9:26760820-26760970	GM12871	blood:	n/a	n/a
38	CTCF	chr9:26744500-26744650	HEK293	kidney:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
39	CTCF	chr9:26744560-26744710	K562	blood:	n/a	chr9:26744561-26744571
40	CTCF	chr9:26744540-26744690	HAc	cerebellar:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
41	CTCF	chr9:26744520-26744670	GM12864	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
42	CTCF	chr9:26744432-26744680	GM12878	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
43	CTCF	chr9:26744440-26744590	WERI-Rb-1	eye:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
44	CTCF	chr9:26744840-26744990	SK-N-SH_RA	brain:	n/a	n/a
45	CTCF	chr9:26748600-26748750	HPF	lung:	n/a	n/a
46	CTCF	chr9:26744432-26744724	H1-hESC	embryonic stem cell:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
47	CTCF	chr9:26744440-26744590	GM12801	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
48	CTCF	chr9:26744480-26744630	HepG2	liver:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
49	CTCF	chr9:26744480-26744630	HL-60	blood:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571
50	CTCF	chr9:26744480-26744630	HRPEpiC	eye:	n/a	chr9:26744556-26744574 chr9:26744559-26744568 chr9:26744559-26744572 chr9:26744561-26744571

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:26761746-26761796	K562	blood:	n/a
2	chr9:26761746-26761796	HCF	heart:	n/a
3	chr9:26761746-26761796	AG10803	skin:	n/a
4	chr9:26761746-26761796	PFSK-1	brain:	n/a
5	chr9:26761746-26761796	LNCaP	prostate:	n/a
6	chr9:26761746-26761796	CMK	blood:	n/a
7	chr9:26761746-26761796	NHDF-neo	bronchial:	n/a
8	chr9:26761746-26761796	HMEC	breast:	n/a
9	chr9:26761746-26761796	U87	brain:	n/a
10	chr9:26761746-26761796	GM12892	blood:	n/a
11	chr9:26761746-26761796	HRCEpiC	kidney:	n/a
12	chr9:26761746-26761796	GM06990	blood:	n/a
13	chr9:26761746-26761796	AoSMC	blood vessel:	n/a
14	chr9:26761746-26761796	AG09309	skin:	n/a
15	chr9:26761746-26761796	HAEpiC	amniotic membrane:	n/a
16	chr9:26761746-26761796	H1-hESC	embryonic stem cell:	embryo
17	chr9:26761746-26761796	RPTEC	kidney:	n/a
18	chr9:26761746-26761796	HNPCEpiC	eye:	n/a
19	chr9:26761746-26761796	NB4	blood:	n/a
20	chr9:26761746-26761796	GM19239	blood:	n/a
21	chr9:26761746-26761796	Caco-2	colon:	n/a
22	chr9:26761746-26761796	MCF10A-Er-Src	breast:	n/a
23	chr9:26761746-26761796	AG04449	skin:	fetal
24	chr9:26761746-26761796	HCPEpiC	choroid plexus:	n/a
25	chr9:26761746-26761796	SK-N-SH	brain:	n/a
26	chr9:26761746-26761796	HIPEpiC	eye:	n/a
27	chr9:26761746-26761796	HRPEpiC	eye:	n/a
28	chr9:26761746-26761796	GM12878	blood:	n/a
29	chr9:26761746-26761796	HepG2	liver:	n/a
30	chr9:26761746-26761796	NH-A	brain:	n/a
31	chr9:26761746-26761796	NHBE	bronchial:	n/a
32	chr9:26761746-26761796	PrEC	prostate:	n/a
33	chr9:26761746-26761796	SKMC	muscle:	n/a
34	chr9:26761746-26761796	HL-60	blood:	n/a
35	chr9:26761746-26761796	ECC-1	luminal epithelium:	n/a
36	chr9:26761746-26761796	HCT-116	colon:	n/a
37	chr9:26761746-26761796	HCM	heart:	n/a
38	chr9:26761746-26761796	BE2_C	brain:	n/a
39	chr9:26761746-26761796	SK-N-MC	brain:	n/a
40	chr9:26761746-26761796	AG09319	gingival:	n/a
41	chr9:26761746-26761796	HRE	kidney:	n/a
42	chr9:26761746-26761796	ProgFib	skin:	n/a
43	chr9:26761746-26761796	GM12891	blood:	n/a
44	chr9:26761746-26761796	IMR90	lung:	fetal
45	chr9:26761746-26761796	T-47D	breast:	n/a
46	chr9:26761746-26761796	Hela-S3	cervix:	n/a
47	chr9:26761746-26761796	NT2-D1	testis:	n/a
48	chr9:26761746-26761796	HEK293	kidney:	embryo
49	chr9:26761746-26761796	MCF-7	breast:	n/a
50	chr9:26761746-26761796	ovcar-3	ovarian:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:26758275..26760056-chr9:26761242..26763572,2	K562	blood:
2	chr9:26745009..26745599-chr9:26856133..26856633,2	MCF-7	breast:
3	chr9:26751819..26753348-chr9:26754776..26757194,2	MCF-7	breast:
4	chr9:26744529..26745078-chr9:26976174..26976879,2	K562	blood:
5	chr9:26762229..26764985-chr9:26768189..26769709,2	MCF-7	breast:
6	chr9:26751819..26753348-chr9:26754776..26757194,2	MCF-7	breast:
7	chr9:26744400..26745007-chr9:26975049..26975918,2	MCF-7	breast:
8	chr9:26744169..26744992-chr9:26856156..26857045,4	MCF-7	breast:
9	chr9:26744400..26745094-chr9:26856160..26856966,3	MCF-7	breast:
10	chr9:26758275..26760056-chr9:26761242..26763572,2	K562	blood:
11	chr9:26762229..26764985-chr9:26768189..26769709,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000254261	TF binding region
ENSG00000254261	CpG island
ENSG00000096872	chromatin interactions

Extended variants
information (count: 1719 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:1719 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538496928	chr9:26739201-26739202	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs188341098	chr9:26739204-26739205	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs143438971	chr9:26739206-26739207	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs372503712	chr9:26739213-26739214	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs192875628	chr9:26739260-26739261	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs542696829	chr9:26739266-26739267	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs554609445	chr9:26739284-26739285	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs572924589	chr9:26739288-26739289	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs540576026	chr9:26739331-26739332	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs565450621	chr9:26739339-26739340	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs577459922	chr9:26739370-26739371	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs544529110	chr9:26739401-26739402	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs563053658	chr9:26739403-26739404	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs72717878	chr9:26739439-26739440	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs549119402	chr9:26739477-26739478	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs115144702	chr9:26739478-26739479	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs375402456	chr9:26739480-26739481	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs553794241	chr9:26739509-26739510	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs111508089	chr9:26739539-26739540	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs148067921	chr9:26739554-26739555	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs571497263	chr9:26739568-26739569	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs111610148	chr9:26739574-26739575	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs367624810	chr9:26739584-26739585	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs538902265	chr9:26739585-26739586	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs112062516	chr9:26739590-26739591	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs368031375	chr9:26739605-26739606	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs371838159	chr9:26739608-26739609	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs374324265	chr9:26739609-26739610	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs386414719	chr9:26739610-26739611	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs397738619	chr9:26739622-26739623	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs568727358	chr9:26739654-26739655	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs141772828	chr9:26739655-26739656	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs553797403	chr9:26739689-26739690	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs572963330	chr9:26739702-26739703	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs370306811	chr9:26739776-26739777	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs533982007	chr9:26739834-26739835	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs558910774	chr9:26739849-26739850	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs115680600	chr9:26739884-26739885	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs7035754	chr9:26739914-26739915	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs563144648	chr9:26739943-26739944	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs367653832	chr9:26739959-26739960	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs575087197	chr9:26739979-26739980	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs7035780	chr9:26739981-26739982	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs77310072	chr9:26739991-26739992	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs144794143	chr9:26739994-26739995	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs138639764	chr9:26740008-26740009	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs141741318	chr9:26740009-26740010	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs531978138	chr9:26740010-26740011	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs550485217	chr9:26740033-26740034	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs568766032	chr9:26740038-26740039	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Hodgkin''s lymphoma	18179710	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Acute myeloid leukemia	21251322	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21858162	CNVD
Pancreatic cancer	21811587	CNVD
Barrett''s syndrome	19417022	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
polycythaemia	22829968	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	21525872	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:251 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:26739200-26740400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr9:26739400-26739800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:26739800-26740000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chr9:26740000-26754400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr9:26740400-26742000	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr9:26741600-26742800	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr9:26742000-26744600	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr9:26742200-26742800	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr9:26742200-26743800	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr9:26742200-26744200	Enhancers	H1 Cell Line	embryonic stem cell
11	chr9:26742200-26744400	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr9:26742200-26744600	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr9:26742400-26743800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr9:26742400-26744200	Enhancers	H9 Cell Line	embryonic stem cell
15	chr9:26742600-26743000	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr9:26742600-26743400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr9:26742600-26744600	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr9:26742800-26743000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
19	chr9:26742800-26743200	Enhancers	Small Intestine	intestine
20	chr9:26742800-26743400	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
21	chr9:26742800-26743600	Enhancers	Brain Germinal Matrix	brain
22	chr9:26742800-26743800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr9:26742800-26745000	Enhancers	Duodenum Mucosa	Duodenum
24	chr9:26743000-26743200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
25	chr9:26743000-26744600	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr9:26743200-26744400	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr9:26743400-26746600	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr9:26743400-26748600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr9:26743800-26745000	Weak transcription	Cortex derived primary cultured neurospheres	brain
30	chr9:26743800-26748400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr9:26743800-26748600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr9:26744000-26744400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr9:26744000-26744600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr9:26744200-26748200	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr9:26744200-26754400	Weak transcription	H1 Cell Line	embryonic stem cell
36	chr9:26744400-26744600	Enhancers	Primary hematopoietic stem cells short term culture	blood
37	chr9:26744400-26744600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr9:26744400-26745800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
39	chr9:26744400-26746000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
40	chr9:26744600-26745600	Weak transcription	HUES48 Cell Line	embryonic stem cell
41	chr9:26744600-26745600	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr9:26744600-26745800	Weak transcription	HUES64 Cell Line	embryonic stem cell
43	chr9:26744600-26745800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr9:26745600-26746400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr9:26745600-26747000	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr9:26745600-26749200	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr9:26745800-26747000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr9:26745800-26747200	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chr9:26745800-26748600	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr9:26745800-26749400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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