Variant report

Variant nsv521769
Chromosome Location chr1:71578442-71633719
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:71582200-71582600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:71582200-71582600 Enhancers Fetal Brain Male brain
3 chr1:71582200-71583800 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:71582600-71583000 Weak transcription Fetal Brain Male brain
5 chr1:71583000-71583600 Enhancers Fetal Brain Male brain
6 chr1:71583400-71583600 Enhancers HSMMtube muscle
7 chr1:71584200-71584400 Enhancers HSMMtube muscle
8 chr1:71595400-71595800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:71595400-71595800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:71595400-71596800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
11 chr1:71595600-71595800 ZNF genes & repeats Pancreas Pancrea
12 chr1:71599600-71600400 ZNF genes & repeats Liver Liver
13 chr1:71618000-71623800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:71619600-71620600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:71619800-71624400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:71620200-71620400 Enhancers Sigmoid Colon Sigmoid Colon
17 chr1:71620200-71620600 Enhancers Gastric stomach
18 chr1:71620200-71622800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr1:71620400-71621200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:71620600-71620800 ZNF genes & repeats Esophagus oesophagus
21 chr1:71620600-71621000 Weak transcription Gastric stomach
22 chr1:71621000-71621400 Enhancers Gastric stomach
23 chr1:71621200-71621400 Enhancers Lung lung
24 chr1:71621200-71621800 Enhancers Sigmoid Colon Sigmoid Colon
25 chr1:71621200-71623600 Enhancers Fetal Lung lung
26 chr1:71621400-71621800 Enhancers Rectal Mucosa Donor 29 rectum
27 chr1:71621400-71622200 Enhancers Colonic Mucosa Colon
28 chr1:71621400-71623800 Weak transcription Lung lung
29 chr1:71621800-71623600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
30 chr1:71621800-71623800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:71622000-71622800 Enhancers Fetal Intestine Small intestine
32 chr1:71622200-71622800 Weak transcription Colonic Mucosa Colon
33 chr1:71622400-71622800 Enhancers Duodenum Smooth Muscle Duodenum
34 chr1:71622800-71623000 Enhancers Colonic Mucosa Colon
35 chr1:71622800-71623200 Enhancers Fetal Intestine Large intestine
36 chr1:71622800-71623200 Weak transcription Fetal Intestine Small intestine
37 chr1:71622800-71623400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
38 chr1:71623200-71624000 Enhancers Fetal Intestine Small intestine
39 chr1:71623400-71623800 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:71623600-71624200 Enhancers Rectal Mucosa Donor 29 rectum
41 chr1:71623800-71624000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:71623800-71624000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr1:71623800-71624200 Enhancers Lung lung
44 chr1:71623800-71624200 Enhancers Sigmoid Colon Sigmoid Colon
45 chr1:71624000-71624400 Enhancers Rectal Mucosa Donor 31 rectum
46 chr1:71624200-71625200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:71624400-71625000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:71625200-71625400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:71625200-71625400 Enhancers Rectal Mucosa Donor 31 rectum
50 chr1:71625200-71625400 Enhancers Sigmoid Colon Sigmoid Colon

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