Variant report

Variant	nsv527326
Chromosome Location	chr8:10199548-10320019
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1288)
CpG islands
(count:2138)
Chromatin interactive
region (count:38)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1288 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:10213870-10213887	K562	blood:	n/a	n/a
2	ARID3A	chr8:10318722-10318795	K562	blood:	n/a	n/a
3	ARID3A	chr8:10302131-10302441	K562	blood:	n/a	n/a
4	ARID3A	chr8:10254636-10254879	HepG2	liver:	n/a	n/a
5	ATF2	chr8:10282612-10283138	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr8:10268444-10268969	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr8:10200808-10201262	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr8:10275357-10275714	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr8:10200699-10201282	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF3	chr8:10224559-10224759	K562	blood:	n/a	n/a
11	BACH1	chr8:10276673-10277091	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr8:10200941-10201208	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr8:10207989-10208526	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr8:10302241-10302446	K562	blood:	n/a	n/a
15	BACH1	chr8:10282676-10283036	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr8:10268651-10268866	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr8:10226756-10226913	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr8:10275307-10276030	H1-hESC	embryonic stem cell:	n/a	n/a
19	BATF	chr8:10234430-10234642	GM12878	blood:	n/a	chr8:10234538-10234549
20	BHLHE40	chr8:10302225-10302331	K562	blood:	n/a	n/a
21	BHLHE40	chr8:10282699-10283004	GM12878	blood:	n/a	n/a
22	BHLHE40	chr8:10220844-10221036	K562	blood:	n/a	chr8:10220977-10220998 chr8:10220983-10220992 chr8:10220983-10220992
23	BHLHE40	chr8:10275298-10275573	K562	blood:	n/a	n/a
24	BHLHE40	chr8:10275324-10275524	HepG2	liver:	n/a	n/a
25	BRCA1	chr8:10275385-10275455	HepG2	liver:	n/a	n/a
26	BRCA1	chr8:10282666-10283014	H1-hESC	embryonic stem cell:	n/a	n/a
27	BRCA1	chr8:10222650-10223028	H1-hESC	embryonic stem cell:	n/a	n/a
28	CBX3	chr8:10220606-10221247	HCT-116	colon:	n/a	n/a
29	CBX3	chr8:10275279-10275543	K562	blood:	n/a	n/a
30	CCNT2	chr8:10282666-10283107	K562	blood:	n/a	n/a
31	CEBPB	chr8:10252938-10253304	IMR90	lung:	n/a	n/a
32	CEBPB	chr8:10310668-10310999	HepG2	liver:	n/a	n/a
33	CEBPB	chr8:10259940-10260083	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr8:10254573-10254808	HepG2	liver:	n/a	n/a
35	CEBPB	chr8:10249675-10249890	HepG2	liver:	n/a	chr8:10249794-10249805
36	CEBPB	chr8:10249620-10249982	IMR90	lung:	n/a	chr8:10249794-10249805
37	CEBPB	chr8:10200808-10201202	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr8:10249763-10249853	Hela-S3	cervix:	n/a	chr8:10249794-10249805
39	CEBPB	chr8:10248126-10248250	HepG2	liver:	n/a	chr8:10248204-10248221
40	CEBPB	chr8:10286712-10286743	HepG2	liver:	n/a	chr8:10286717-10286728
41	CEBPB	chr8:10261640-10261652	HepG2	liver:	n/a	n/a
42	CEBPB	chr8:10310657-10310992	IMR90	lung:	n/a	n/a
43	CEBPB	chr8:10211908-10212096	HepG2	liver:	n/a	chr8:10211961-10211974 chr8:10211962-10211973 chr8:10211961-10211972
44	CEBPB	chr8:10310687-10310906	K562	blood:	n/a	n/a
45	CEBPB	chr8:10211894-10212082	IMR90	lung:	n/a	chr8:10211961-10211974 chr8:10211962-10211973 chr8:10211961-10211972
46	CEBPB	chr8:10285722-10286019	IMR90	lung:	n/a	n/a
47	CEBPB	chr8:10310563-10310956	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPD	chr8:10224548-10224858	K562	blood:	n/a	n/a
49	CEBPD	chr8:10224568-10224933	K562	blood:	n/a	n/a
50	CHD1	chr8:10275384-10275697	H1-hESC	embryonic stem cell:	n/a	n/a

(count:2138 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:10273666-10273716	AG04450	lung:	fetal
2	chr8:10259065-10259115	K562	blood:	n/a
3	chr8:10283795-10283845	NHDF-neo	bronchial:	n/a
4	chr8:10273666-10273716	AG04450	lung:	fetal
5	chr8:10259065-10259115	K562	blood:	n/a
6	chr8:10283795-10283845	NHDF-neo	bronchial:	n/a
7	chr8:10262628-10262678	SK-N-SH	brain:	n/a
8	chr8:10262020-10262070	PFSK-1	brain:	n/a
9	chr8:10210282-10210332	HEEpiC	esophagus:	n/a
10	chr8:10207852-10207902	NH-A	brain:	n/a
11	chr8:10200813-10200863	BE2_C	brain:	n/a
12	chr8:10283275-10283325	PFSK-1	brain:	n/a
13	chr8:10282549-10282599	HL-60	blood:	n/a
14	chr8:10283275-10283325	HCF	heart:	n/a
15	chr8:10273726-10273776	HEK293	kidney:	embryo
16	chr8:10283275-10283325	SK-N-MC	brain:	n/a
17	chr8:10282607-10282657	Caco-2	colon:	n/a
18	chr8:10207915-10207965	NHBE	bronchial:	n/a
19	chr8:10282809-10282859	CMK	blood:	n/a
20	chr8:10236882-10236932	NB4	blood:	n/a
21	chr8:10283275-10283325	HIPEpiC	eye:	n/a
22	chr8:10207852-10207902	PFSK-1	brain:	n/a
23	chr8:10262221-10262271	K562	blood:	n/a
24	chr8:10222777-10222827	HEK293	kidney:	embryo
25	chr8:10210282-10210332	BJ	skin:	n/a
26	chr8:10273726-10273776	GM12892	blood:	n/a
27	chr8:10261972-10262022	MCF10A-Er-Src	breast:	n/a
28	chr8:10275927-10275977	HPAEpiC	pulmonary alveolar:	n/a
29	chr8:10273691-10273741	GM12891	blood:	n/a
30	chr8:10253076-10253126	Hela-S3	cervix:	n/a
31	chr8:10208156-10208206	H1-hESC	embryonic stem cell:	embryo
32	chr8:10222777-10222827	NB4	blood:	n/a
33	chr8:10283152-10283202	SK-N-MC	brain:	n/a
34	chr8:10210267-10210317	HEK293	kidney:	embryo
35	chr8:10273890-10273940	AG10803	skin:	n/a
36	chr8:10253076-10253126	HAEpiC	amniotic membrane:	n/a
37	chr8:10261972-10262022	PrEC	prostate:	n/a
38	chr8:10273666-10273716	HNPCEpiC	eye:	n/a
39	chr8:10261641-10261691	SK-N-MC	brain:	n/a
40	chr8:10210267-10210317	Caco-2	colon:	n/a
41	chr8:10286243-10286293	HEEpiC	esophagus:	n/a
42	chr8:10273666-10273716	HRE	kidney:	n/a
43	chr8:10273666-10273716	GM06990	blood:	n/a
44	chr8:10261972-10262022	HCT-116	colon:	n/a
45	chr8:10262020-10262070	NHDF-neo	bronchial:	n/a
46	chr8:10273890-10273940	AG04450	lung:	fetal
47	chr8:10207892-10207942	GM12878	blood:	n/a
48	chr8:10210282-10210332	ProgFib	skin:	n/a
49	chr8:10283275-10283325	HUVEC	blood vessel:	n/a
50	chr8:10262628-10262678	HL-60	blood:	n/a

(count:38 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:10306242..10308473-chr8:10310068..10312588,2	K562	blood:
2	chr8:10240370..10243141-chr8:10246115..10249322,3	K562	blood:
3	chr8:10215726..10218091-chr8:10220767..10222352,2	K562	blood:
4	chr8:10277398..10280414-chr8:10281254..10284079,3	K562	blood:
5	chr8:10200552..10204035-chr8:10205072..10206852,3	K562	blood:
6	chr8:10210498..10212696-chr8:10213697..10216016,2	K562	blood:
7	chr8:10300339..10303104-chr8:10303257..10306151,2	K562	blood:
8	chr8:10275131..10275838-chr8:10399365..10400272,2	MCF-7	breast:
9	chr8:10274936..10276062-chr8:10331610..10332507,4	MCF-7	breast:
10	chr8:9898874..9899812-chr8:10282419..10282930,2	K562	blood:
11	chr8:10290739..10292284-chr8:10294138..10295858,2	K562	blood:
12	chr8:10302259..10303778-chr8:10306329..10308452,2	K562	blood:
13	chr8:10293147..10295471-chr8:10296811..10299239,2	K562	blood:
14	chr8:10271744..10274704-chr8:10275996..10278041,2	MCF-7	breast:
15	chr8:10306242..10308473-chr8:10310068..10312588,2	K562	blood:
16	chr8:10192939..10195509-chr8:10197374..10200259,2	K562	blood:
17	chr8:10281970..10284229-chr8:10318464..10320467,2	K562	blood:
18	chr8:10295156..10295676-chr9:36400867..36401557,2	MCF-7	breast:
19	chr8:10240370..10243141-chr8:10246978..10249322,2	K562	blood:
20	chr8:10191950..10195260-chr8:10197828..10201461,4	MCF-7	breast:
21	chr8:10271744..10274704-chr8:10275996..10278041,2	MCF-7	breast:
22	chr8:10230455..10233257-chr8:10241195..10243671,2	K562	blood:
23	chr8:10205661..10208295-chr8:10208819..10211116,2	MCF-7	breast:
24	chr8:10230455..10233257-chr8:10241195..10243671,2	K562	blood:
25	chr8:10277398..10280414-chr8:10281254..10284079,3	K562	blood:
26	chr8:10240370..10243141-chr8:10246978..10249322,2	K562	blood:
27	chr8:10203991..10206007-chr8:10207098..10209172,2	K562	blood:
28	chr8:10293147..10295471-chr8:10296811..10299239,2	K562	blood:
29	chr8:10200552..10204035-chr8:10205072..10206852,3	K562	blood:
30	chr8:10194581..10198913-chr8:10201395..10205726,4	K562	blood:
31	chr8:10215726..10218091-chr8:10220767..10222352,2	K562	blood:
32	chr8:10240370..10243141-chr8:10246115..10249322,3	K562	blood:
33	chr8:10300339..10303104-chr8:10303257..10306151,2	K562	blood:
34	chr8:10203991..10206007-chr8:10207098..10209172,2	K562	blood:
35	chr8:10281970..10284229-chr8:10318464..10320467,2	K562	blood:
36	chr8:10205661..10208295-chr8:10208819..10211116,2	MCF-7	breast:
37	chr8:10302259..10303778-chr8:10306329..10308452,2	K562	blood:
38	chr8:10210498..10212696-chr8:10213697..10216016,2	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MSRA-3	chr8:10312147-10312190	NONHSAT124989
2	lnc-MSRA-1	chr8:10291182-10295822	ENSG00000261451.1
3	lnc-MSRA-2	chr8:10305072-10305433	NONHSAT124988
4	lnc-MSRA-1	chr8:10293466-10295495	NONHSAT124987
5	lnc-PRSS55-4	chr8:10268611-10269075	NONHSAT124981
6	lnc-RP1L1-8	chr8:10281418-10284043	NONHSAT124985
7	lnc-MSRA-2	chr8:10305529-10308687	NONHSAT124988

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MSRA	hsa-miR-124-3p	chr8:10286173-10286194
2	MSRA	hsa-miR-124-3p	chr8:10286187-10286194

Variant related genes	Relation type
ENSG00000249848	TF binding region
ENSG00000261451	TF binding region
ENSG00000249848	CpG island
ENSG00000261451	CpG island
ENSG00000249848	chromatin interactions
ENSG00000253641	chromatin interactions
ENSG00000261451	chromatin interactions
ENSG00000137075	chromatin interactions

Extended variants
information (count: 6855 )
Associated
traits (count: 139 )

Variant overlapped rSNPs/rCNVs (count:6855 , 50 per page) page: 1 2 3 4 5 6 7 ... 138

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17708276	chr8:10199548-10199549	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs11994217	chr8:10199582-10199583	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs142106486	chr8:10199591-10199592	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs533675372	chr8:10199612-10199613	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs553798872	chr8:10199632-10199633	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs182198456	chr8:10199673-10199674	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs377560599	chr8:10199681-10199682	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs144365668	chr8:10199697-10199698	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs575523334	chr8:10199703-10199704	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs565628174	chr8:10199747-10199748	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs147824713	chr8:10199775-10199776	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs78139297	chr8:10199783-10199784	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs561128781	chr8:10199845-10199846	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs530076249	chr8:10199871-10199872	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs148895260	chr8:10199872-10199873	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs546794067	chr8:10199906-10199907	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs186472611	chr8:10199915-10199916	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs143611403	chr8:10199933-10199934	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs148069331	chr8:10199952-10199953	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs191318481	chr8:10199954-10199955	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs184586380	chr8:10200007-10200008	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs548416231	chr8:10200020-10200021	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs567982005	chr8:10200035-10200036	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs190483516	chr8:10200036-10200037	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs553938419	chr8:10200040-10200041	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs570561115	chr8:10200060-10200061	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs11777018	chr8:10200082-10200083	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs193070352	chr8:10200108-10200109	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs140924367	chr8:10200111-10200112	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs546063295	chr8:10200131-10200132	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs578141725	chr8:10200143-10200144	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs569714456	chr8:10200149-10200150	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs574773288	chr8:10200174-10200175	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs565163632	chr8:10200204-10200205	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs73195303	chr8:10200253-10200254	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs377086036	chr8:10200254-10200255	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs532459718	chr8:10200278-10200279	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs545848869	chr8:10200293-10200294	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs541404022	chr8:10200311-10200312	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs185313570	chr8:10200318-10200319	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs189825506	chr8:10200359-10200360	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs548224477	chr8:10200370-10200371	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs371055515	chr8:10200391-10200392	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs377310703	chr8:10200449-10200450	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs375578699	chr8:10200481-10200482	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs527345758	chr8:10200513-10200514	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs547408617	chr8:10200528-10200529	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs572591443	chr8:10200531-10200532	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs200645178	chr8:10200543-10200544	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs201267964	chr8:10200547-10200548	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:139)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Epilepsy	20502679	CNVD
Osteosarcoma	21215367	CNVD

Chromatin state (count:1723 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10192600-10206200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr8:10192600-10282400	Weak transcription	Gastric	stomach
3	chr8:10192800-10206400	Weak transcription	Thymus	Thymus
4	chr8:10193000-10215400	Weak transcription	Fetal Intestine Small	intestine
5	chr8:10193000-10235000	Weak transcription	Pancreas	Pancrea
6	chr8:10193200-10203800	Weak transcription	Right Atrium	heart
7	chr8:10193400-10202400	Weak transcription	Right Ventricle	heart
8	chr8:10193600-10200600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:10193600-10202800	Weak transcription	Brain Anterior Caudate	brain
10	chr8:10193600-10220400	Weak transcription	Brain Cingulate Gyrus	brain
11	chr8:10195800-10199600	Enhancers	Fetal Thymus	thymus
12	chr8:10196000-10200000	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr8:10196000-10200000	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr8:10196000-10200800	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr8:10196600-10199600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr8:10196800-10200000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr8:10196800-10208000	Weak transcription	Adipose Nuclei	Adipose
18	chr8:10196800-10214200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr8:10196800-10228000	Weak transcription	Liver	Liver
20	chr8:10197000-10200000	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr8:10197800-10200200	Weak transcription	Fetal Brain Female	brain
22	chr8:10197800-10200400	Weak transcription	Fetal Brain Male	brain
23	chr8:10198400-10206400	Weak transcription	Primary T cells from cord blood	blood
24	chr8:10198800-10199600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr8:10198800-10199800	Enhancers	NHEK	skin
26	chr8:10198800-10202000	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr8:10199000-10200600	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr8:10199000-10201800	Enhancers	H1 Cell Line	embryonic stem cell
29	chr8:10199400-10199800	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr8:10199400-10199800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr8:10199400-10200400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr8:10199400-10201800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr8:10199600-10200600	Enhancers	ES-I3 Cell Line	embryonic stem cell
34	chr8:10199600-10201400	Weak transcription	Aorta	Aorta
35	chr8:10199600-10203600	Weak transcription	Fetal Muscle Leg	muscle
36	chr8:10199600-10206800	Weak transcription	Fetal Thymus	thymus
37	chr8:10199800-10200800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr8:10199800-10201800	Enhancers	HUES6 Cell Line	embryonic stem cell
39	chr8:10200000-10200600	Enhancers	H9 Cell Line	embryonic stem cell
40	chr8:10200000-10200600	Enhancers	iPS-20b Cell Line	embryonic stem cell
41	chr8:10200000-10201800	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr8:10200000-10201800	Enhancers	HUES64 Cell Line	embryonic stem cell
43	chr8:10200000-10201800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr8:10200200-10200600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
45	chr8:10200200-10201200	Enhancers	Fetal Brain Female	brain
46	chr8:10200400-10201200	Enhancers	Fetal Brain Male	brain
47	chr8:10200600-10201000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
48	chr8:10200600-10201000	Flanking Active TSS	H9 Cell Line	embryonic stem cell
49	chr8:10200600-10201000	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
50	chr8:10200600-10201200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links