No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs564093427 |
chr19:20150698-20150699 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs188712717 |
chr19:20150705-20150706 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs551393760 |
chr19:20150761-20150762 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs546642045 |
chr19:20150768-20150769 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs560255991 |
chr19:20150792-20150793 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs1121387 |
chr19:20150794-20150795 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
7 |
rs548751738 |
chr19:20150808-20150809 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs568607503 |
chr19:20150811-20150812 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs146268618 |
chr19:20150816-20150817 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs1121388 |
chr19:20150819-20150820 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs545723707 |
chr19:20150839-20150840 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs567268949 |
chr19:20150884-20150885 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs118163672 |
chr19:20150887-20150888 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs539417757 |
chr19:20150895-20150896 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs552963675 |
chr19:20150910-20150911 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs34190760 |
chr19:20150976-20150977 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs572957031 |
chr19:20150985-20150986 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs79101067 |
chr19:20151069-20151070 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs397814432 |
chr19:20151080-20151081 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs555531939 |
chr19:20151092-20151093 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs112355481 |
chr19:20151115-20151116 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs375612161 |
chr19:20151120-20151121 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs112615586 |
chr19:20151129-20151130 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs139215374 |
chr19:20151131-20151132 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs544476551 |
chr19:20151148-20151149 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs564199629 |
chr19:20151226-20151227 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs578012095 |
chr19:20151247-20151248 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs540196883 |
chr19:20151254-20151255 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs560191000 |
chr19:20151256-20151257 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs8104703 |
chr19:20151257-20151258 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs530182294 |
chr19:20151270-20151271 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs544945127 |
chr19:20151280-20151281 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs73924167 |
chr19:20151327-20151328 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs8103855 |
chr19:20151331-20151332 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
35 |
rs531040610 |
chr19:20151376-20151377 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs551175870 |
chr19:20151397-20151398 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs8104933 |
chr19:20151409-20151410 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs144048358 |
chr19:20151515-20151516 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs546586730 |
chr19:20151588-20151589 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs148625724 |
chr19:20151590-20151591 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs535539241 |
chr19:20151596-20151597 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs201646247 |
chr19:20151600-20151601 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs60489329 |
chr19:20151617-20151618 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs376764163 |
chr19:20151618-20151619 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs376305457 |
chr19:20151619-20151620 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs575717674 |
chr19:20151643-20151644 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs537611803 |
chr19:20151708-20151709 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs557942694 |
chr19:20151758-20151759 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs370677815 |
chr19:20151783-20151784 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs71172558 |
chr19:20151795-20151796 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|