Variant report

Variant	nsv517772
Chromosome Location	chr11:17401134-17427862
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1373)
CpG islands
(count:1162)
Chromatin interactive
region (count:59)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1373 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:17410820-17411224	HepG2	liver:	n/a	n/a
2	BACH1	chr11:17411299-17411438	K562	blood:	n/a	n/a
3	BACH1	chr11:17408310-17408505	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr11:17427153-17427597	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr11:17410766-17411304	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr11:17421940-17422180	GM12878	blood:	n/a	n/a
7	BCL3	chr11:17405039-17405432	GM12878	blood:	n/a	n/a
8	BHLHE40	chr11:17425607-17425753	HepG2	liver:	n/a	n/a
9	BHLHE40	chr11:17427215-17427415	K562	blood:	n/a	chr11:17427351-17427367
10	BHLHE40	chr11:17425529-17425838	K562	blood:	n/a	n/a
11	BHLHE40	chr11:17411578-17411679	K562	blood:	n/a	n/a
12	BHLHE40	chr11:17405434-17405719	K562	blood:	n/a	n/a
13	BHLHE40	chr11:17410752-17411308	K562	blood:	n/a	chr11:17410931-17410947
14	BHLHE40	chr11:17410753-17410977	GM12878	blood:	n/a	chr11:17410931-17410947
15	BHLHE40	chr11:17405514-17405774	GM12878	blood:	n/a	n/a
16	BHLHE40	chr11:17408228-17408447	K562	blood:	n/a	n/a
17	BRCA1	chr11:17405488-17405821	Hela-S3	cervix:	n/a	n/a
18	CBX3	chr11:17408259-17408511	K562	blood:	n/a	n/a
19	CBX3	chr11:17408154-17408559	K562	blood:	n/a	n/a
20	CCNT2	chr11:17410457-17411257	K562	blood:	n/a	chr11:17410936-17410945 chr11:17411150-17411159 chr11:17410891-17410900
21	CEBPB	chr11:17425589-17425914	ECC-1	luminal epithelium:	n/a	chr11:17425733-17425744
22	CEBPB	chr11:17411120-17411395	Hela-S3	cervix:	n/a	n/a
23	CEBPB	chr11:17425598-17425895	K562	blood:	n/a	chr11:17425733-17425744
24	CEBPB	chr11:17425560-17425913	Hela-S3	cervix:	n/a	chr11:17425733-17425744
25	CEBPB	chr11:17425527-17425936	ECC-1	luminal epithelium:	n/a	chr11:17425733-17425744
26	CEBPB	chr11:17425609-17425889	A549	lung:	n/a	chr11:17425733-17425744
27	CEBPB	chr11:17405117-17405413	IMR90	lung:	n/a	n/a
28	CEBPB	chr11:17425581-17425896	IMR90	lung:	n/a	chr11:17425733-17425744
29	CEBPB	chr11:17425580-17425875	HepG2	liver:	n/a	chr11:17425733-17425744
30	CEBPD	chr11:17410655-17411204	HepG2	liver:	n/a	n/a
31	CHD2	chr11:17411022-17411306	K562	blood:	n/a	n/a
32	CHD2	chr11:17405489-17405689	GM12878	blood:	n/a	n/a
33	CHD2	chr11:17408404-17408530	K562	blood:	n/a	n/a
34	CHD2	chr11:17405615-17405923	K562	blood:	n/a	n/a
35	CHD2	chr11:17410514-17411507	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr11:17410818-17411371	H1-hESC	embryonic stem cell:	n/a	n/a
37	CHD2	chr11:17408293-17408363	HepG2	liver:	n/a	n/a
38	CHD2	chr11:17410993-17411350	HepG2	liver:	n/a	n/a
39	CHD2	chr11:17404692-17404807	K562	blood:	n/a	n/a
40	CHD2	chr11:17421690-17421783	GM12878	blood:	n/a	n/a
41	CHD2	chr11:17410797-17411243	GM12878	blood:	n/a	n/a
42	CREB1	chr11:17410393-17411313	A549	lung:	n/a	n/a
43	CREB1	chr11:17427225-17427522	A549	lung:	n/a	n/a
44	CTCF	chr11:17410220-17410370	HRE	kidney:	n/a	n/a
45	CTCF	chr11:17411231-17411251	MCF-7	breast:	n/a	n/a
46	CTCF	chr11:17410698-17411028	GM19240	blood:	n/a	chr11:17410902-17410915 chr11:17410902-17410911 chr11:17410899-17410917 chr11:17410900-17410916
47	CTCF	chr11:17408260-17408410	GM12878	blood:	n/a	n/a
48	CTCF	chr11:17410780-17410930	HBMEC	blood vessel:	n/a	chr11:17410902-17410915 chr11:17410902-17410911 chr11:17410899-17410917 chr11:17410900-17410916
49	CTCF	chr11:17427240-17427390	HCT-116	colon:	n/a	n/a
50	CTCF	chr11:17405600-17405750	HCT-116	colon:	n/a	chr11:17405637-17405658 chr11:17405636-17405652 chr11:17405638-17405651 chr11:17405638-17405651 chr11:17405638-17405646 chr11:17405635-17405653

(count:1162 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:17409644-17409694	AG04450	lung:	fetal
2	chr11:17410863-17410913	ovcar-3	ovarian:	n/a
3	chr11:17410863-17410913	K562	blood:	n/a
4	chr11:17409644-17409694	AG04450	lung:	fetal
5	chr11:17410863-17410913	ovcar-3	ovarian:	n/a
6	chr11:17410863-17410913	K562	blood:	n/a
7	chr11:17409188-17409238	GM19239	blood:	n/a
8	chr11:17411270-17411320	GM12891	blood:	n/a
9	chr11:17409188-17409238	HPAEpiC	pulmonary alveolar:	n/a
10	chr11:17402841-17402891	SKMC	muscle:	n/a
11	chr11:17409188-17409238	LNCaP	prostate:	n/a
12	chr11:17402841-17402891	HIPEpiC	eye:	n/a
13	chr11:17410380-17410430	GM06990	blood:	n/a
14	chr11:17409644-17409694	Hela-S3	cervix:	n/a
15	chr11:17411270-17411320	CMK	blood:	n/a
16	chr11:17411071-17411121	IMR90	lung:	fetal
17	chr11:17410554-17410604	GM12891	blood:	n/a
18	chr11:17409509-17409559	SKMC	muscle:	n/a
19	chr11:17409188-17409238	H1-hESC	embryonic stem cell:	embryo
20	chr11:17407432-17407482	SAEC	small airway:	n/a
21	chr11:17410400-17410450	GM06990	blood:	n/a
22	chr11:17411270-17411320	GM12892	blood:	n/a
23	chr11:17407432-17407482	HRCEpiC	kidney:	n/a
24	chr11:17410554-17410604	HRCEpiC	kidney:	n/a
25	chr11:17409602-17409652	HEEpiC	esophagus:	n/a
26	chr11:17407432-17407482	GM12878	blood:	n/a
27	chr11:17410863-17410913	HUVEC	blood vessel:	n/a
28	chr11:17409188-17409238	HEK293	kidney:	embryo
29	chr11:17409644-17409694	RPTEC	kidney:	n/a
30	chr11:17409644-17409694	BJ	skin:	n/a
31	chr11:17411071-17411121	ProgFib	skin:	n/a
32	chr11:17402841-17402891	PANC-1	pancreas:	n/a
33	chr11:17409644-17409694	ProgFib	skin:	n/a
34	chr11:17410863-17410913	A549	lung:	n/a
35	chr11:17409644-17409694	ovcar-3	ovarian:	n/a
36	chr11:17410380-17410430	Hela-S3	cervix:	n/a
37	chr11:17410400-17410450	HEK293	kidney:	embryo
38	chr11:17410182-17410232	CMK	blood:	n/a
39	chr11:17410863-17410913	AG10803	skin:	n/a
40	chr11:17409188-17409238	Hepatocyte	liver:	n/a
41	chr11:17411071-17411121	HCF	heart:	n/a
42	chr11:17415270-17415320	SK-N-SH	brain:	n/a
43	chr11:17411766-17411816	MCF-7	breast:	n/a
44	chr11:17407432-17407482	Hepatocyte	liver:	n/a
45	chr11:17411006-17411056	NHDF-neo	bronchial:	n/a
46	chr11:17409602-17409652	Hela-S3	cervix:	n/a
47	chr11:17415270-17415320	AG09309	skin:	n/a
48	chr11:17409602-17409652	HCF	heart:	n/a
49	chr11:17402841-17402891	HNPCEpiC	eye:	n/a
50	chr11:17410863-17410913	HCPEpiC	choroid plexus:	n/a

(count:59 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:17411217..17412789-chr11:17465893..17468748,2	MCF-7	breast:
2	chr11:17418305..17421610-chr11:17424187..17428054,3	K562	blood:
3	chr11:17405241..17406080-chr11:17492901..17493668,2	MCF-7	breast:
4	chr11:17377121..17379727-chr11:17413012..17415189,2	K562	blood:
5	chr11:17427090..17427897-chr18:46517244..46517764,2	MCF-7	breast:
6	chr11:17407226..17410020-chr11:17412106..17414514,2	K562	blood:
7	chr11:17426978..17427915-chr11:17791365..17792221,7	MCF-7	breast:
8	chr11:17405126..17405972-chr11:17525824..17526796,7	MCF-7	breast:
9	chr11:17413027..17414952-chr11:17415169..17417199,2	MCF-7	breast:
10	chr11:17405209..17406183-chr11:17527113..17528432,4	MCF-7	breast:
11	chr11:17405197..17406140-chr11:17492660..17493631,2	K562	blood:
12	chr11:17427284..17427815-chr11:17946414..17946944,2	MCF-7	breast:
13	chr11:17251318..17252261-chr11:17405052..17406043,5	MCF-7	breast:
14	chr11:17410494..17411550-chr11:17427166..17427685,3	MCF-7	breast:
15	chr11:16977896..16978867-chr11:17426967..17427690,6	MCF-7	breast:
16	chr11:17392236..17395328-chr11:17396635..17401653,4	K562	blood:
17	chr11:17427066..17427830-chr11:17464406..17465035,2	MCF-7	breast:
18	chr11:17407309..17407849-chr11:17525524..17526306,2	MCF-7	breast:
19	chr11:17260522..17261598-chr11:17427013..17427898,6	MCF-7	breast:
20	chr11:17405141..17406113-chr11:17549390..17550226,4	K562	blood:
21	chr11:17399571..17401205-chr11:17403779..17406500,2	K562	blood:
22	chr11:17426991..17427860-chr11:17946039..17946557,2	MCF-7	breast:
23	chr11:17405170..17406511-chr11:17549006..17550272,4	MCF-7	breast:
24	chr11:17413027..17414952-chr11:17415169..17417199,2	MCF-7	breast:
25	chr11:17405649..17406157-chr11:17617828..17618472,2	MCF-7	breast:
26	chr11:17403459..17406167-chr11:17526057..17528257,2	K562	blood:
27	chr11:17375991..17376649-chr11:17405080..17405838,2	MCF-7	breast:
28	chr11:17405620..17406191-chr11:17521835..17522724,2	K562	blood:
29	chr11:17405274..17406188-chr11:17494608..17495575,4	MCF-7	breast:
30	chr11:17416000..17416717-chr11:17494745..17495547,2	MCF-7	breast:
31	chr11:17405017..17406217-chr11:17525833..17526983,7	K562	blood:
32	chr11:17407926..17410738-chr11:17427633..17429679,2	MCF-7	breast:
33	chr11:17409155..17411686-chr11:17415958..17417919,2	MCF-7	breast:
34	chr11:17399571..17401205-chr11:17403779..17406500,2	K562	blood:
35	chr11:16977896..16978786-chr11:17426967..17427655,5	MCF-7	breast:
36	chr11:17411046..17413083-chr11:17494986..17496697,2	K562	blood:
37	chr11:17401527..17405179-chr11:17405771..17408702,5	K562	blood:
38	chr11:17373252..17376530-chr11:17405235..17408726,4	K562	blood:
39	chr11:17425857..17428826-chr11:17463749..17466704,2	K562	blood:
40	chr11:17405389..17406159-chr11:17523565..17524770,3	K562	blood:
41	chr11:17404201..17406453-chr11:17548482..17550709,2	K562	blood:
42	chr11:17407664..17411994-chr11:17495609..17498712,4	MCF-7	breast:
43	chr11:17409155..17411686-chr11:17415958..17417919,2	MCF-7	breast:
44	chr11:17405950..17408117-chr11:17411030..17412540,2	K562	blood:
45	chr11:17405333..17406124-chr11:17519578..17520279,2	MCF-7	breast:
46	chr11:17418305..17421610-chr11:17424187..17428054,3	K562	blood:
47	chr11:17426978..17427915-chr11:17791365..17792205,5	MCF-7	breast:
48	chr11:17405241..17406227-chr11:17551569..17552408,2	MCF-7	breast:
49	chr11:17405241..17405887-chr11:17492811..17493698,3	MCF-7	breast:
50	chr11:17401527..17405179-chr11:17405771..17408702,5	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP1-239B22.1.1-1	chr11:17401302-17401911	NONHSAT018227
2	lnc-RP1-239B22.1.1-1	chr11:17402306-17402906	XLOC_009079
3	lnc-ABCC8-1	chr11:17408130-17408297	NONHSAT018231
4	lnc-RP1-239B22.1.1-1	chr11:17402682-17403209	NONHSAT018227
5	lnc-RP1-239B22.1.1-1	chr11:17402038-17402043	NONHSAT018227
6	lnc-ABCC8-1	chr11:17407610-17407859	NONHSAT018231
7	lnc-RP1-239B22.1.1-1	chr11:17402953-17405078	NONHSAT018230
8	lnc-RP1-239B22.1.1-1	chr11:17403023-17403209	XLOC_009079
9	lnc-RP1-239B22.1.1-1	chr11:17402196-17405078	ENSG00000260196.1

No data

Variant related genes	Relation type
ABCC8	TF binding region
KCNJ11	TF binding region
ENSG00000260196	TF binding region
ABCC8	CpG island
KCNJ11	CpG island
ENSG00000260196	CpG island
ENSG00000187486	chromatin interactions
ENSG00000006611	chromatin interactions
ENSG00000070081	chromatin interactions
ENSG00000011405	chromatin interactions
ENSG00000188211	chromatin interactions
ENSG00000006071	chromatin interactions
ENSG00000260196	chromatin interactions

Extended variants
information (count: 1211 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:1211 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10832783	chr11:17401134-17401135	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs76990966	chr11:17401189-17401190	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs543900609	chr11:17401242-17401243	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs561718683	chr11:17401302-17401303	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
5	rs529265442	chr11:17401303-17401304	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
6	rs547663108	chr11:17401304-17401305	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
7	rs571688135	chr11:17401420-17401421	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
8	rs376228962	chr11:17401439-17401440	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
9	rs183424424	chr11:17401446-17401447	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
10	rs187701434	chr11:17401447-17401448	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
11	rs575650331	chr11:17401449-17401450	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
12	rs570236151	chr11:17401472-17401473	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
13	rs530496265	chr11:17401505-17401506	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
14	rs7110094	chr11:17401519-17401520	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs200013780	chr11:17401522-17401523	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs145466820	chr11:17401530-17401531	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs190597919	chr11:17401583-17401584	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs74736801	chr11:17401599-17401600	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
19	rs372987243	chr11:17401644-17401645	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
20	rs117779089	chr11:17401673-17401674	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
21	rs538932270	chr11:17401726-17401727	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs183519747	chr11:17401758-17401759	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
23	rs564468524	chr11:17401791-17401792	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
24	rs575418012	chr11:17401793-17401794	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
25	rs543477038	chr11:17401954-17401955	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs377409155	chr11:17401960-17401961	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs188517968	chr11:17401985-17401986	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs142375700	chr11:17402006-17402007	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs554844124	chr11:17402037-17402038	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs192718081	chr11:17402135-17402136	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs559332577	chr11:17402136-17402137	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs533414106	chr11:17402177-17402178	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs2355016	chr11:17402178-17402179	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs139293374	chr11:17402204-17402205	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs374968471	chr11:17402206-17402207	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs184881417	chr11:17402209-17402210	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs549074567	chr11:17402223-17402224	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs368238182	chr11:17402232-17402233	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs186957687	chr11:17402233-17402234	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs546577000	chr11:17402242-17402243	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs571223846	chr11:17402247-17402248	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs191377477	chr11:17402249-17402250	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs557237710	chr11:17402305-17402306	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs111587040	chr11:17402329-17402330	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs4757511	chr11:17402336-17402337	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs145883836	chr11:17402384-17402385	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs573757549	chr11:17402396-17402397	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs72865054	chr11:17402417-17402418	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs541132423	chr11:17402460-17402461	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs78646083	chr11:17402466-17402467	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21858162	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Neuroblastoma	21899760	CNVD
Lung adenocarcinoma	17086460	CNVD
Urothelial cell carcinoma	18451213	CNVD
Lung cancer	17086460	CNVD
Uterine serous papillary cancer	19536090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Autism	21865298	CNVD

Chromatin state (count:852 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17382400-17401200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:17394200-17401600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr11:17394200-17401800	Strong transcription	HepG2	liver
4	chr11:17394200-17407600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr11:17394400-17402600	Weak transcription	HUVEC	blood vessel
6	chr11:17394400-17403600	Weak transcription	NHLF	lung
7	chr11:17394400-17405000	Weak transcription	Brain Angular Gyrus	brain
8	chr11:17394400-17410200	Weak transcription	A549	lung
9	chr11:17394600-17401600	Strong transcription	K562	blood
10	chr11:17395000-17401200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr11:17395000-17402600	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr11:17395200-17402400	Weak transcription	NHDF-Ad	bronchial
13	chr11:17395200-17402600	Weak transcription	Osteobl	bone
14	chr11:17395200-17405200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr11:17395200-17405800	Weak transcription	Gastric	stomach
16	chr11:17395200-17410200	Weak transcription	Thymus	Thymus
17	chr11:17395600-17406200	Weak transcription	Pancreas	Pancrea
18	chr11:17395600-17410200	Weak transcription	Rectal Smooth Muscle	rectum
19	chr11:17395600-17410400	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr11:17395800-17403600	Strong transcription	Duodenum Mucosa	Duodenum
21	chr11:17395800-17405200	Weak transcription	Monocytes-CD14+_RO01746	blood
22	chr11:17395800-17405400	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr11:17395800-17405400	Weak transcription	Left Ventricle	heart
24	chr11:17395800-17409200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr11:17396000-17408800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr11:17396400-17402000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
27	chr11:17396600-17404600	Weak transcription	Fetal Muscle Trunk	muscle
28	chr11:17396600-17410200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr11:17397000-17401200	Strong transcription	Brain Anterior Caudate	brain
30	chr11:17397200-17404800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr11:17397200-17407800	Weak transcription	Rectal Mucosa Donor 29	rectum
32	chr11:17397400-17402800	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr11:17398200-17410200	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr11:17398400-17405400	Weak transcription	Stomach Smooth Muscle	stomach
35	chr11:17398800-17410200	Weak transcription	Primary T cells from cord blood	blood
36	chr11:17399000-17401600	ZNF genes & repeats	Dnd41	blood
37	chr11:17399000-17404600	Enhancers	Skeletal Muscle Female	skeletal muscle
38	chr11:17399200-17401200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr11:17399200-17404200	Enhancers	Skeletal Muscle Male	skeletal muscle
40	chr11:17399600-17401200	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr11:17399800-17401600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr11:17400000-17401200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr11:17400000-17401200	Enhancers	Psoas Muscle	Psoas
44	chr11:17400000-17401400	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr11:17400000-17402000	Enhancers	Esophagus	oesophagus
46	chr11:17400200-17401600	Strong transcription	Hela-S3	cervix
47	chr11:17400200-17401600	Strong transcription	HSMM	muscle
48	chr11:17400200-17401800	Strong transcription	Rectal Mucosa Donor 31	rectum
49	chr11:17400400-17402400	Strong transcription	Fetal Intestine Large	intestine
50	chr11:17400600-17401200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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