Variant report
Variant | nsv538866 |
---|---|
Chromosome Location | chr7:57212585-57626147 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2393)
- CpG islands (count:3907)
- Chromatin interactive region (count:7)
- LncRNA region (count:20)
- Mature miRNA region (count: 1)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr7:57226466-57226562 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr7:57546960-57548189 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr7:57550803-57551994 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr7:57552724-57553938 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr7:57548425-57550383 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr7:57554223-57556794 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr7:57226381-57226494 | K562 | blood: | n/a | n/a |
8 | ATF3 | chr7:57271267-57271470 | K562 | blood: | n/a | chr7:57271386-57271395 chr7:57271375-57271395 chr7:57271386-57271406 |
9 | BACH1 | chr7:57625009-57625034 | K562 | blood: | n/a | n/a |
10 | BATF | chr7:57545790-57546910 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr7:57293110-57293401 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr7:57552183-57552578 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr7:57548257-57549044 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr7:57553916-57556855 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr7:57549116-57552970 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr7:57547035-57548246 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr7:57553126-57556857 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr7:57547790-57548011 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr7:57549076-57550252 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr7:57550726-57552066 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr7:57253983-57254242 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr7:57553052-57553898 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr7:57547042-57547780 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr7:57548259-57549044 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr7:57546005-57546877 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr7:57254005-57254200 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr7:57553062-57553605 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr7:57547010-57549053 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr7:57545764-57546870 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr7:57553121-57556880 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr7:57548279-57549036 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr7:57555535-57556368 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr7:57549098-57552979 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr7:57389048-57389222 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr7:57554387-57555521 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr7:57552020-57552901 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr7:57254013-57254149 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr7:57253993-57254172 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr7:57547371-57548176 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr7:57546010-57546817 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr7:57551053-57551755 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr7:57553923-57554297 | GM12878 | blood: | n/a | n/a |
43 | BCL3 | chr7:57608761-57609009 | K562 | blood: | n/a | n/a |
44 | BHLHE40 | chr7:57546052-57546750 | HepG2 | liver: | n/a | n/a |
45 | BHLHE40 | chr7:57255135-57255352 | HepG2 | liver: | n/a | n/a |
46 | BHLHE40 | chr7:57547707-57548244 | HepG2 | liver: | n/a | n/a |
47 | BHLHE40 | chr7:57271222-57271447 | K562 | blood: | n/a | chr7:57271386-57271395 chr7:57271384-57271397 chr7:57271386-57271395 chr7:57271385-57271394 chr7:57271380-57271401 |
48 | BHLHE40 | chr7:57552609-57554096 | K562 | blood: | n/a | n/a |
49 | BHLHE40 | chr7:57549746-57550059 | HepG2 | liver: | n/a | n/a |
50 | BHLHE40 | chr7:57551998-57552902 | HepG2 | liver: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:57484153-57484203 | AG09319 | gingival: | n/a |
2 | chr7:57484153-57484203 | HIPEpiC | eye: | n/a |
3 | chr7:57472367-57472417 | HIPEpiC | eye: | n/a |
4 | chr7:57484153-57484203 | AG09319 | gingival: | n/a |
5 | chr7:57484153-57484203 | HIPEpiC | eye: | n/a |
6 | chr7:57472367-57472417 | HIPEpiC | eye: | n/a |
7 | chr7:57323862-57323912 | HPAEpiC | pulmonary alveolar: | n/a |
8 | chr7:57249065-57249115 | ECC-1 | luminal epithelium: | n/a |
9 | chr7:57249065-57249115 | AG09319 | gingival: | n/a |
10 | chr7:57247707-57247757 | MCF-7 | breast: | n/a |
11 | chr7:57247957-57248007 | K562 | blood: | n/a |
12 | chr7:57509438-57509488 | NHDF-neo | bronchial: | n/a |
13 | chr7:57252146-57252196 | HCT-116 | colon: | n/a |
14 | chr7:57245575-57245625 | HIPEpiC | eye: | n/a |
15 | chr7:57484272-57484322 | IMR90 | lung: | fetal |
16 | chr7:57532098-57532148 | PFSK-1 | brain: | n/a |
17 | chr7:57247912-57247962 | GM06990 | blood: | n/a |
18 | chr7:57248455-57248505 | HNPCEpiC | eye: | n/a |
19 | chr7:57472367-57472417 | HepG2 | liver: | n/a |
20 | chr7:57247891-57247941 | GM12892 | blood: | n/a |
21 | chr7:57252146-57252196 | HEK293 | kidney: | embryo |
22 | chr7:57247873-57247923 | NT2-D1 | testis: | n/a |
23 | chr7:57509266-57509316 | NB4 | blood: | n/a |
24 | chr7:57269554-57269604 | SK-N-SH_RA | brain: | n/a |
25 | chr7:57247871-57247921 | PANC-1 | pancreas: | n/a |
26 | chr7:57247871-57247921 | AG09319 | gingival: | n/a |
27 | chr7:57247912-57247962 | Hela-S3 | cervix: | n/a |
28 | chr7:57509266-57509316 | GM06990 | blood: | n/a |
29 | chr7:57271379-57271429 | HPAEpiC | pulmonary alveolar: | n/a |
30 | chr7:57475905-57475955 | Caco-2 | colon: | n/a |
31 | chr7:57218214-57218264 | BJ | skin: | n/a |
32 | chr7:57481019-57481069 | SAEC | small airway: | n/a |
33 | chr7:57324417-57324467 | BE2_C | brain: | n/a |
34 | chr7:57324924-57324974 | HCPEpiC | choroid plexus: | n/a |
35 | chr7:57484635-57484685 | T-47D | breast: | n/a |
36 | chr7:57509762-57509812 | HCM | heart: | n/a |
37 | chr7:57247748-57247798 | MCF-7 | breast: | n/a |
38 | chr7:57481019-57481069 | AoSMC | blood vessel: | n/a |
39 | chr7:57509933-57509983 | Hepatocyte | liver: | n/a |
40 | chr7:57512798-57512848 | GM12891 | blood: | n/a |
41 | chr7:57271836-57271886 | MCF10A-Er-Src | breast: | n/a |
42 | chr7:57247978-57248028 | NB4 | blood: | n/a |
43 | chr7:57472222-57472272 | HPAEpiC | pulmonary alveolar: | n/a |
44 | chr7:57247873-57247923 | GM12891 | blood: | n/a |
45 | chr7:57485543-57485593 | GM12892 | blood: | n/a |
46 | chr7:57271836-57271886 | LNCaP | prostate: | n/a |
47 | chr7:57481019-57481069 | GM12878 | blood: | n/a |
48 | chr7:57247176-57247226 | AG04450 | lung: | fetal |
49 | chr7:57324606-57324656 | PFSK-1 | brain: | n/a |
50 | chr7:57247957-57248007 | IMR90 | lung: | fetal |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr20:26131190..26134756-chr7:57619861..57622623,3 | K562 | blood: | |
2 | chr4:33836938..33837728-chr7:57607899..57608399,2 | K562 | blood: | |
3 | chr20:26130778..26134198-chr7:57619861..57623955,5 | K562 | blood: | |
4 | chr7:57542573..57543492-chr9:116540561..116541492,2 | MCF-7 | breast: | |
5 | chr20:49003199..49005362-chr7:57423711..57425216,2 | MCF-7 | breast: | |
6 | chr12:63323361..63325446-chr7:57547979..57549481,2 | MCF-7 | breast: | |
7 | chr20:47131270..47131959-chr7:57284082..57284602,2 | MCF-7 | breast: |
(count:20 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ZNF716-22 | chr7:57216056-57216137 | NONHSAT120810 |
2 | lnc-ZNF716-10 | chr7:57285590-57285595 | FPKM1_group_29782_transcript_2 |
3 | lnc-ZNF716-10 | chr7:57285590-57285649 | NONHSAT120825 |
4 | lnc-ZNF716-10 | chr7:57284552-57284791 | FPKM1_group_29782_transcript_2 |
5 | lnc-ZNF479-1 | chr7:57289731-57289866 | ENSG00000234089 |
6 | lnc-ZNF716-10 | chr7:57285335-57285589 | NONHSAT120826 |
7 | lnc-ZNF716-22 | chr7:57221319-57221466 | NONHSAT120809 |
8 | lnc-ZNF716-10 | chr7:57284552-57284791 | NONHSAT120825 |
9 | lnc-ZNF716-22 | chr7:57221319-57221466 | NONHSAT120808 |
10 | lnc-ZNF716-1 | chr7:57552078-57552164 | NONHSAT120842 |
11 | lnc-ZNF716-1 | chr7:57553368-57553399 | NONHSAT120842 |
12 | lnc-ZNF716-3 | chr7:57474787-57474876 | NONHSAT120831 |
13 | lnc-ZNF479-1 | chr7:57277572-57277842 | ENSG00000234089 |
14 | lnc-ZNF716-3 | chr7:57478340-57478471 | NONHSAT120831 |
15 | lnc-ZNF716-1 | chr7:57555801-57555836 | NONHSAT120842 |
16 | lnc-ZNF716-3 | chr7:57475982-57476107 | NONHSAT120831 |
17 | lnc-ZNF716-1 | chr7:57549917-57549965 | NONHSAT120842 |
18 | lnc-ZNF716-1 | chr7:57551421-57551428 | NONHSAT120842 |
19 | lnc-ZNF716-1 | chr7:57553153-57553292 | NONHSAT120842 |
20 | lnc-ZNF716-10 | chr7:57285833-57285918 | NONHSAT120826 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-3147 | chr7:57472736-57472759 | MIMAT0015019 |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000235368 | TF binding region |
GUSBP10 | TF binding region |
GUSBP12 | TF binding region |
VN1R28P | TF binding region |
ENSG00000235095 | TF binding region |
MIR3147 | TF binding region |
ENSG00000231537 | TF binding region |
ENSG00000234089 | TF binding region |
MTND1P4 | TF binding region |
ENSG00000224880 | TF binding region |
ENSG00000228851 | TF binding region |
ENSG00000236692 | TF binding region |
ENSG00000234671 | TF binding region |
ENSG00000270957 | TF binding region |
MTND5P7 | TF binding region |
RNU7-157P | TF binding region |
MTND5P6 | TF binding region |
MTND2P6 | TF binding region |
ZNF716 | TF binding region |
MTND4P5 | TF binding region |
MTND4P4 | TF binding region |
ENSG00000235368 | CpG island |
GUSBP10 | CpG island |
GUSBP12 | CpG island |
VN1R28P | CpG island |
ENSG00000235095 | CpG island |
MIR3147 | CpG island |
ENSG00000231537 | CpG island |
ENSG00000234089 | CpG island |
MTND1P4 | CpG island |
ENSG00000224880 | CpG island |
ENSG00000228851 | CpG island |
ENSG00000236692 | CpG island |
ENSG00000234671 | CpG island |
ENSG00000270957 | CpG island |
MTND5P7 | CpG island |
RNU7-157P | CpG island |
MTND5P6 | CpG island |
MTND2P6 | CpG island |
ZNF716 | CpG island |
MTND4P5 | CpG island |
MTND4P4 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs564028510 | chr7:57216057-57216058 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs188514210 | chr7:57216065-57216066 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
3 | rs549634289 | chr7:57216089-57216090 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
4 | rs560589349 | chr7:57216092-57216093 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs528071549 | chr7:57216128-57216129 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
6 | rs538977417 | chr7:57217226-57217227 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs557184370 | chr7:57217242-57217243 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs569300492 | chr7:57217248-57217249 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs10245203 | chr7:57217249-57217250 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
10 | rs554776797 | chr7:57217286-57217287 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs149933807 | chr7:57217354-57217355 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs146562766 | chr7:57217362-57217363 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs559157141 | chr7:57217363-57217364 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs541341954 | chr7:57217376-57217377 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs7800246 | chr7:57218103-57218104 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
16 | rs545948507 | chr7:57218108-57218109 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs564245324 | chr7:57218109-57218110 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs117966271 | chr7:57218112-57218113 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs7811722 | chr7:57218114-57218115 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
20 | rs13238865 | chr7:57218122-57218123 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
21 | rs13228137 | chr7:57218127-57218128 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
22 | rs371617359 | chr7:57218132-57218133 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs548285342 | chr7:57218143-57218144 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs7811740 | chr7:57218153-57218154 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs534143239 | chr7:57218155-57218156 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs112813993 | chr7:57218162-57218163 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs552763362 | chr7:57218168-57218169 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs570937939 | chr7:57218176-57218177 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs538574304 | chr7:57218203-57218204 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs556578245 | chr7:57218204-57218205 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs574491036 | chr7:57218242-57218243 | Inactive region | TF binding regionCpG island | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs34551579 | chr7:57221433-57221434 | Inactive region | lncRNA | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
33 | rs550616627 | chr7:57221464-57221465 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs141058649 | chr7:57228800-57228801 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs149897375 | chr7:57228843-57228844 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs554338848 | chr7:57228845-57228846 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs34585021 | chr7:57228857-57228858 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs571517990 | chr7:57228864-57228865 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs113062222 | chr7:57228883-57228884 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs78086584 | chr7:57228891-57228892 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs560227840 | chr7:57228894-57228895 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs188259571 | chr7:57228950-57228951 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs557254466 | chr7:57228960-57228961 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs9886282 | chr7:57228980-57228981 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
45 | rs144953649 | chr7:57229024-57229025 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
46 | rs140755488 | chr7:57229038-57229039 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
47 | rs572749176 | chr7:57229048-57229049 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
48 | rs144605092 | chr7:57229058-57229059 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
49 | rs564937848 | chr7:57229083-57229084 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
50 | rs577131364 | chr7:57229106-57229107 | ZNF genes & repeats Active TSS | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Neuroblastoma | 18923191 | CNVD |
Wilms tumour | 21544195 | CNVD |
Glioma | 21971842 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Liposarcoma | 21253554 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Oral cancer | 21386901 | CNVD |
colon cancer | 17210682 | CNVD |
Lung adenocarcinoma | 21810691 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Hypothalamic hamartomas | 18252217 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Peripheral t-cell lymphoma | 19118030 | CNVD |
Medulloblastoma | 18056178 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Seminomas | 18059402 | CNVD |
Testicular cancer | 18059402 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Autism | 19415332 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Malaria | 21533027 | CNVD |
Melanoma | 18172304 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
head and neck squamous cell carcinoma | 19289630 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Autism | 22495311 | CNVD |
Biliary cancer | 19435499 | CNVD |
Cancer | 21183584 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Williams-beuren syndrome | 22470819 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Glioblastoma multiforme | 21750150 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Gastric cancer | 24379144 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Lung cancer | 18438408 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Breast cancer | 21364760 | CNVD |
Esophageal cancer | 21851588 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Lissencephaly | 21572526 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 16397240 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Glioblastoma multiforme | 22291905 | CNVD |
Glioblastoma multiforme | 19435819 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Lung cancer | 21911935 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Breast cancer | 21990379 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Lung cancer | 17925434 | CNVD |
Glioma | 24330732 | CNVD |
Lung adenocarcinoma | 23938291 | CNVD |
Glioma | 17634744 | CNVD |
Oral squamous cell carcinoma | 19276369 | CNVD |
Ovine squamous-cell carcinoma | 17599052 | CNVD |
Lung cancer | 20031968 | CNVD |
Glioblastoma | 17090523 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Glioma | 17123091 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Williams Syndrome | 20824207 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Schizophrenia | 21399695 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:57217200-57217400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
2 | chr7:57228800-57239000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
3 | chr7:57229000-57229800 | Active TSS | Fetal Heart | heart |
4 | chr7:57229000-57230000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
5 | chr7:57229400-57229800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
6 | chr7:57231200-57236000 | ZNF genes & repeats | Liver | Liver |
7 | chr7:57231400-57232200 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
8 | chr7:57232000-57233800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
9 | chr7:57232000-57234200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr7:57234200-57238200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
11 | chr7:57237800-57239800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
12 | chr7:57239200-57239600 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
13 | chr7:57241800-57243800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
14 | chr7:57242600-57243800 | ZNF genes & repeats | Brain Substantia Nigra | brain |
15 | chr7:57242800-57243600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
16 | chr7:57244200-57250800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
17 | chr7:57244600-57246800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
18 | chr7:57244600-57250800 | ZNF genes & repeats | Adipose Nuclei | Adipose |
19 | chr7:57244800-57245200 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
20 | chr7:57245000-57245200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr7:57247400-57248200 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
22 | chr7:57249600-57250400 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
23 | chr7:57249800-57250800 | ZNF genes & repeats | Pancreas | Pancrea |
24 | chr7:57254000-57254800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
25 | chr7:57254400-57254600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
26 | chr7:57262200-57262800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
27 | chr7:57267400-57274400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
28 | chr7:57267600-57268800 | Weak transcription | Stomach Smooth Muscle | stomach |
29 | chr7:57268000-57272600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
30 | chr7:57268200-57270000 | ZNF genes & repeats | Liver | Liver |
31 | chr7:57268400-57272400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
32 | chr7:57268600-57269000 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
33 | chr7:57268600-57269600 | ZNF genes & repeats | Gastric | stomach |
34 | chr7:57268800-57270200 | ZNF genes & repeats | Skeletal Muscle Male | skeletal muscle |
35 | chr7:57269000-57269200 | ZNF genes & repeats | Fetal Brain Female | brain |
36 | chr7:57269200-57269400 | ZNF genes & repeats | Pancreas | Pancrea |
37 | chr7:57269400-57274000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
38 | chr7:57269800-57270200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
39 | chr7:57270800-57271400 | Active TSS | Brain Angular Gyrus | brain |
40 | chr7:57270800-57271600 | ZNF genes & repeats | Spleen | Spleen |
41 | chr7:57270800-57272000 | Active TSS | Brain Substantia Nigra | brain |
42 | chr7:57271000-57271200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
43 | chr7:57271000-57271200 | Active TSS | Brain Anterior Caudate | brain |
44 | chr7:57271000-57272000 | Active TSS | Brain Hippocampus Middle | brain |
45 | chr7:57271200-57271800 | ZNF genes & repeats | Brain Anterior Caudate | brain |
46 | chr7:57271200-57271800 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
47 | chr7:57272000-57272200 | Flanking Active TSS | Brain Substantia Nigra | brain |
48 | chr7:57274600-57275000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
49 | chr7:57278800-57279800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
50 | chr7:57283400-57285600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |