Variant report
Variant | nsv524091 |
---|---|
Chromosome Location | chr11:54875038-55522549 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2435)
- CpG islands (count:1835)
- Chromatin interactive region (count:4)
- LncRNA region (count:26)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:54944326-54944655 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr11:55026236-55026614 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr11:54997083-54997606 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr11:54944286-54944657 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr11:54961546-54961918 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr11:55025562-55025910 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr11:55026235-55026613 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr11:54912080-54912450 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr11:55019501-55019863 | K562 | blood: | n/a | n/a |
10 | ATF2 | chr11:55425450-55425874 | GM12878 | blood: | n/a | n/a |
11 | BACH1 | chr11:54997720-54998094 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr11:55023515-55023741 | K562 | blood: | n/a | n/a |
13 | BACH1 | chr11:54965393-54965420 | K562 | blood: | n/a | n/a |
14 | BACH1 | chr11:54931923-54932027 | H1-hESC | embryonic stem cell: | n/a | n/a |
15 | BATF | chr11:55425468-55425815 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr11:54941694-54941923 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr11:55016579-55016914 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr11:55014461-55014721 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr11:55026320-55026550 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr11:54990182-54990428 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr11:54993469-54993708 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr11:55050184-55050482 | GM12878 | blood: | n/a | chr11:55050282-55050292 |
23 | BATF | chr11:55025599-55025897 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr11:54923047-54923213 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr11:55426940-55427106 | GM12878 | blood: | n/a | chr11:55427071-55427081 |
26 | BATF | chr11:55022914-55023156 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr11:54975053-54975273 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr11:55024818-55025202 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr11:55016992-55017300 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:55008045-55008551 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:55425431-55426129 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr11:55050155-55050460 | GM12878 | blood: | n/a | chr11:55050282-55050292 |
33 | BATF | chr11:55015283-55015573 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:55017098-55017251 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:55056701-55057020 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:55000026-55000210 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:55027309-55027604 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr11:55026006-55026557 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:54995652-54995903 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:55027264-55027610 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:54995261-54995543 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:54995653-54995836 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:55000059-55000268 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:54994433-54994731 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:55015341-55015571 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr11:54993502-54993709 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr11:55024927-55025127 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr11:54990163-54990439 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr11:54993493-54993698 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr11:54995255-54995565 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:55066025-55066075 | U87 | brain: | n/a |
2 | chr11:55044220-55044270 | HRPEpiC | eye: | n/a |
3 | chr11:55321480-55321530 | GM12892 | blood: | n/a |
4 | chr11:55109885-55109935 | RPTEC | kidney: | n/a |
5 | chr11:55028287-55028337 | NT2-D1 | testis: | n/a |
6 | chr11:55066025-55066075 | U87 | brain: | n/a |
7 | chr11:55044220-55044270 | HRPEpiC | eye: | n/a |
8 | chr11:55321480-55321530 | GM12892 | blood: | n/a |
9 | chr11:55109885-55109935 | RPTEC | kidney: | n/a |
10 | chr11:55028287-55028337 | NT2-D1 | testis: | n/a |
11 | chr11:55338135-55338185 | HEK293 | kidney: | embryo |
12 | chr11:55135337-55135387 | ProgFib | skin: | n/a |
13 | chr11:55135331-55135381 | H1-hESC | embryonic stem cell: | embryo |
14 | chr11:55111658-55111708 | HCF | heart: | n/a |
15 | chr11:55044220-55044270 | HAEpiC | amniotic membrane: | n/a |
16 | chr11:55135222-55135272 | LNCaP | prostate: | n/a |
17 | chr11:55135656-55135706 | HL-60 | blood: | n/a |
18 | chr11:55111658-55111708 | HL-60 | blood: | n/a |
19 | chr11:55227646-55227696 | RPTEC | kidney: | n/a |
20 | chr11:55418816-55418866 | SAEC | small airway: | n/a |
21 | chr11:55135337-55135387 | HCM | heart: | n/a |
22 | chr11:55339961-55340011 | SK-N-SH | brain: | n/a |
23 | chr11:55135046-55135096 | SK-N-MC | brain: | n/a |
24 | chr11:55339961-55340011 | AoSMC | blood vessel: | n/a |
25 | chr11:55431152-55431202 | SAEC | small airway: | n/a |
26 | chr11:55321480-55321530 | AG09309 | skin: | n/a |
27 | chr11:55431584-55431634 | HPAEpiC | pulmonary alveolar: | n/a |
28 | chr11:55044082-55044132 | HepG2 | liver: | n/a |
29 | chr11:55431584-55431634 | PANC-1 | pancreas: | n/a |
30 | chr11:55028287-55028337 | AG09319 | gingival: | n/a |
31 | chr11:55135331-55135381 | ovcar-3 | ovarian: | n/a |
32 | chr11:55044220-55044270 | IMR90 | lung: | fetal |
33 | chr11:55322753-55322803 | BE2_C | brain: | n/a |
34 | chr11:55431152-55431202 | Caco-2 | colon: | n/a |
35 | chr11:55110562-55110612 | SK-N-MC | brain: | n/a |
36 | chr11:55044082-55044132 | GM06990 | blood: | n/a |
37 | chr11:55110233-55110283 | BJ | skin: | n/a |
38 | chr11:55029786-55029836 | K562 | blood: | n/a |
39 | chr11:55066025-55066075 | HMEC | breast: | n/a |
40 | chr11:55338135-55338185 | ECC-1 | luminal epithelium: | n/a |
41 | chr11:55433005-55433055 | AG04450 | lung: | fetal |
42 | chr11:55135331-55135381 | HUVEC | blood vessel: | n/a |
43 | chr11:55110233-55110283 | HAEpiC | amniotic membrane: | n/a |
44 | chr11:55028287-55028337 | HCM | heart: | n/a |
45 | chr11:55029786-55029836 | IMR90 | lung: | fetal |
46 | chr11:55044145-55044195 | K562 | blood: | n/a |
47 | chr11:55134268-55134318 | T-47D | breast: | n/a |
48 | chr11:55044220-55044270 | T-47D | breast: | n/a |
49 | chr11:55227646-55227696 | SK-N-MC | brain: | n/a |
50 | chr11:55321480-55321530 | MCF-7 | breast: | n/a |
(count:4 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:55087931..55090092-chr11:55095019..55097450,2 | K562 | blood: | |
2 | chr11:55087931..55090092-chr11:55095019..55097450,2 | K562 | blood: | |
3 | chr11:55491735..55492235-chr19:6736783..6737284,2 | NB4 | blood: | |
4 | chr1:121484468..121485418-chr11:54954643..54955164,2 | MCF-7 | breast: |
(count:26 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-OR4C11-3 | chr11:55065334-55065439 | NONHSAT021357 |
2 | lnc-OR4C11-4 | chr11:55052405-55052415 | NONHSAT021356 |
3 | lnc-OR4C11-3 | chr11:55062198-55062220 | NONHSAT021357 |
4 | lnc-OR4C11-3 | chr11:55061179-55061232 | NR_038174 |
5 | lnc-OR4C11-1 | chr11:55453377-55453636 | ENSG00000254804 |
6 | lnc-OR4C11-3 | chr11:55065335-55065708 | NR_038174 |
7 | lnc-OR4C11-4 | chr11:55052134-55052227 | NONHSAT021356 |
8 | lnc-OR4C11-2 | chr11:55069766-55070437 | NONHSAT021358 |
9 | lnc-OR4C11-3 | chr11:55061180-55061232 | NONHSAT021357 |
10 | lnc-OR4C11-4 | chr11:55052131-55052225 | NONHSAT021353 |
11 | lnc-OR4C11-4 | chr11:55050561-55050681 | NONHSAT021353 |
12 | lnc-OR4C11-4 | chr11:55052545-55052560 | NONHSAT021356 |
13 | lnc-OR4C11-4 | chr11:55047367-55047617 | NONHSAT021353 |
14 | lnc-OR4C11-2 | chr11:55071537-55071634 | NONHSAT021358 |
15 | lnc-OR4C11-3 | chr11:55062708-55063166 | NONHSAT021357 |
16 | lnc-TRIM48-2 | chr11:55049978-55050453 | NONHSAT021355 |
17 | lnc-OR4C11-1 | chr11:55451617-55451701 | ENSG00000254804 |
18 | lnc-OR4A16-3 | chr11:55034884-55035112 | NONHSAT021352 |
19 | lnc-OR4C11-3 | chr11:55064955-55065048 | NONHSAT021357 |
20 | lnc-OR4C11-4 | chr11:55046923-55047254 | NONHSAT021353 |
21 | lnc-OR4C11-3 | chr11:55064955-55065051 | NR_038174 |
22 | lnc-TRIM48-1 | chr11:55047425-55047765 | NONHSAT021354 |
23 | lnc-OR4C11-4 | chr11:55052911-55052999 | NONHSAT021356 |
24 | lnc-OR4C11-2 | chr11:55072505-55072536 | NONHSAT021358 |
25 | lnc-OR4C11-3 | chr11:55062198-55062220 | NR_038174 |
26 | lnc-OR4C11-3 | chr11:55062708-55063166 | NR_038174 |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR4A11P | TF binding region |
OR4S2 | TF binding region |
OR4A13P | TF binding region |
OR4A9P | TF binding region |
ENSG00000254696 | TF binding region |
OR4A21P | TF binding region |
OR4P4 | TF binding region |
OR4A50P | TF binding region |
OR4A14P | TF binding region |
OR5D17P | TF binding region |
OR4C1P | TF binding region |
ENSG00000255543 | TF binding region |
TRIM51HP | TF binding region |
ENSG00000254828 | TF binding region |
OR4A10P | TF binding region |
OR4A17P | TF binding region |
OR4A16 | TF binding region |
ENSG00000255283 | TF binding region |
OR4C6 | TF binding region |
ENSG00000254804 | TF binding region |
OR4C11 | TF binding region |
OR4X7P | TF binding region |
ENSG00000255493 | TF binding region |
OR5D2P | TF binding region |
OR4C16 | TF binding region |
TRIM48 | TF binding region |
OR4C15 | TF binding region |
OR4A12P | TF binding region |
OR4A15 | TF binding region |
OR4C14P | TF binding region |
OR4V1P | TF binding region |
ENSG00000255110 | TF binding region |
OR4P1P | TF binding region |
OR5D3P | TF binding region |
OR4A11P | CpG island |
OR4S2 | CpG island |
OR4A13P | CpG island |
OR4A9P | CpG island |
ENSG00000254696 | CpG island |
OR4A21P | CpG island |
OR4P4 | CpG island |
OR4A50P | CpG island |
OR4A14P | CpG island |
OR5D17P | CpG island |
OR4C1P | CpG island |
ENSG00000255543 | CpG island |
TRIM51HP | CpG island |
ENSG00000254828 | CpG island |
OR4A10P | CpG island |
OR4A17P | CpG island |
OR4A16 | CpG island |
ENSG00000255283 | CpG island |
OR4C6 | CpG island |
ENSG00000254804 | CpG island |
OR4C11 | CpG island |
OR4X7P | CpG island |
ENSG00000255493 | CpG island |
OR5D2P | CpG island |
OR4C16 | CpG island |
TRIM48 | CpG island |
OR4C15 | CpG island |
OR4A12P | CpG island |
OR4A15 | CpG island |
OR4C14P | CpG island |
OR4V1P | CpG island |
ENSG00000255110 | CpG island |
OR4P1P | CpG island |
OR5D3P | CpG island |
ENSG00000125734 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs10792252 | chr11:54875038-54875039 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
2 | rs544681733 | chr11:54875042-54875043 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs184627036 | chr11:54875043-54875044 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs187359503 | chr11:54875045-54875046 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs147295293 | chr11:54875096-54875097 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs372467285 | chr11:54875130-54875131 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs560576040 | chr11:54875138-54875139 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs552895684 | chr11:54875152-54875153 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs78301030 | chr11:54875167-54875168 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs533506357 | chr11:54875190-54875191 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs542943976 | chr11:54875191-54875192 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs561118935 | chr11:54875196-54875197 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs140950413 | chr11:54875203-54875204 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs188548115 | chr11:54875204-54875205 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs181246361 | chr11:54875206-54875207 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs568865521 | chr11:54875212-54875213 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs531982632 | chr11:54875235-54875236 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs376517600 | chr11:54875236-54875237 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs551071550 | chr11:54875243-54875244 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs61898138 | chr11:54875244-54875245 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
21 | rs555642776 | chr11:54875256-54875257 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs144924718 | chr11:54875268-54875269 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs112140464 | chr11:54875332-54875333 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs61898139 | chr11:54875333-54875334 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs556442846 | chr11:54875348-54875349 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs578026987 | chr11:54875360-54875361 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs149023195 | chr11:54875372-54875373 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs553859281 | chr11:54875379-54875380 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs572427577 | chr11:54875382-54875383 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs371069547 | chr11:54875389-54875390 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs186481887 | chr11:54875390-54875391 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs80085243 | chr11:54875411-54875412 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs1608397 | chr11:54875419-54875420 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
34 | rs577281609 | chr11:54875420-54875421 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs546179703 | chr11:54875424-54875425 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs556339757 | chr11:54875425-54875426 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs543609700 | chr11:54875426-54875427 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs565506743 | chr11:54875433-54875434 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs142071319 | chr11:54875470-54875471 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs56276138 | chr11:54875498-54875499 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs189449199 | chr11:54875500-54875501 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs576519740 | chr11:54875507-54875508 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs527291768 | chr11:54875510-54875511 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs181036292 | chr11:54875511-54875512 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs61898140 | chr11:54875529-54875530 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
46 | rs140279105 | chr11:54875544-54875545 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs186099450 | chr11:54875550-54875551 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs78329305 | chr11:54875556-54875557 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs145374954 | chr11:54875562-54875563 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs138020220 | chr11:54875563-54875564 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Lung cancer | 18438408 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21990379 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 17142309 | CNVD |
Cancer | 20164919 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Breast cancer | 21364760 | CNVD |
Alcoholism | 21790672 | CNVD |
Schizophrenia | 20967226 | CNVD |
Schizophrenia | 23813976 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Breast cancer | 20369283 | CNVD |
Bipolar disorder | 19214233 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Obesity | 21131291 | CNVD |
Melanoma | 20877625 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:54873000-54876000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
2 | chr11:54875000-54875200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
3 | chr11:54875400-54875800 | ZNF genes & repeats | Adipose Nuclei | Adipose |
4 | chr11:54875800-54879400 | Weak transcription | Adipose Nuclei | Adipose |
5 | chr11:54879400-54883200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
6 | chr11:54881400-54884400 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
7 | chr11:54881600-54885400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
8 | chr11:54882800-54884400 | ZNF genes & repeats | Liver | Liver |
9 | chr11:54888000-54888600 | ZNF genes & repeats | Liver | Liver |
10 | chr11:54889200-54890400 | Weak transcription | Stomach Mucosa | stomach |
11 | chr11:54890400-54891000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
12 | chr11:54890400-54891000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
13 | chr11:54890600-54890800 | Flanking Bivalent TSS/Enh | iPS DF 6.9 Cell Line | embryonic stem cell |
14 | chr11:54890600-54890800 | ZNF genes & repeats | Primary T helper naive cells from peripheral blood | blood |
15 | chr11:54890600-54890800 | Bivalent/Poised TSS | Primary T killer naive cells fromperipheralblood | blood |
16 | chr11:54890600-54890800 | Active TSS | Ovary | ovary |
17 | chr11:54890600-54891000 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
18 | chr11:54890600-54891000 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
19 | chr11:54890600-54891000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
20 | chr11:54890600-54891000 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
21 | chr11:54890600-54891000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
22 | chr11:54890600-54891000 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
23 | chr11:54890600-54891000 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
24 | chr11:54890600-54891000 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
25 | chr11:54890600-54891000 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
26 | chr11:54890600-54891000 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
27 | chr11:54890600-54891000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
28 | chr11:54890600-54891000 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
29 | chr11:54890600-54891000 | ZNF genes & repeats | Primary neutrophils fromperipheralblood | blood |
30 | chr11:54890600-54891000 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
31 | chr11:54890600-54891000 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
32 | chr11:54890600-54891000 | Flanking Bivalent TSS/Enh | Primary T helper memory cells from peripheral blood 2 | blood |
33 | chr11:54890600-54891000 | Flanking Bivalent TSS/Enh | Primary T helper naive cells fromperipheralblood | blood |
34 | chr11:54890600-54891000 | ZNF genes & repeats | Primary T helper memory cells from peripheral blood 1 | blood |
35 | chr11:54890600-54891000 | ZNF genes & repeats | Primary T helper cells PMA-I stimulated | -- |
36 | chr11:54890600-54891000 | Flanking Bivalent TSS/Enh | Primary T helper 17 cells PMA-I stimulated | -- |
37 | chr11:54890600-54891000 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
38 | chr11:54890600-54891000 | ZNF genes & repeats | Primary T regulatory cells fromperipheralblood | blood |
39 | chr11:54890600-54891000 | Flanking Bivalent TSS/Enh | Primary T cells effector/memory enriched fromperipheralblood | blood |
40 | chr11:54890600-54891000 | ZNF genes & repeats | Primary Natural Killer cells fromperipheralblood | blood |
41 | chr11:54890600-54891000 | Flanking Bivalent TSS/Enh | Primary T killer memory cells from peripheral blood | blood |
42 | chr11:54890600-54891000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
43 | chr11:54890600-54891000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
44 | chr11:54890600-54891000 | ZNF genes & repeats | Muscle Satellite Cultured Cells | -- |
45 | chr11:54890600-54891000 | Active TSS | Aorta | Aorta |
46 | chr11:54890600-54891000 | ZNF genes & repeats | Liver | Liver |
47 | chr11:54890600-54891000 | ZNF genes & repeats | Brain Angular Gyrus | brain |
48 | chr11:54890600-54891000 | ZNF genes & repeats | Brain Anterior Caudate | brain |
49 | chr11:54890600-54891000 | ZNF genes & repeats | Brain Cingulate Gyrus | brain |
50 | chr11:54890600-54891000 | ZNF genes & repeats | Brain Hippocampus Middle | brain |