Variant report

Variant nsv520533
Chromosome Location chr3:142417070-142440299
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:142366000-142435400 Weak transcription Colonic Mucosa Colon
2 chr3:142389800-142442400 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr3:142392800-142418000 Weak transcription HepG2 liver
4 chr3:142392800-142425400 Weak transcription Dnd41 blood
5 chr3:142392800-142433000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:142393000-142426000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr3:142393400-142426200 Weak transcription Primary hematopoietic stem cells blood
8 chr3:142404200-142418000 Weak transcription HMEC breast
9 chr3:142408800-142430400 Weak transcription Liver Liver
10 chr3:142412800-142426600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:142413200-142422600 Weak transcription Duodenum Mucosa Duodenum
12 chr3:142416600-142417800 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr3:142417800-142424200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr3:142422600-142424600 Strong transcription Duodenum Mucosa Duodenum
15 chr3:142424000-142425200 Enhancers Fetal Lung lung
16 chr3:142424200-142424600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:142424200-142427000 Strong transcription Rectal Mucosa Donor 31 rectum
18 chr3:142424600-142430200 Weak transcription Duodenum Mucosa Duodenum
19 chr3:142425200-142425800 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr3:142425200-142426000 Enhancers K562 blood
21 chr3:142425800-142431000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr3:142426200-142435000 Weak transcription Fetal Intestine Large intestine
23 chr3:142426400-142427000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:142426600-142427000 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr3:142427000-142430600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr3:142427000-142430600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr3:142429400-142442400 Weak transcription NH-A brain
28 chr3:142429600-142442200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:142430200-142431600 Strong transcription Duodenum Mucosa Duodenum
30 chr3:142430400-142431000 Strong transcription Liver Liver
31 chr3:142430600-142431800 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr3:142430600-142433200 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr3:142431000-142433400 Weak transcription Liver Liver
34 chr3:142431600-142442400 Weak transcription Duodenum Mucosa Duodenum
35 chr3:142431800-142442600 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr3:142433200-142437200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:142434000-142434200 Enhancers A549 lung
38 chr3:142434200-142442200 Weak transcription A549 lung
39 chr3:142435000-142435400 Enhancers HepG2 liver
40 chr3:142435000-142436400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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