Variant report

Variant nsv4928
Chromosome Location chr5:97689980-97734899
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:97690000-97690400 Active TSS NHDF-Ad bronchial
2 chr5:97690400-97690800 Flanking Active TSS NHDF-Ad bronchial
3 chr5:97690400-97691200 Enhancers Dnd41 blood
4 chr5:97690800-97691000 Enhancers NHDF-Ad bronchial
5 chr5:97693400-97693600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:97693600-97696800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:97694000-97696600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:97695800-97696000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:97696000-97696200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:97696000-97696200 ZNF genes & repeats Gastric stomach
11 chr5:97696200-97696600 ZNF genes & repeats Spleen Spleen
12 chr5:97696200-97700800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:97696200-97700800 Weak transcription Gastric stomach
14 chr5:97696600-97697600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:97697600-97702000 Weak transcription Pancreas Pancrea
16 chr5:97697600-97705200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:97700200-97700800 Enhancers Fetal Intestine Large intestine
18 chr5:97700200-97700800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr5:97700200-97701600 Enhancers Brain Germinal Matrix brain
20 chr5:97700400-97700800 Enhancers Fetal Stomach stomach
21 chr5:97700800-97701000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr5:97700800-97701200 Enhancers Fetal Muscle Leg muscle
23 chr5:97702000-97702200 Enhancers Pancreas Pancrea
24 chr5:97703400-97704000 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr5:97703800-97704000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr5:97703800-97704600 Enhancers HUVEC blood vessel
27 chr5:97704000-97704200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:97705000-97705400 Enhancers Stomach Mucosa stomach
29 chr5:97705200-97707200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr5:97707200-97719200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:97709600-97710400 Enhancers Brain Germinal Matrix brain
32 chr5:97709600-97710800 Enhancers HUES48 Cell Line embryonic stem cell
33 chr5:97710000-97710600 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr5:97710000-97711200 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr5:97710400-97710600 Enhancers iPS-20b Cell Line embryonic stem cell
36 chr5:97710600-97712200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr5:97710800-97712400 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr5:97710800-97712400 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr5:97711200-97711600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr5:97711600-97714600 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr5:97712000-97713800 Enhancers ES-WA7 Cell Line embryonic stem cell
42 chr5:97712200-97714200 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr5:97712400-97712800 Enhancers HUES6 Cell Line embryonic stem cell
44 chr5:97712400-97714000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr5:97712400-97714600 Enhancers HUES48 Cell Line embryonic stem cell
46 chr5:97712400-97714600 Enhancers iPS-20b Cell Line embryonic stem cell
47 chr5:97712600-97714200 Enhancers HUES64 Cell Line embryonic stem cell
48 chr5:97712800-97713800 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr5:97713400-97714000 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr5:97713600-97713800 Enhancers H1 Cell Line embryonic stem cell

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