Variant report

Variant	nsv470286
Chromosome Location	chr12:39651893-39729700
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:39713017-39713303	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:39726981-39727045	K562	blood:	n/a	n/a
3	ARID3A	chr12:39708632-39708643	K562	blood:	n/a	n/a
4	ATF1	chr12:39681654-39681982	K562	blood:	n/a	n/a
5	BACH1	chr12:39713137-39713293	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr12:39671281-39671667	GM12878	blood:	n/a	n/a
7	BATF	chr12:39693284-39693435	GM12878	blood:	n/a	n/a
8	BATF	chr12:39693282-39693429	GM12878	blood:	n/a	n/a
9	BATF	chr12:39671306-39671625	GM12878	blood:	n/a	n/a
10	BHLHE40	chr12:39667041-39667224	GM12878	blood:	n/a	n/a
11	BHLHE40	chr12:39671371-39671521	GM12878	blood:	n/a	n/a
12	BRCA1	chr12:39694055-39694061	GM12878	blood:	n/a	n/a
13	CEBPB	chr12:39671251-39671626	K562	blood:	n/a	chr12:39671434-39671447 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
14	CEBPB	chr12:39681203-39682057	Hela-S3	cervix:	n/a	chr12:39681826-39681837
15	CEBPB	chr12:39708432-39708620	A549	lung:	n/a	chr12:39708518-39708529
16	CEBPB	chr12:39671277-39671610	HepG2	liver:	n/a	chr12:39671434-39671447 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
17	CEBPB	chr12:39671272-39671617	A549	lung:	n/a	chr12:39671434-39671447 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
18	CEBPB	chr12:39712949-39713260	HepG2	liver:	n/a	chr12:39713116-39713127
19	CEBPB	chr12:39681542-39682062	K562	blood:	n/a	chr12:39681826-39681837
20	CEBPB	chr12:39671259-39671594	MCF-7	breast:	n/a	chr12:39671434-39671447 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
21	CEBPB	chr12:39671094-39671647	Hela-S3	cervix:	n/a	chr12:39671434-39671447 chr12:39671239-39671252 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
22	CEBPB	chr12:39709737-39709804	A549	lung:	n/a	n/a
23	CEBPB	chr12:39712964-39713245	MCF-7	breast:	n/a	chr12:39713116-39713127
24	CEBPB	chr12:39681643-39682028	HepG2	liver:	n/a	chr12:39681826-39681837
25	CEBPB	chr12:39681618-39681998	MCF-7	breast:	n/a	chr12:39681826-39681837
26	CEBPB	chr12:39707718-39707730	K562	blood:	n/a	n/a
27	CEBPB	chr12:39681689-39681935	HepG2	liver:	n/a	chr12:39681826-39681837
28	CEBPB	chr12:39681567-39682036	ECC-1	luminal epithelium:	n/a	chr12:39681826-39681837
29	CEBPB	chr12:39724245-39724382	A549	lung:	n/a	chr12:39724314-39724325 chr12:39724316-39724327
30	CEBPB	chr12:39724202-39724401	HepG2	liver:	n/a	chr12:39724314-39724325 chr12:39724316-39724327
31	CEBPB	chr12:39681563-39682066	ECC-1	luminal epithelium:	n/a	chr12:39681826-39681837
32	CEBPB	chr12:39681644-39682034	A549	lung:	n/a	chr12:39681826-39681837
33	CEBPB	chr12:39681602-39681955	A549	lung:	n/a	chr12:39681826-39681837
34	CEBPB	chr12:39681603-39682092	MCF-7	breast:	n/a	chr12:39681826-39681837
35	CEBPB	chr12:39681750-39681908	HepG2	liver:	n/a	chr12:39681826-39681837
36	CEBPB	chr12:39713048-39713212	HepG2	liver:	n/a	chr12:39713116-39713127
37	CEBPB	chr12:39671246-39671623	IMR90	lung:	n/a	chr12:39671434-39671447 chr12:39671434-39671447 chr12:39671434-39671445 chr12:39671436-39671447
38	CEBPB	chr12:39681629-39681971	K562	blood:	n/a	chr12:39681826-39681837
39	CEBPB	chr12:39681650-39682021	IMR90	lung:	n/a	chr12:39681826-39681837
40	CEBPB	chr12:39708398-39708605	HepG2	liver:	n/a	chr12:39708518-39708529
41	CEBPB	chr12:39681517-39682075	A549	lung:	n/a	chr12:39681826-39681837
42	CEBPB	chr12:39681640-39682014	H1-hESC	embryonic stem cell:	n/a	chr12:39681826-39681837
43	CEBPB	chr12:39681660-39682018	K562	blood:	n/a	chr12:39681826-39681837
44	CEBPB	chr12:39667114-39667522	Hela-S3	cervix:	n/a	n/a
45	CTCF	chr12:39712140-39712290	AG04450	lung:	n/a	chr12:39712194-39712215 chr12:39712193-39712209 chr12:39712192-39712210
46	CTCF	chr12:39667080-39667230	NHEK	skin:	n/a	chr12:39667166-39667182 chr12:39667168-39667178 chr12:39667160-39667181 chr12:39667167-39667180 chr12:39667171-39667180 chr12:39667165-39667183
47	CTCF	chr12:39712160-39712310	HFF-Myc	foreskin:	n/a	chr12:39712194-39712215 chr12:39712193-39712209 chr12:39712192-39712210
48	CTCF	chr12:39712160-39712310	HCT-116	colon:	n/a	chr12:39712194-39712215 chr12:39712193-39712209 chr12:39712192-39712210
49	CTCF	chr12:39667060-39667210	GM12866	blood:	n/a	chr12:39667166-39667182 chr12:39667168-39667178 chr12:39667160-39667181 chr12:39667167-39667180 chr12:39667171-39667180 chr12:39667165-39667183
50	CTCF	chr12:39667120-39667270	AG10803	skin:	n/a	chr12:39667166-39667182 chr12:39667168-39667178 chr12:39667160-39667181 chr12:39667167-39667180 chr12:39667171-39667180 chr12:39667165-39667183

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:39727030-39727080	U87	brain:	n/a
2	chr12:39687917-39687967	K562	blood:	n/a
3	chr12:39727030-39727080	U87	brain:	n/a
4	chr12:39687917-39687967	K562	blood:	n/a
5	chr12:39726715-39726765	HIPEpiC	eye:	n/a
6	chr12:39727030-39727080	HepG2	liver:	n/a
7	chr12:39687917-39687967	HRCEpiC	kidney:	n/a
8	chr12:39706834-39706884	BE2_C	brain:	n/a
9	chr12:39706834-39706884	PANC-1	pancreas:	n/a
10	chr12:39727030-39727080	Hela-S3	cervix:	n/a
11	chr12:39687917-39687967	MCF-7	breast:	n/a
12	chr12:39726715-39726765	HMEC	breast:	n/a
13	chr12:39727030-39727080	HNPCEpiC	eye:	n/a
14	chr12:39706834-39706884	HNPCEpiC	eye:	n/a
15	chr12:39726715-39726765	K562	blood:	n/a
16	chr12:39727030-39727080	SKMC	muscle:	n/a
17	chr12:39687917-39687967	LNCaP	prostate:	n/a
18	chr12:39727030-39727080	HL-60	blood:	n/a
19	chr12:39726715-39726765	NHDF-neo	bronchial:	n/a
20	chr12:39687917-39687967	Hepatocyte	liver:	n/a
21	chr12:39687917-39687967	SK-N-MC	brain:	n/a
22	chr12:39726715-39726765	Jurkat	blood:	n/a
23	chr12:39706834-39706884	GM12892	blood:	n/a
24	chr12:39727030-39727080	ovcar-3	ovarian:	n/a
25	chr12:39727030-39727080	GM12891	blood:	n/a
26	chr12:39727030-39727080	AG04449	skin:	fetal
27	chr12:39727030-39727080	H1-hESC	embryonic stem cell:	embryo
28	chr12:39727030-39727080	NHDF-neo	bronchial:	n/a
29	chr12:39726715-39726765	HCM	heart:	n/a
30	chr12:39687917-39687967	SK-N-SH_RA	brain:	n/a
31	chr12:39727030-39727080	HRPEpiC	eye:	n/a
32	chr12:39727030-39727080	RPTEC	kidney:	n/a
33	chr12:39687917-39687967	SAEC	small airway:	n/a
34	chr12:39726715-39726765	H1-hESC	embryonic stem cell:	embryo
35	chr12:39706834-39706884	NH-A	brain:	n/a
36	chr12:39706834-39706884	T-47D	breast:	n/a
37	chr12:39727030-39727080	NB4	blood:	n/a
38	chr12:39687917-39687967	NT2-D1	testis:	n/a
39	chr12:39726715-39726765	SK-N-MC	brain:	n/a
40	chr12:39706834-39706884	HepG2	liver:	n/a
41	chr12:39687917-39687967	BJ	skin:	n/a
42	chr12:39727030-39727080	HCPEpiC	choroid plexus:	n/a
43	chr12:39687917-39687967	MCF10A-Er-Src	breast:	n/a
44	chr12:39706834-39706884	NB4	blood:	n/a
45	chr12:39706834-39706884	HCPEpiC	choroid plexus:	n/a
46	chr12:39726715-39726765	HL-60	blood:	n/a
47	chr12:39727030-39727080	SK-N-SH_RA	brain:	n/a
48	chr12:39706834-39706884	RPTEC	kidney:	n/a
49	chr12:39727030-39727080	HCF	heart:	n/a
50	chr12:39727030-39727080	IMR90	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr12:39727146..39729804-chr12:39835867..39838331,2	K562	blood:
2	chr12:39694207..39696152-chr12:39837237..39840087,2	K562	blood:
3	chr12:39708828..39711217-chr12:39835849..39838225,2	K562	blood:
4	chr12:39300107..39301045-chr12:39666439..39667709,7	MCF-7	breast:
5	chr12:39708405..39711742-chr12:39713944..39715751,3	K562	blood:
6	chr12:39707343..39709850-chr12:39833796..39835957,2	K562	blood:
7	chr12:39706735..39709135-chr12:39713252..39715316,2	K562	blood:
8	chr12:39701621..39703209-chr12:39709361..39712125,2	K562	blood:
9	chr12:39723120..39728244-chr12:39834929..39837982,4	MCF-7	breast:
10	chr12:39685600..39687183-chr12:39700503..39702703,2	K562	blood:
11	chr12:39701709..39705031-chr12:39707216..39710861,3	K562	blood:
12	chr12:39679471..39682455-chr12:39683067..39685661,2	MCF-7	breast:
13	chr12:39725322..39729241-chr12:39730380..39734731,5	K562	blood:
14	chr12:39701435..39705436-chr12:39706649..39711644,6	MCF-7	breast:
15	chr12:39708222..39708926-chr12:39836719..39837524,2	MCF-7	breast:
16	chr12:39690972..39693239-chr12:39694761..39697625,2	MCF-7	breast:
17	chr12:39701709..39705031-chr12:39707216..39710861,3	K562	blood:
18	chr12:38722084..38722866-chr12:39667246..39667987,2	MCF-7	breast:
19	chr12:38532568..38533113-chr12:39666750..39667387,2	K562	blood:
20	chr12:39685600..39687183-chr12:39700503..39702703,2	K562	blood:
21	chr12:39679471..39682455-chr12:39683067..39685661,2	MCF-7	breast:
22	chr12:39701621..39703209-chr12:39709361..39712125,2	K562	blood:
23	chr12:39721304..39723929-chr12:39731222..39733567,2	K562	blood:
24	chr12:39711735..39712649-chr12:40077357..40078312,2	K562	blood:
25	chr12:39709526..39712296-chr12:39716470..39718844,2	MCF-7	breast:
26	chr12:39706735..39709135-chr12:39713252..39715316,2	K562	blood:
27	chr12:39708198..39710149-chr12:39835781..39837977,2	MCF-7	breast:
28	chr12:39698698..39701515-chr12:39705485..39708006,2	K562	blood:
29	chr12:39709526..39712296-chr12:39716470..39718844,2	MCF-7	breast:
30	chr12:39729399..39730971-chr12:39733599..39736235,2	MCF-7	breast:
31	chr12:39701435..39705436-chr12:39706649..39711644,6	MCF-7	breast:
32	chr12:39705679..39708570-chr12:39709976..39712207,2	MCF-7	breast:
33	chr12:39719395..39721529-chr12:39835962..39838768,2	MCF-7	breast:
34	chr12:39713760..39716372-chr12:39835448..39837014,2	MCF-7	breast:
35	chr12:39708256..39710912-chr12:39833762..39835679,2	MCF-7	breast:
36	chr12:39690972..39693239-chr12:39694761..39697625,2	MCF-7	breast:
37	chr12:39716315..39719529-chr12:39835472..39838157,3	K562	blood:
38	chr12:39707021..39709923-chr12:39830984..39833005,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C12orf40-3	chr12:39721472-39721634	NONHSAT027701
2	lnc-C12orf40-3	chr12:39721864-39722713	NONHSAT027701
3	lnc-C12orf40-4	chr12:39667587-39667691	NONHSAT027698
4	lnc-C12orf40-3	chr12:39721452-39721634	NONHSAT027702
5	lnc-C12orf40-4	chr12:39667024-39667150	NONHSAT027698
6	lnc-C12orf40-3	chr12:39721864-39722713	NONHSAT027700
7	lnc-C12orf40-3	chr12:39720338-39720424	NONHSAT027701
8	lnc-C12orf40-3	chr12:39721472-39721634	NONHSAT027700
9	lnc-C12orf40-3	chr12:39721864-39722713	NONHSAT027702
10	lnc-C12orf40-3	chr12:39720075-39720147	NONHSAT027700

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	KIF21A	hsa-miR-186-5p	chr12:39687380-39687401
2	KIF21A	hsa-miR-186-5p	chr12:39688170-39688191

Variant related genes	Relation type
KIF21A	TF binding region
KIF21A	CpG island
ENSG00000252974	chromatin interactions
ENSG00000257718	chromatin interactions
ENSG00000139116	chromatin interactions

Extended variants
information (count: 2188 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:2188 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528917029	chr12:39663478-39663479	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs534779613	chr12:39663491-39663492	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs528614291	chr12:39663493-39663494	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs149324416	chr12:39663505-39663506	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs532917351	chr12:39663535-39663536	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs551168266	chr12:39663549-39663550	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs569789111	chr12:39663580-39663581	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs546798563	chr12:39663596-39663597	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs561813428	chr12:39663604-39663605	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs75947934	chr12:39663606-39663607	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs188160239	chr12:39663637-39663638	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs952226	chr12:39663652-39663653	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs553473502	chr12:39663658-39663659	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs180696838	chr12:39663719-39663720	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs539176693	chr12:39663766-39663767	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs557529900	chr12:39663769-39663770	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs575776580	chr12:39663780-39663781	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs536935957	chr12:39663800-39663801	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs554981716	chr12:39663814-39663815	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs78384552	chr12:39663821-39663822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540630581	chr12:39663823-39663824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs558985838	chr12:39663830-39663831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs185621652	chr12:39663838-39663839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs147423257	chr12:39663872-39663873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs563473913	chr12:39663937-39663938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs190083331	chr12:39663945-39663946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs375988843	chr12:39663957-39663958	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs139701903	chr12:39663970-39663971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs552187582	chr12:39663974-39663975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs561048657	chr12:39663995-39663996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs77865559	chr12:39663996-39663997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs145216926	chr12:39664046-39664047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs11833985	chr12:39664050-39664051	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs376706795	chr12:39664066-39664067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs539115549	chr12:39664079-39664080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs11834011	chr12:39664133-39664134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs182086528	chr12:39664137-39664138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs147601603	chr12:39664172-39664173	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs370635675	chr12:39664187-39664188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs116414191	chr12:39664192-39664193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs140391904	chr12:39664197-39664198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs186682979	chr12:39664212-39664213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs552544328	chr12:39664222-39664223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs191688527	chr12:39664284-39664285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs545070168	chr12:39664299-39664300	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs534164526	chr12:39664312-39664313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs374574246	chr12:39664314-39664315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs142092996	chr12:39664317-39664318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs11171549	chr12:39664326-39664327	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs151144313	chr12:39664360-39664361	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	21509527	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Autism	20858243	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Cancer	20164920	CNVD
Colorectal cancer	16272173	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:594 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:39663400-39663800	Enhancers	Hela-S3	cervix
2	chr12:39663800-39667200	Weak transcription	Hela-S3	cervix
3	chr12:39665800-39666200	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr12:39666600-39667000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr12:39666800-39667400	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr12:39667200-39667600	Enhancers	Hela-S3	cervix
7	chr12:39669400-39670000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr12:39674800-39690200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr12:39681200-39682000	Enhancers	Hela-S3	cervix
10	chr12:39681400-39681600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr12:39681400-39682200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr12:39681600-39687600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr12:39682000-39699200	Weak transcription	Hela-S3	cervix
14	chr12:39682400-39688800	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr12:39683200-39696000	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr12:39683400-39685600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr12:39683400-39686000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr12:39684400-39695400	Weak transcription	A549	lung
19	chr12:39684600-39688000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr12:39684600-39688200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr12:39685200-39697400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr12:39685200-39714400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr12:39685600-39688800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr12:39686000-39688200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr12:39686200-39686600	Enhancers	Brain Germinal Matrix	brain
26	chr12:39686400-39686600	Enhancers	Fetal Brain Male	brain
27	chr12:39686400-39699600	Weak transcription	HMEC	breast
28	chr12:39686600-39686800	Enhancers	Pancreas	Pancrea
29	chr12:39686600-39688000	Weak transcription	Brain Germinal Matrix	brain
30	chr12:39686600-39688400	Weak transcription	Fetal Brain Male	brain
31	chr12:39686600-39722400	Weak transcription	GM12878-XiMat	blood
32	chr12:39686600-39725400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr12:39686800-39729800	Weak transcription	Sigmoid Colon	Sigmoid Colon
34	chr12:39686800-39738800	Weak transcription	Pancreas	Pancrea
35	chr12:39687200-39696800	Weak transcription	Stomach Smooth Muscle	stomach
36	chr12:39687200-39726400	Weak transcription	Fetal Intestine Small	intestine
37	chr12:39687600-39688800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr12:39687600-39723800	Weak transcription	Duodenum Mucosa	Duodenum
39	chr12:39687800-39688200	Enhancers	Brain Anterior Caudate	brain
40	chr12:39688000-39688400	Enhancers	Brain Germinal Matrix	brain
41	chr12:39688000-39688800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr12:39688000-39689600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr12:39688000-39690400	Weak transcription	Liver	Liver
44	chr12:39688200-39688600	Weak transcription	Brain Anterior Caudate	brain
45	chr12:39688200-39689000	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr12:39688200-39689200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr12:39688400-39688600	Enhancers	Fetal Brain Male	brain
48	chr12:39688400-39688800	Enhancers	Brain Inferior Temporal Lobe	brain
49	chr12:39688400-39688800	Enhancers	Brain Substantia Nigra	brain
50	chr12:39688400-39689000	Enhancers	Brain Angular Gyrus	brain

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