Variant report

Variant nsv524461
Chromosome Location chr1:225304331-225347689
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225275600-225312600 Weak transcription Ovary ovary
2 chr1:225298000-225311800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:225299800-225314200 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr1:225300400-225311800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:225301800-225355800 Weak transcription Pancreas Pancrea
6 chr1:225303000-225304800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:225307200-225307400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:225307200-225308400 Enhancers HUES48 Cell Line embryonic stem cell
9 chr1:225307200-225308600 Enhancers HUES64 Cell Line embryonic stem cell
10 chr1:225308600-225310200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr1:225309800-225313000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:225310400-225315400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:225311600-225312800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:225311600-225315400 Weak transcription Fetal Intestine Large intestine
15 chr1:225311800-225312200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:225311800-225313200 ZNF genes & repeats Primary hematopoietic stem cells blood
17 chr1:225311800-225313600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr1:225311800-225314000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:225312000-225312600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:225312000-225313200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
21 chr1:225312000-225313600 ZNF genes & repeats Liver Liver
22 chr1:225312200-225312400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:225312400-225313000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:225312600-225313200 ZNF genes & repeats Ovary ovary
25 chr1:225312800-225313200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:225313000-225314400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:225313200-225315400 Weak transcription Primary hematopoietic stem cells blood
28 chr1:225313200-225315800 Weak transcription Ovary ovary
29 chr1:225322000-225356000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:225323400-225326200 Weak transcription Ovary ovary
31 chr1:225324000-225325600 Weak transcription Fetal Intestine Small intestine
32 chr1:225325400-225326000 Weak transcription Gastric stomach
33 chr1:225325400-225326200 Enhancers Fetal Muscle Leg muscle
34 chr1:225325600-225326400 Enhancers Fetal Muscle Trunk muscle
35 chr1:225325600-225326600 Strong transcription Fetal Intestine Small intestine
36 chr1:225326000-225326400 ZNF genes & repeats Gastric stomach
37 chr1:225326200-225326400 ZNF genes & repeats Ovary ovary
38 chr1:225326400-225327400 Weak transcription Gastric stomach
39 chr1:225326400-225355800 Weak transcription Ovary ovary
40 chr1:225326600-225336200 Weak transcription Fetal Intestine Small intestine
41 chr1:225327400-225327600 Enhancers Gastric stomach
42 chr1:225330800-225331000 Enhancers Pancreatic Islets Pancreatic Islet
43 chr1:225331000-225339200 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:225332600-225332800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
45 chr1:225332800-225356000 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:225333800-225334200 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr1:225334000-225334600 Enhancers HUES48 Cell Line embryonic stem cell
48 chr1:225334000-225334600 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr1:225334000-225334600 Enhancers Fetal Muscle Leg muscle
50 chr1:225334200-225334600 Enhancers H1 Cell Line embryonic stem cell

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