Variant report

Variant	nsv532712
Chromosome Location	chr17:37521822-37768345
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4149)
CpG islands
(count:6231)
Chromatin interactive
region (count:255)
LncRNA
region (count:53)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4149 , 50 per page) page: 1 2 3 4 5 6 7 ... 83

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr17:37617237-37617996	HepG2	liver:	n/a	n/a
2	ARID3A	chr17:37683549-37683811	K562	blood:	n/a	n/a
3	ARID3A	chr17:37609793-37610617	HepG2	liver:	n/a	n/a
4	ARID3A	chr17:37610794-37610801	K562	blood:	n/a	n/a
5	ARID3A	chr17:37683537-37683775	HepG2	liver:	n/a	n/a
6	ARID3A	chr17:37704170-37704517	HepG2	liver:	n/a	n/a
7	ARID3A	chr17:37560875-37561100	K562	blood:	n/a	n/a
8	ARID3A	chr17:37557908-37557962	K562	blood:	n/a	n/a
9	ARID3A	chr17:37692731-37693130	K562	blood:	n/a	n/a
10	ARID3A	chr17:37672328-37672332	K562	blood:	n/a	n/a
11	ARID3A	chr17:37607213-37607825	HepG2	liver:	n/a	n/a
12	ARID3A	chr17:37685775-37686143	K562	blood:	n/a	n/a
13	ATF1	chr17:37617434-37617880	K562	blood:	n/a	n/a
14	ATF1	chr17:37695219-37695439	K562	blood:	n/a	n/a
15	ATF1	chr17:37558748-37559124	K562	blood:	n/a	n/a
16	ATF1	chr17:37533421-37533683	K562	blood:	n/a	n/a
17	ATF1	chr17:37692738-37693135	K562	blood:	n/a	n/a
18	ATF2	chr17:37640337-37640878	GM12878	blood:	n/a	n/a
19	ATF2	chr17:37711570-37711908	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr17:37649791-37650087	GM12878	blood:	n/a	n/a
21	ATF2	chr17:37617278-37618056	GM12878	blood:	n/a	n/a
22	ATF2	chr17:37617329-37618114	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr17:37558653-37559097	GM12878	blood:	n/a	chr17:37558920-37558931
24	ATF2	chr17:37558781-37559139	H1-hESC	embryonic stem cell:	n/a	chr17:37558920-37558931
25	ATF2	chr17:37558738-37559198	H1-hESC	embryonic stem cell:	n/a	chr17:37558920-37558931
26	ATF2	chr17:37617314-37617968	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF2	chr17:37533493-37533780	GM12878	blood:	n/a	n/a
28	ATF2	chr17:37607312-37607810	GM12878	blood:	n/a	n/a
29	ATF2	chr17:37607147-37607880	GM12878	blood:	n/a	n/a
30	ATF2	chr17:37558778-37559146	GM12878	blood:	n/a	chr17:37558920-37558931
31	ATF2	chr17:37617268-37618008	GM12878	blood:	n/a	n/a
32	ATF2	chr17:37640316-37640820	GM12878	blood:	n/a	n/a
33	ATF2	chr17:37533486-37533713	GM12878	blood:	n/a	n/a
34	ATF2	chr17:37607337-37607753	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr17:37607114-37607820	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF3	chr17:37617304-37617862	K562	blood:	n/a	n/a
37	ATF3	chr17:37557694-37558388	A549	lung:	n/a	chr17:37557759-37557773 chr17:37558331-37558340 chr17:37557761-37557772
38	ATF3	chr17:37560841-37561158	K562	blood:	n/a	n/a
39	ATF3	chr17:37617283-37618037	A549	lung:	n/a	n/a
40	ATF3	chr17:37607161-37607827	A549	lung:	n/a	n/a
41	ATF3	chr17:37617260-37617956	A549	lung:	n/a	n/a
42	ATF3	chr17:37617341-37617614	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr17:37761753-37762227	H1-hESC	embryonic stem cell:	n/a	n/a
44	BACH1	chr17:37563610-37564398	K562	blood:	n/a	n/a
45	BACH1	chr17:37557877-37558414	H1-hESC	embryonic stem cell:	n/a	n/a
46	BACH1	chr17:37760079-37760255	H1-hESC	embryonic stem cell:	n/a	n/a
47	BACH1	chr17:37748626-37748801	H1-hESC	embryonic stem cell:	n/a	n/a
48	BACH1	chr17:37558061-37558365	K562	blood:	n/a	n/a
49	BACH1	chr17:37736123-37736323	H1-hESC	embryonic stem cell:	n/a	n/a
50	BACH1	chr17:37757694-37757996	H1-hESC	embryonic stem cell:	n/a	n/a

(count:6231 , 50 per page) page: 1 2 3 4 5 6 7 ... 125

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:37618498-37618548	AG04449	skin:	fetal
2	chr17:37755091-37755141	GM12892	blood:	n/a
3	chr17:37762953-37763003	HRCEpiC	kidney:	n/a
4	chr17:37761316-37761366	LNCaP	prostate:	n/a
5	chr17:37753772-37753822	NT2-D1	testis:	n/a
6	chr17:37762367-37762417	GM12892	blood:	n/a
7	chr17:37760830-37760880	ovcar-3	ovarian:	n/a
8	chr17:37764250-37764300	GM12891	blood:	n/a
9	chr17:37688455-37688505	ECC-1	luminal epithelium:	n/a
10	chr17:37618498-37618548	AG04449	skin:	fetal
11	chr17:37755091-37755141	GM12892	blood:	n/a
12	chr17:37762953-37763003	HRCEpiC	kidney:	n/a
13	chr17:37761316-37761366	LNCaP	prostate:	n/a
14	chr17:37753772-37753822	NT2-D1	testis:	n/a
15	chr17:37762367-37762417	GM12892	blood:	n/a
16	chr17:37760830-37760880	ovcar-3	ovarian:	n/a
17	chr17:37764250-37764300	GM12891	blood:	n/a
18	chr17:37688455-37688505	ECC-1	luminal epithelium:	n/a
19	chr17:37762960-37763010	CMK	blood:	n/a
20	chr17:37762953-37763003	AoSMC	blood vessel:	n/a
21	chr17:37617702-37617752	T-47D	breast:	n/a
22	chr17:37607460-37607510	HCF	heart:	n/a
23	chr17:37622035-37622085	AG04449	skin:	fetal
24	chr17:37755498-37755548	Jurkat	blood:	n/a
25	chr17:37762842-37762892	PANC-1	pancreas:	n/a
26	chr17:37764503-37764553	NH-A	brain:	n/a
27	chr17:37725898-37725948	HEK293	kidney:	embryo
28	chr17:37760173-37760223	HRPEpiC	eye:	n/a
29	chr17:37611403-37611453	HEK293	kidney:	embryo
30	chr17:37749866-37749916	SKMC	muscle:	n/a
31	chr17:37608096-37608146	HIPEpiC	eye:	n/a
32	chr17:37755891-37755941	HEK293	kidney:	embryo
33	chr17:37730188-37730238	AG10803	skin:	n/a
34	chr17:37764118-37764168	Hela-S3	cervix:	n/a
35	chr17:37755498-37755548	HPAEpiC	pulmonary alveolar:	n/a
36	chr17:37688455-37688505	Hela-S3	cervix:	n/a
37	chr17:37753860-37753910	NB4	blood:	n/a
38	chr17:37763854-37763904	BE2_C	brain:	n/a
39	chr17:37749866-37749916	SAEC	small airway:	n/a
40	chr17:37618454-37618504	AG09309	skin:	n/a
41	chr17:37730450-37730500	HCT-116	colon:	n/a
42	chr17:37617470-37617520	GM19239	blood:	n/a
43	chr17:37607661-37607711	PrEC	prostate:	n/a
44	chr17:37607661-37607711	SAEC	small airway:	n/a
45	chr17:37764158-37764208	CMK	blood:	n/a
46	chr17:37561101-37561151	AG09319	gingival:	n/a
47	chr17:37760359-37760409	NH-A	brain:	n/a
48	chr17:37754160-37754210	T-47D	breast:	n/a
49	chr17:37558512-37558562	HAEpiC	amniotic membrane:	n/a
50	chr17:37753772-37753822	ovcar-3	ovarian:	n/a

(count:255 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr17:37724544..37726432-chr17:37727779..37730612,3	K562	blood:
2	chr17:37553969..37556475-chr17:37564742..37566292,2	MCF-7	breast:
3	chr17:37520195..37522165-chr17:37528962..37530687,2	K562	blood:
4	chr17:37678990..37682244-chr17:37684077..37686277,3	K562	blood:
5	chr17:37759878..37762418-chr17:37771643..37773208,2	MCF-7	breast:
6	chr17:37626559..37628747-chr17:37630486..37632381,2	K562	blood:
7	chr17:37395833..37396511-chr17:37683200..37684128,2	K562	blood:
8	chr17:37531290..37534298-chr17:37556765..37559429,3	K562	blood:
9	chr17:37673655..37675893-chr17:37909404..37912318,2	K562	blood:
10	chr17:37526319..37527863-chr17:37532918..37534625,2	K562	blood:
11	chr17:37682821..37683713-chr17:37704156..37704663,2	MCF-7	breast:
12	chr17:37724265..37726449-chr17:37726824..37730353,3	MCF-7	breast:
13	chr17:37758299..37760828-chr17:37823916..37825450,2	K562	blood:
14	chr17:37558046..37560513-chr17:37618959..37620951,2	MCF-7	breast:
15	chr17:37554166..37559579-chr17:37560149..37566486,7	MCF-7	breast:
16	chr17:37649769..37652611-chr17:37670214..37672118,2	MCF-7	breast:
17	chr17:37710067..37711965-chr17:37714224..37715872,2	MCF-7	breast:
18	chr17:37618876..37620514-chr17:37643211..37645194,2	K562	blood:
19	chr17:37728614..37731530-chr17:37739206..37742056,2	MCF-7	breast:
20	chr17:37558229..37558889-chr22:41842489..41843313,2	Hela-S3	cervix:
21	chr17:37563339..37564001-chr17:37703830..37704468,2	MCF-7	breast:
22	chr17:37756158..37758402-chr17:37760489..37762828,2	K562	blood:
23	chr17:37617160..37618090-chr8:132915947..132916726,2	NB4	blood:
24	chr17:37618970..37621039-chr17:37622079..37624596,3	MCF-7	breast:
25	chr17:37605291..37610010-chr17:37614517..37620203,14	MCF-7	breast:
26	chr17:37720810..37722630-chr17:37726037..37729027,2	MCF-7	breast:
27	chr17:37730305..37732141-chr17:37773715..37775844,2	MCF-7	breast:
28	chr17:37399360..37401655-chr17:37617995..37620888,2	K562	blood:
29	chr17:37595282..37597201-chr17:37602634..37604222,2	K562	blood:
30	chr17:37560896..37563605-chr17:37565302..37568802,4	K562	blood:
31	chr17:37707289..37708873-chr17:38136097..38138818,2	K562	blood:
32	chr17:37712634..37715258-chr17:37722125..37724852,3	K562	blood:
33	chr17:37692279..37694246-chr17:37696779..37699542,2	K562	blood:
34	chr17:37753002..37755741-chr17:37759105..37761390,2	K562	blood:
35	chr17:37618143..37619804-chr17:37685071..37687650,2	K562	blood:
36	chr17:37570932..37573851-chr17:37579620..37582741,3	K562	blood:
37	chr17:37523892..37526303-chr17:37526721..37528394,2	K562	blood:
38	chr17:37564156..37567472-chr17:37576969..37579923,3	K562	blood:
39	chr17:37691695..37694663-chr17:37844088..37846895,3	K562	blood:
40	chr17:37545491..37547007-chr17:37552307..37553903,2	K562	blood:
41	chr17:37588413..37592945-chr17:37606057..37608172,4	K562	blood:
42	chr17:37724500..37726432-chr17:37727779..37730612,3	K562	blood:
43	chr17:37590764..37593406-chr17:37596883..37598873,2	K562	blood:
44	chr17:37617575..37619643-chr17:37685798..37687650,2	K562	blood:
45	chr17:37724544..37726432-chr17:37727779..37730612,3	K562	blood:
46	chr17:37678954..37681636-chr17:37690664..37692271,2	K562	blood:
47	chr17:37556913..37559429-chr17:37617747..37620632,2	K562	blood:
48	chr17:37426999..37427507-chr17:37549934..37550612,2	K562	blood:
49	chr17:37758356..37760181-chr17:37774194..37775834,2	MCF-7	breast:
50	chr17:37704224..37704823-chr17:37731490..37732250,2	K562	blood:

(count:53 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CDK12-1	chr17:37707291-37707395	NONHSAT053450
2	lnc-CDK12-1	chr17:37707291-37707395	XLOC_012192
3	lnc-CDK12-1	chr17:37721013-37721117	XLOC_012192
4	lnc-CDK12-1	chr17:37712562-37712666	NONHSAT053456
5	lnc-CDK12-1	chr17:37723041-37723799	XLOC_012192
6	lnc-FBXL20-2	chr17:37587368-37587489	NONHSAT053443
7	lnc-CDK12-1	chr17:37723041-37723895	XLOC_012192
8	lnc-CDK12-1	chr17:37723041-37723799	XLOC_012192
9	lnc-CDK12-1	chr17:37704074-37704083	NONHSAT053448
10	lnc-CDK12-1	chr17:37706308-37707184	NONHSAT053446
11	lnc-CDK12-1	chr17:37727663-37728388	NONHSAT053446
12	lnc-CDK12-1	chr17:37712539-37712666	NONHSAT053450
13	lnc-CDK12-1	chr17:37712539-37712666	NONHSAT053446
14	lnc-CDK12-1	chr17:37713634-37714189	NONHSAT053446
15	lnc-CDK12-1	chr17:37700444-37700613	NONHSAT053446
16	lnc-CDK12-1	chr17:37707291-37707395	NONHSAT053448
17	lnc-NEUROD2-1	chr17:37750971-37751159	XLOC_012462
18	lnc-NEUROD2-1	chr17:37753794-37754003	XLOC_012462
19	lnc-CDK12-1	chr17:37721013-37721117	NONHSAT053456
20	lnc-NEUROD2-1	chr17:37754115-37754703	XLOC_012462
21	lnc-CDK12-1	chr17:37723041-37723812	NONHSAT053457
22	lnc-CDK12-1	chr17:37721024-37721167	XLOC_012192
23	lnc-CDK12-2	chr17:37558046-37558151	ENSG00000266469.1
24	lnc-CDK12-1	chr17:37712539-37712666	XLOC_012192
25	lnc-CDK12-1	chr17:37714932-37715355	NONHSAT053446
26	lnc-CDK12-1	chr17:37720419-37721117	NONHSAT053457
27	lnc-FBXL20-2	chr17:37583699-37584043	NONHSAT053443
28	lnc-CDK12-1	chr17:37721013-37721160	NONHSAT053448
29	lnc-CDK12-1	chr17:37713117-37713311	NONHSAT053448
30	lnc-MED1-3	chr17:37680925-37681246	expReg_chr17_6749_-
31	lnc-CDK12-1	chr17:37702870-37702935	NONHSAT053445
32	lnc-CDK12-1	chr17:37712539-37712666	XLOC_012192
33	lnc-MED1-2	chr17:37679969-37680790	expReg_chr17_6748_-
34	lnc-CDK12-1	chr17:37707318-37707395	XLOC_012192
35	lnc-CDK12-1	chr17:37712539-37712666	NONHSAT053453
36	lnc-CDK12-1	chr17:37723047-37723597	NONHSAT053446
37	lnc-CDK12-1	chr17:37721013-37721167	NONHSAT053453
38	lnc-CDK12-1	chr17:37700244-37700613	NONHSAT053445
39	lnc-MED1-1	chr17:37678161-37678653	expReg_chr17_6739_-
40	lnc-CDK12-1	chr17:37707315-37707395	NONHSAT053453
41	lnc-CDK12-1	chr17:37723041-37723729	XLOC_012192
42	lnc-CDK12-1	chr17:37706444-37706694	NONHSAT053450
43	lnc-CDK12-1	chr17:37721013-37721160	NONHSAT053446
44	lnc-CDK12-1	chr17:37721013-37723798	XLOC_012192
45	lnc-CDK12-1	chr17:37707343-37707395	XLOC_012192
46	lnc-CDK12-1	chr17:37706690-37706694	XLOC_012192
47	lnc-CDK12-1	chr17:37723041-37723814	NONHSAT053453
48	lnc-CDK12-1	chr17:37707291-37707748	NONHSAT053446
49	lnc-CDK12-1	chr17:37723041-37723814	NONHSAT053456
50	lnc-CDK12-1	chr17:37712539-37712666	NONHSAT053448

No data

Variant related genes	Relation type
NEUROD2	TF binding region
ENSG00000266469	TF binding region
MED1	TF binding region
CDK12	TF binding region
RNU6-981P	TF binding region
FBXL20	TF binding region
RNU6-233P	TF binding region
NEUROD2	CpG island
ENSG00000266469	CpG island
MED1	CpG island
CDK12	CpG island
RNU6-981P	CpG island
FBXL20	CpG island
RNU6-233P	CpG island
ENSG00000167258	chromatin interactions
ENSG00000108306	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000108298	chromatin interactions
ENSG00000067191	chromatin interactions
ENSG00000130724	chromatin interactions
ENSG00000125686	chromatin interactions
ENSG00000141744	chromatin interactions
ENSG00000132294	chromatin interactions
ENSG00000204952	chromatin interactions
ENSG00000183864	chromatin interactions
ENSG00000145592	chromatin interactions
ENSG00000271361	chromatin interactions
ENSG00000108296	chromatin interactions
ENSG00000131771	chromatin interactions
ENSG00000263791	chromatin interactions
ENSG00000265460	chromatin interactions
ENSG00000131748	chromatin interactions
ENSG00000108344	chromatin interactions
ENSG00000266469	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000214546	chromatin interactions
ENSG00000112237	chromatin interactions
ENSG00000161395	chromatin interactions
ENSG00000149016	chromatin interactions
ENSG00000173991	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000168291	chromatin interactions
ENSG00000114346	chromatin interactions
ENSG00000201086	chromatin interactions
ENSG00000188725	chromatin interactions
ENSG00000171532	chromatin interactions
ENSG00000141736	chromatin interactions
CD46	miRNA target sites
ENPP5	miRNA target sites
ENDOD1	miRNA target sites
C1orf43	miRNA target sites
STX2	miRNA target sites
PTPDC1	miRNA target sites
STX1B	miRNA target sites
ENPEP	miRNA target sites

Extended variants
information (count: 9162 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:9162 , 50 per page) page: 1 2 3 4 5 6 7 ... 184

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200908877	chr17:37521862-37521863	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs35269184	chr17:37521871-37521872	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs11305110	chr17:37521892-37521893	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs200078848	chr17:37521897-37521898	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs528782810	chr17:37521898-37521899	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs561205589	chr17:37521912-37521913	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs546855941	chr17:37521994-37521995	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs183833190	chr17:37522016-37522017	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs529725345	chr17:37522080-37522081	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs547875903	chr17:37522109-37522110	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs372638809	chr17:37522114-37522115	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs537093602	chr17:37522135-37522136	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs188497063	chr17:37522164-37522165	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs570624082	chr17:37522190-37522191	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs12943885	chr17:37522209-37522210	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs181479190	chr17:37522236-37522237	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs574641428	chr17:37522244-37522245	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs186602823	chr17:37522248-37522249	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs35051623	chr17:37522250-37522251	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs575338320	chr17:37522251-37522252	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs571347988	chr17:37522278-37522279	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs376230031	chr17:37522282-37522283	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs376166736	chr17:37522305-37522306	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs564356659	chr17:37522312-37522313	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs141295906	chr17:37522313-37522314	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs376939318	chr17:37522391-37522392	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs562454618	chr17:37522402-37522403	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs144742035	chr17:37522492-37522493	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs548169481	chr17:37522498-37522499	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs563243633	chr17:37522523-37522524	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs530637086	chr17:37522568-37522569	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs11655703	chr17:37522638-37522639	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs552333714	chr17:37522700-37522701	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs371391101	chr17:37522710-37522711	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs570540410	chr17:37522741-37522742	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs534860537	chr17:37522813-37522814	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs546468887	chr17:37522892-37522893	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs568353426	chr17:37522896-37522897	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs535343367	chr17:37522968-37522969	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs191746224	chr17:37522977-37522978	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs546646402	chr17:37522994-37522995	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs538651432	chr17:37523001-37523002	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs181896498	chr17:37523037-37523038	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs375832202	chr17:37523039-37523040	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs138210877	chr17:37523092-37523093	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs531717996	chr17:37523098-37523099	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs34067496	chr17:37523136-37523137	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs539433898	chr17:37523142-37523143	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs113711694	chr17:37523150-37523151	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs398041667	chr17:37523151-37523152	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Ewing''s sarcoma	21437220	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Melanoma	18172304	CNVD
Moyamoya disease	22323933	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell lymphomas	19863542	CNVD
Cancer	16751803	CNVD
Chordoma	21602918	CNVD
Neurofibromatosis	20686819	CNVD
Peripheral nerve sheath tumors	20686819	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	17897457	CNVD
Neuroblastoma	17327916	CNVD
Breast cancer	21264507	CNVD
Endometrial cancer	22040021	CNVD
Neuroblastoma	21484798	CNVD
Breast cancer	22028636	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute myeloid leukemia	20724749	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17157792	CNVD
Bladder cancer	19088036	CNVD
Gastric cancer	17167181	CNVD
Breast cancer	19287154	CNVD
Leukemia	20874852	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Neuroblastoma	18664255	CNVD
Neuroblastoma	17533364	CNVD
Human rectal carcinomas	16397240	CNVD
Meningioma	19431122	CNVD
Neurocytoma	17123091	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	24379144	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Gastric cancer	18160780	CNVD
Hepatocellular carcinoma	16785998	CNVD
Breast cancer	17850661	CNVD
Primary lung adenocarcinoma	16799635	CNVD
HIV/AIDS	18848619	CNVD
Rheumatoid arthritis	19220326	CNVD
Rheumatoid arthritis	18848619	CNVD
Systemic lupus erythematosus	19220326	CNVD
Systemic lupus erythematosus	18848619	CNVD
Type 1 diabetes	19220326	CNVD
HIV/AIDS	17330138	CNVD
Basal cell lymphoma	17053054	CNVD
Autism	19955444	CNVD
Schizophrenia	19955444	CNVD
Acute monocytic leukemia	16498392	CNVD
Breast cancer	20409316	CNVD
Myelodysplastic syndrome	18663149	CNVD
Breast cancer	17457667	CNVD
Breast cancer	16951389	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16620391	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22048815	CNVD
Breast cancer	17603634	CNVD
Follicular lymphoma	20505157	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	20953835	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Sezary syndrome	18413736	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:7506 , 50 per page) page: 1 2 3 4 5 6 7 ... 151

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:37461400-37522000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:37463800-37528200	Weak transcription	HSMMtube	muscle
3	chr17:37489000-37522200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr17:37492400-37522400	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr17:37496400-37534000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr17:37496800-37522000	Weak transcription	Fetal Stomach	stomach
7	chr17:37498200-37534200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr17:37498400-37522800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr17:37498600-37525200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
10	chr17:37498600-37529600	Weak transcription	Primary T cells from cord blood	blood
11	chr17:37498600-37532600	Weak transcription	Primary B cells from peripheral blood	blood
12	chr17:37498600-37541200	Weak transcription	Fetal Thymus	thymus
13	chr17:37498600-37543800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr17:37498600-37544000	Weak transcription	Fetal Muscle Trunk	muscle
15	chr17:37498800-37556400	Weak transcription	Thymus	Thymus
16	chr17:37499200-37544000	Weak transcription	Primary T helper cells fromperipheralblood	blood
17	chr17:37509000-37543000	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr17:37509600-37522000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr17:37509600-37522000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr17:37512200-37522600	Weak transcription	Gastric	stomach
21	chr17:37514800-37556200	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr17:37515000-37525800	Weak transcription	Fetal Intestine Small	intestine
23	chr17:37515400-37555600	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr17:37515600-37543200	Weak transcription	Fetal Intestine Large	intestine
25	chr17:37517400-37526000	Weak transcription	Spleen	Spleen
26	chr17:37517600-37522000	Weak transcription	Brain Angular Gyrus	brain
27	chr17:37517600-37522000	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr17:37517600-37522400	Weak transcription	Right Ventricle	heart
29	chr17:37517600-37535600	Weak transcription	Psoas Muscle	Psoas
30	chr17:37517600-37536400	Weak transcription	Brain Anterior Caudate	brain
31	chr17:37517600-37555200	Weak transcription	Brain Germinal Matrix	brain
32	chr17:37517600-37556600	Weak transcription	Fetal Muscle Leg	muscle
33	chr17:37517800-37522000	Weak transcription	Brain Hippocampus Middle	brain
34	chr17:37518000-37554800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr17:37519600-37522800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
36	chr17:37519800-37522800	Enhancers	Adipose Nuclei	Adipose
37	chr17:37520400-37522000	Enhancers	Primary monocytes fromperipheralblood	blood
38	chr17:37520600-37523000	Enhancers	Colon Smooth Muscle	Colon
39	chr17:37520800-37522000	Enhancers	NH-A	brain
40	chr17:37520800-37522800	Enhancers	Rectal Smooth Muscle	rectum
41	chr17:37521000-37522000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr17:37521000-37522200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr17:37521000-37522400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr17:37521000-37541400	Weak transcription	Right Atrium	heart
45	chr17:37521200-37522000	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr17:37521200-37522000	Weak transcription	HSMM	muscle
47	chr17:37521200-37522000	Active TSS	NHDF-Ad	bronchial
48	chr17:37521200-37522600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr17:37521200-37522800	Enhancers	Primary neutrophils fromperipheralblood	blood
50	chr17:37521200-37532600	Weak transcription	Left Ventricle	heart

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