Variant report

Variant	nsv529717
Chromosome Location	chr15:58519923-58756814
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3974)
CpG islands
(count:1282)
Chromatin interactive
region (count:221)
LncRNA
region (count:36)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3974 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:58562136-58562529	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:58691913-58692310	K562	blood:	n/a	n/a
3	ARID3A	chr15:58702198-58702395	K562	blood:	n/a	n/a
4	ARID3A	chr15:58733286-58733314	K562	blood:	n/a	n/a
5	ARID3A	chr15:58722084-58722767	K562	blood:	n/a	n/a
6	ARID3A	chr15:58755905-58756780	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:58734368-58734618	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:58747156-58747675	HepG2	liver:	n/a	n/a
9	ARID3A	chr15:58749976-58750707	HepG2	liver:	n/a	n/a
10	ARID3A	chr15:58641117-58641120	K562	blood:	n/a	n/a
11	ARID3A	chr15:58622337-58622530	K562	blood:	n/a	n/a
12	ARID3A	chr15:58623672-58624907	K562	blood:	n/a	n/a
13	ARID3A	chr15:58622250-58622584	HepG2	liver:	n/a	n/a
14	ARID3A	chr15:58623578-58625628	HepG2	liver:	n/a	n/a
15	ARID3A	chr15:58643993-58644649	K562	blood:	n/a	n/a
16	ARID3A	chr15:58577390-58578554	HepG2	liver:	n/a	n/a
17	ARID3A	chr15:58712314-58712545	HepG2	liver:	n/a	n/a
18	ARID3A	chr15:58717507-58717628	HepG2	liver:	n/a	n/a
19	ARID3A	chr15:58684725-58684919	K562	blood:	n/a	n/a
20	ARID3A	chr15:58707734-58708189	K562	blood:	n/a	n/a
21	ARID3A	chr15:58731190-58731493	HepG2	liver:	n/a	n/a
22	ARID3A	chr15:58723845-58724674	HepG2	liver:	n/a	n/a
23	ARID3A	chr15:58571954-58572275	K562	blood:	n/a	n/a
24	ARID3A	chr15:58704468-58704476	K562	blood:	n/a	n/a
25	ARID3A	chr15:58588664-58588750	K562	blood:	n/a	n/a
26	ARID3A	chr15:58574582-58574862	HepG2	liver:	n/a	n/a
27	ARID3A	chr15:58595753-58595843	K562	blood:	n/a	n/a
28	ATF1	chr15:58572016-58572141	K562	blood:	n/a	n/a
29	ATF1	chr15:58696266-58696625	K562	blood:	n/a	n/a
30	ATF1	chr15:58623866-58624808	K562	blood:	n/a	n/a
31	ATF1	chr15:58705605-58705761	K562	blood:	n/a	n/a
32	ATF1	chr15:58562243-58562505	K562	blood:	n/a	n/a
33	ATF1	chr15:58692021-58692250	K562	blood:	n/a	n/a
34	ATF1	chr15:58636458-58636758	K562	blood:	n/a	n/a
35	ATF1	chr15:58749705-58749952	K562	blood:	n/a	n/a
36	ATF1	chr15:58649514-58650152	K562	blood:	n/a	n/a
37	ATF1	chr15:58541837-58542139	K562	blood:	n/a	n/a
38	ATF1	chr15:58684903-58685238	K562	blood:	n/a	n/a
39	ATF1	chr15:58644160-58644708	K562	blood:	n/a	n/a
40	ATF1	chr15:58722141-58722665	K562	blood:	n/a	n/a
41	ATF2	chr15:58661588-58661966	GM12878	blood:	n/a	n/a
42	ATF2	chr15:58746536-58747070	GM12878	blood:	n/a	n/a
43	ATF2	chr15:58749604-58750667	GM12878	blood:	n/a	n/a
44	ATF2	chr15:58624162-58624763	GM12878	blood:	n/a	n/a
45	ATF2	chr15:58562174-58562521	H1-hESC	embryonic stem cell:	n/a	n/a
46	ATF2	chr15:58623972-58624957	GM12878	blood:	n/a	n/a
47	ATF2	chr15:58749559-58750757	GM12878	blood:	n/a	n/a
48	ATF2	chr15:58746518-58747031	GM12878	blood:	n/a	n/a
49	ATF2	chr15:58712602-58713391	GM12878	blood:	n/a	n/a
50	ATF3	chr15:58624421-58624746	K562	blood:	n/a	n/a

(count:1282 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:58699976-58700026	AG09309	skin:	n/a
2	chr15:58699976-58700026	AG09309	skin:	n/a
3	chr15:58600237-58600287	SK-N-MC	brain:	n/a
4	chr15:58732754-58732804	HIPEpiC	eye:	n/a
5	chr15:58723879-58723929	HNPCEpiC	eye:	n/a
6	chr15:58600237-58600287	AG09309	skin:	n/a
7	chr15:58724225-58724275	AG09309	skin:	n/a
8	chr15:58636570-58636620	HRE	kidney:	n/a
9	chr15:58540402-58540452	Hepatocyte	liver:	n/a
10	chr15:58653220-58653270	AG04449	skin:	fetal
11	chr15:58624344-58624394	HRCEpiC	kidney:	n/a
12	chr15:58699976-58700026	T-47D	breast:	n/a
13	chr15:58653220-58653270	BJ	skin:	n/a
14	chr15:58735214-58735264	Hepatocyte	liver:	n/a
15	chr15:58732754-58732804	T-47D	breast:	n/a
16	chr15:58636570-58636620	AG09319	gingival:	n/a
17	chr15:58624344-58624394	HMEC	breast:	n/a
18	chr15:58540402-58540452	SK-N-SH_RA	brain:	n/a
19	chr15:58624534-58624584	LNCaP	prostate:	n/a
20	chr15:58724041-58724091	HCM	heart:	n/a
21	chr15:58723851-58723901	H1-hESC	embryonic stem cell:	embryo
22	chr15:58723851-58723901	HIPEpiC	eye:	n/a
23	chr15:58624534-58624584	HCF	heart:	n/a
24	chr15:58553983-58554033	H1-hESC	embryonic stem cell:	embryo
25	chr15:58650472-58650522	AoSMC	blood vessel:	n/a
26	chr15:58733736-58733786	PFSK-1	brain:	n/a
27	chr15:58552619-58552669	ovcar-3	ovarian:	n/a
28	chr15:58723879-58723929	HCM	heart:	n/a
29	chr15:58723879-58723929	NB4	blood:	n/a
30	chr15:58674907-58674957	SAEC	small airway:	n/a
31	chr15:58650472-58650522	HEK293	kidney:	embryo
32	chr15:58553983-58554033	K562	blood:	n/a
33	chr15:58733736-58733786	AG10803	skin:	n/a
34	chr15:58688847-58688897	AG09319	gingival:	n/a
35	chr15:58552619-58552669	AoSMC	blood vessel:	n/a
36	chr15:58732754-58732804	AG09319	gingival:	n/a
37	chr15:58733736-58733786	Hela-S3	cervix:	n/a
38	chr15:58540402-58540452	HEEpiC	esophagus:	n/a
39	chr15:58552619-58552669	HCT-116	colon:	n/a
40	chr15:58723879-58723929	BJ	skin:	n/a
41	chr15:58699976-58700026	HL-60	blood:	n/a
42	chr15:58733736-58733786	T-47D	breast:	n/a
43	chr15:58540402-58540452	NH-A	brain:	n/a
44	chr15:58699976-58700026	AG04450	lung:	fetal
45	chr15:58723657-58723707	SK-N-SH_RA	brain:	n/a
46	chr15:58733736-58733786	H1-hESC	embryonic stem cell:	embryo
47	chr15:58735214-58735264	BJ	skin:	n/a
48	chr15:58723879-58723929	PFSK-1	brain:	n/a
49	chr15:58653220-58653270	AG10803	skin:	n/a
50	chr15:58724225-58724275	HRCEpiC	kidney:	n/a

(count:221 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr15:58505038..58505764-chr15:58519727..58520416,2	K562	blood:
2	chr15:58343646..58346573-chr15:58595833..58597683,2	K562	blood:
3	chr15:58555185..58557970-chr15:58559475..58563925,5	K562	blood:
4	chr15:58566466..58569601-chr15:58576243..58578947,3	K562	blood:
5	chr15:58713103..58715507-chr15:58716251..58718186,2	MCF-7	breast:
6	chr15:58553979..58557970-chr15:58560575..58563562,3	K562	blood:
7	chr15:58621484..58623793-chr15:58637642..58640448,2	K562	blood:
8	chr15:58559095..58562120-chr15:58564838..58568362,3	K562	blood:
9	chr15:58624557..58626281-chr15:58684257..58686056,2	K562	blood:
10	chr15:58647497..58650190-chr15:58651237..58653668,2	MCF-7	breast:
11	chr15:58516526..58518271-chr15:58524056..58526534,2	K562	blood:
12	chr15:58613127..58614752-chr15:58622762..58624285,2	K562	blood:
13	chr15:58622107..58624468-chr15:58635303..58638116,2	MCF-7	breast:
14	chr15:58596834..58598473-chr15:58598758..58600301,2	MCF-7	breast:
15	chr15:58625329..58627247-chr15:58636913..58638829,3	MCF-7	breast:
16	chr15:58612654..58614293-chr15:58650155..58652635,2	K562	blood:
17	chr15:58518907..58522119-chr15:58624457..58627687,4	K562	blood:
18	chr15:58688310..58690112-chr15:58694254..58696812,2	K562	blood:
19	chr15:58726222..58728488-chr15:58751000..58752953,2	K562	blood:
20	chr15:58622254..58626014-chr15:59062445..59064794,4	K562	blood:
21	chr15:58566466..58568855-chr15:58576243..58578947,2	K562	blood:
22	chr15:58662950..58665137-chr15:58667049..58668717,2	K562	blood:
23	chr15:58647497..58650190-chr15:58651237..58653668,2	MCF-7	breast:
24	chr15:58621394..58622984-chr15:59063185..59064722,2	MCF-7	breast:
25	chr15:58559923..58562292-chr15:58623046..58626671,3	K562	blood:
26	chr15:58750305..58752654-chr15:58755983..58757859,3	K562	blood:
27	chr15:58583697..58586466-chr15:58588666..58590311,2	K562	blood:
28	chr15:58513464..58515183-chr15:58519032..58521453,2	K562	blood:
29	chr15:58536983..58538802-chr15:58544796..58547035,2	K562	blood:
30	chr15:58626290..58628080-chr15:58631126..58633534,2	MCF-7	breast:
31	chr15:58647611..58649927-chr15:58650284..58652230,2	K562	blood:
32	chr15:58624606..58626295-chr15:58688208..58690512,2	MCF-7	breast:
33	chr15:58726222..58728488-chr15:58751000..58752953,2	K562	blood:
34	chr15:58673814..58676049-chr15:58689856..58692132,2	K562	blood:
35	chr15:58540620..58543105-chr15:58543383..58546142,2	K562	blood:
36	chr15:58622487..58624173-chr15:58685578..58687624,2	K562	blood:
37	chr15:58684651..58686772-chr15:58697716..58700224,2	K562	blood:
38	chr15:58519770..58521503-chr15:58715577..58717727,2	K562	blood:
39	chr15:58739121..58741793-chr15:58746543..58749268,3	K562	blood:
40	chr15:58684651..58686772-chr15:58697716..58700224,2	K562	blood:
41	chr15:58726654..58728474-chr15:58730449..58733344,2	MCF-7	breast:
42	chr15:58560557..58563297-chr15:59039690..59042665,2	MCF-7	breast:
43	chr15:58595612..58601278-chr15:58601529..58605992,7	K562	blood:
44	chr15:58588436..58590759-chr15:58624393..58625970,2	K562	blood:
45	chr15:58685079..58687364-chr15:58694601..58697474,2	K562	blood:
46	chr15:58626290..58628080-chr15:58631126..58633534,2	MCF-7	breast:
47	chr15:58667019..58669946-chr15:58696068..58697901,2	K562	blood:
48	chr15:58670858..58672854-chr15:58678290..58681276,2	MCF-7	breast:
49	chr15:58558694..58560584-chr15:58661911..58664219,2	K562	blood:
50	chr15:58621143..58623301-chr15:58640418..58642219,2	MCF-7	breast:

(count:36 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ADAM10-9	chr15:58534096-58534194	NONHSAT044103
2	lnc-ADAM10-9	chr15:58712170-58712304	NONHSAT044093
3	lnc-AQP9-5	chr15:58702780-58703017	NONHSAT044110
4	lnc-ADAM10-9	chr15:58549647-58549754	NONHSAT044106
5	lnc-ADAM10-9	chr15:58549625-58549754	NONHSAT044105
6	lnc-AQP9-4	chr15:58608071-58608218	ucscGeneNc_uc002ags_1
7	lnc-ADAM10-2	chr15:58576166-58576553	NONHSAT044109
8	lnc-ADAM10-9	chr15:58571373-58571426	NONHSAT044095
9	lnc-ALDH1A2-1	chr15:58727089-58729111	ENSG00000259293.1
10	lnc-ADAM10-9	chr15:58550341-58550438	NONHSAT044105
11	lnc-ADAM10-2	chr15:58575094-58575190	NONHSAT044109
12	lnc-ADAM10-9	chr15:58538382-58538501	NONHSAT044105
13	lnc-ADAM10-9	chr15:58538382-58538501	NONHSAT044104
14	lnc-ADAM10-9	chr15:58623378-58623829	NONHSAT044104
15	lnc-ADAM10-9	chr15:58571373-58571479	NONHSAT044089
16	lnc-ADAM10-9	chr15:58551029-58551250	NONHSAT044105
17	lnc-AQP9-4	chr15:58568015-58568082	ucscGeneNc_uc002ags_1
18	lnc-ADAM10-2	chr15:58575124-58575190	XLOC_011486
19	lnc-AQP9-4	chr15:58558672-58558889	ucscGeneNc_uc002ags_1
20	lnc-ADAM10-2	chr15:58572415-58572683	XLOC_011486
21	lnc-ADAM10-2	chr15:58576166-58576475	XLOC_011486
22	lnc-ADAM10-9	chr15:58538334-58538464	NONHSAT140242
23	lnc-AQP9-5	chr15:58723026-58723350	NONHSAT044110
24	lnc-ADAM10-9	chr15:58550341-58550438	NONHSAT044107
25	lnc-AQP9-4	chr15:58589899-58590024	ucscGeneNc_uc002ags_1
26	lnc-ADAM10-9	chr15:58534099-58534194	NONHSAT140242
27	lnc-AQP9-4	chr15:58599457-58599760	ucscGeneNc_uc002ags_1
28	lnc-AQP9-5	chr15:58724192-58724562	NONHSAT044110
29	lnc-ADAM10-9	chr15:58538334-58538501	NONHSAT044103
30	lnc-AQP9-4	chr15:58609377-58610458	ucscGeneNc_uc002ags_1
31	lnc-ADAM10-9	chr15:58623378-58623578	NONHSAT044107
32	lnc-ADAM10-9	chr15:58623378-58623663	NONHSAT044106
33	lnc-ADAM10-9	chr15:58549647-58549754	NONHSAT044107
34	lnc-AQP9-3	chr15:58536452-58536790	NONHSAT044102
35	lnc-ADAM10-9	chr15:58549625-58549747	NONHSAT044103
36	lnc-AQP9-3	chr15:58534317-58534402	NONHSAT044102

No data

Variant related genes	Relation type
LIPC	TF binding region
ALDH1A2	TF binding region
LIPC	CpG island
ALDH1A2	CpG island
ENSG00000199568	chromatin interactions
ENSG00000128918	chromatin interactions
ENSG00000259285	chromatin interactions
ENSG00000137776	chromatin interactions
ENSG00000233720	chromatin interactions
ENSG00000137845	chromatin interactions
ENSG00000166035	chromatin interactions
ENSG00000128923	chromatin interactions
ENSG00000259476	chromatin interactions
ENSG00000245975	chromatin interactions
ENSG00000143756	chromatin interactions

Extended variants
information (count: 11293 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:11293 , 50 per page) page: 1 2 3 4 5 6 7 ... 226

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540845257	chr15:58519968-58519969	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs540002831	chr15:58519969-58519970	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs560345119	chr15:58519991-58519992	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs369482169	chr15:58520006-58520007	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs559896691	chr15:58520025-58520026	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs376640175	chr15:58520035-58520036	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs113970858	chr15:58520049-58520050	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs542354049	chr15:58520061-58520062	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs190259381	chr15:58520064-58520065	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs111825993	chr15:58520066-58520067	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs141638450	chr15:58520074-58520075	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs551358455	chr15:58520086-58520087	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs200937318	chr15:58520121-58520122	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs181912760	chr15:58520122-58520123	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs28483615	chr15:58520142-58520143	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs547345849	chr15:58520171-58520172	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs567068694	chr15:58520175-58520176	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs536089109	chr15:58520180-58520181	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs549171542	chr15:58520181-58520182	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs569339262	chr15:58520183-58520184	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs185661021	chr15:58520201-58520202	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs11631950	chr15:58520259-58520260	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs577647312	chr15:58520267-58520268	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs533811212	chr15:58520269-58520270	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs567717455	chr15:58520379-58520380	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs553694241	chr15:58520385-58520386	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs573744735	chr15:58520391-58520392	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs189469973	chr15:58520521-58520522	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs16939944	chr15:58520525-58520526	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs576108865	chr15:58520536-58520537	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs544812234	chr15:58520538-58520539	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs376790617	chr15:58520542-58520543	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs150498942	chr15:58520547-58520548	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs527329527	chr15:58520550-58520551	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs376534883	chr15:58520563-58520564	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs376813086	chr15:58520575-58520576	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs73412431	chr15:58520585-58520586	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs550557674	chr15:58520630-58520631	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs372285472	chr15:58520672-58520673	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs114683191	chr15:58520717-58520718	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs7173910	chr15:58520718-58520719	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs142751839	chr15:58520719-58520720	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs569217517	chr15:58520761-58520762	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs368240626	chr15:58520776-58520777	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs531813725	chr15:58520786-58520787	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs180750704	chr15:58520864-58520865	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs571302383	chr15:58520871-58520872	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs533971438	chr15:58520879-58520880	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs6493989	chr15:58520904-58520905	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs567552940	chr15:58520905-58520906	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Pancreatic cancer	17952125	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Autism	21865298	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3651 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:58506600-58520200	Weak transcription	Liver	Liver
2	chr15:58514000-58520400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr15:58515400-58520800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr15:58516400-58520200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr15:58516600-58520200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr15:58516600-58520200	Weak transcription	NHDF-Ad	bronchial
7	chr15:58516600-58520200	Weak transcription	NHEK	skin
8	chr15:58516600-58520400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr15:58516600-58520400	Weak transcription	Right Ventricle	heart
10	chr15:58516600-58520400	Weak transcription	NHLF	lung
11	chr15:58516600-58520600	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr15:58516600-58520600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr15:58516600-58520600	Weak transcription	Spleen	Spleen
14	chr15:58516600-58520600	Weak transcription	Osteobl	bone
15	chr15:58516600-58520800	Weak transcription	Fetal Lung	lung
16	chr15:58516600-58520800	Weak transcription	Fetal Stomach	stomach
17	chr15:58516600-58521000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr15:58516800-58520200	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr15:58516800-58520400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr15:58516800-58520400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr15:58516800-58520400	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr15:58516800-58520400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr15:58516800-58520400	Weak transcription	Left Ventricle	heart
24	chr15:58516800-58520400	Weak transcription	Right Atrium	heart
25	chr15:58516800-58520400	Weak transcription	HMEC	breast
26	chr15:58516800-58520400	Weak transcription	HSMM	muscle
27	chr15:58516800-58520600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr15:58516800-58520600	Weak transcription	Brain Angular Gyrus	brain
29	chr15:58516800-58520600	Weak transcription	Brain Anterior Caudate	brain
30	chr15:58516800-58521000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr15:58517000-58520000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr15:58517000-58520200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr15:58517000-58520400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr15:58517000-58520400	Weak transcription	Brain Cingulate Gyrus	brain
35	chr15:58517000-58520400	Weak transcription	Brain Hippocampus Middle	brain
36	chr15:58517000-58520600	Weak transcription	Brain Substantia Nigra	brain
37	chr15:58517000-58520800	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr15:58517000-58520800	Weak transcription	Adipose Nuclei	Adipose
39	chr15:58518800-58520800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr15:58519200-58520400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr15:58519200-58520400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr15:58519200-58520400	Weak transcription	Fetal Muscle Leg	muscle
43	chr15:58519200-58520800	Weak transcription	Fetal Muscle Trunk	muscle
44	chr15:58519200-58522600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr15:58519600-58520000	Weak transcription	Fetal Heart	heart
46	chr15:58519800-58521200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr15:58520000-58521000	Enhancers	Fetal Heart	heart
48	chr15:58520000-58521200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr15:58520200-58520600	Enhancers	iPS-15b Cell Line	embryonic stem cell
50	chr15:58520200-58520600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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