Variant report
Variant | nsv538871 |
---|---|
Chromosome Location | chr7:57253403-57886151 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2890)
- CpG islands (count:5190)
- Chromatin interactive region (count:8)
- LncRNA region (count:35)
- Mature miRNA region (count: 1)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr7:57698544-57698607 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr7:57552724-57553938 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr7:57548425-57550383 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr7:57554223-57556794 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr7:57546960-57548189 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr7:57550803-57551994 | K562 | blood: | n/a | n/a |
7 | ATF3 | chr7:57271267-57271470 | K562 | blood: | n/a | chr7:57271386-57271395 chr7:57271375-57271395 chr7:57271386-57271406 |
8 | BACH1 | chr7:57708717-57708917 | K562 | blood: | n/a | n/a |
9 | BACH1 | chr7:57625009-57625034 | K562 | blood: | n/a | n/a |
10 | BATF | chr7:57548257-57549044 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr7:57293110-57293401 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr7:57552183-57552578 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr7:57553052-57553898 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr7:57553126-57556857 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr7:57545790-57546910 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr7:57650647-57650907 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr7:57550726-57552066 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr7:57547790-57548011 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr7:57546005-57546877 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr7:57549076-57550252 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr7:57253983-57254242 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr7:57549116-57552970 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr7:57667657-57667934 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr7:57667672-57667890 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr7:57635362-57635498 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr7:57553916-57556855 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr7:57548259-57549044 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr7:57254005-57254200 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr7:57547035-57548246 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr7:57547042-57547780 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr7:57554387-57555521 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr7:57551053-57551755 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr7:57253993-57254172 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr7:57389048-57389222 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr7:57547010-57549053 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr7:57552020-57552901 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr7:57254013-57254149 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr7:57546010-57546817 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr7:57555535-57556368 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr7:57882040-57882219 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr7:57853868-57854123 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr7:57548279-57549036 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr7:57635305-57635594 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr7:57547371-57548176 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr7:57549098-57552979 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr7:57553062-57553605 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr7:57766889-57767133 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr7:57545764-57546870 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr7:57553923-57554297 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr7:57553121-57556880 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:57487091-57487141 | HRPEpiC | eye: | n/a |
2 | chr7:57472959-57473009 | H1-hESC | embryonic stem cell: | embryo |
3 | chr7:57486704-57486754 | MCF10A-Er-Src | breast: | n/a |
4 | chr7:57639360-57639410 | HEK293 | kidney: | embryo |
5 | chr7:57835813-57835863 | NT2-D1 | testis: | n/a |
6 | chr7:57487091-57487141 | HRPEpiC | eye: | n/a |
7 | chr7:57472959-57473009 | H1-hESC | embryonic stem cell: | embryo |
8 | chr7:57486704-57486754 | MCF10A-Er-Src | breast: | n/a |
9 | chr7:57639360-57639410 | HEK293 | kidney: | embryo |
10 | chr7:57835813-57835863 | NT2-D1 | testis: | n/a |
11 | chr7:57545330-57545380 | Hela-S3 | cervix: | n/a |
12 | chr7:57486704-57486754 | Jurkat | blood: | n/a |
13 | chr7:57484819-57484869 | ProgFib | skin: | n/a |
14 | chr7:57320460-57320510 | HRCEpiC | kidney: | n/a |
15 | chr7:57545330-57545380 | SK-N-SH | brain: | n/a |
16 | chr7:57509933-57509983 | CMK | blood: | n/a |
17 | chr7:57472504-57472554 | BJ | skin: | n/a |
18 | chr7:57484635-57484685 | GM12891 | blood: | n/a |
19 | chr7:57485543-57485593 | BJ | skin: | n/a |
20 | chr7:57324841-57324891 | MCF10A-Er-Src | breast: | n/a |
21 | chr7:57472709-57472759 | IMR90 | lung: | fetal |
22 | chr7:57324841-57324891 | GM12878 | blood: | n/a |
23 | chr7:57472959-57473009 | PANC-1 | pancreas: | n/a |
24 | chr7:57323862-57323912 | AoSMC | blood vessel: | n/a |
25 | chr7:57714285-57714335 | MCF-7 | breast: | n/a |
26 | chr7:57268776-57268826 | K562 | blood: | n/a |
27 | chr7:57273782-57273832 | T-47D | breast: | n/a |
28 | chr7:57485543-57485593 | AG10803 | skin: | n/a |
29 | chr7:57710252-57710302 | GM12891 | blood: | n/a |
30 | chr7:57639360-57639410 | HRPEpiC | eye: | n/a |
31 | chr7:57472709-57472759 | AG10803 | skin: | n/a |
32 | chr7:57711394-57711444 | HMEC | breast: | n/a |
33 | chr7:57273782-57273832 | HAEpiC | amniotic membrane: | n/a |
34 | chr7:57475905-57475955 | GM12891 | blood: | n/a |
35 | chr7:57836911-57836961 | K562 | blood: | n/a |
36 | chr7:57324841-57324891 | NHBE | bronchial: | n/a |
37 | chr7:57714270-57714320 | BJ | skin: | n/a |
38 | chr7:57881100-57881150 | AG09309 | skin: | n/a |
39 | chr7:57639360-57639410 | HUVEC | blood vessel: | n/a |
40 | chr7:57836911-57836961 | T-47D | breast: | n/a |
41 | chr7:57830625-57830675 | AG10803 | skin: | n/a |
42 | chr7:57712819-57712869 | HEK293 | kidney: | embryo |
43 | chr7:57711394-57711444 | IMR90 | lung: | fetal |
44 | chr7:57830625-57830675 | PANC-1 | pancreas: | n/a |
45 | chr7:57271021-57271071 | PrEC | prostate: | n/a |
46 | chr7:57715349-57715399 | RPTEC | kidney: | n/a |
47 | chr7:57268776-57268826 | AG04449 | skin: | fetal |
48 | chr7:57509762-57509812 | HNPCEpiC | eye: | n/a |
49 | chr7:57831919-57831969 | HIPEpiC | eye: | n/a |
50 | chr7:57481019-57481069 | NB4 | blood: | n/a |
(count:8 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr4:33836938..33837728-chr7:57607899..57608399,2 | K562 | blood: | |
2 | chr17:21513323..21515345-chr7:57633825..57635715,2 | K562 | blood: | |
3 | chr20:26131190..26134756-chr7:57619861..57622623,3 | K562 | blood: | |
4 | chr20:26130778..26134198-chr7:57619861..57623955,5 | K562 | blood: | |
5 | chr12:63323361..63325446-chr7:57547979..57549481,2 | MCF-7 | breast: | |
6 | chr7:57542573..57543492-chr9:116540561..116541492,2 | MCF-7 | breast: | |
7 | chr20:49003199..49005362-chr7:57423711..57425216,2 | MCF-7 | breast: | |
8 | chr20:47131270..47131959-chr7:57284082..57284602,2 | MCF-7 | breast: |
(count:35 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ZNF479-8 | chr7:57689759-57689983 | NONHSAT120847 |
2 | lnc-ZNF479-8 | chr7:57696818-57696916 | NONHSAT120847 |
3 | lnc-ZNF479-8 | chr7:57688668-57688812 | NONHSAT120848 |
4 | lnc-ZNF479-8 | chr7:57696817-57696916 | NONHSAT120850 |
5 | lnc-ZNF716-1 | chr7:57553368-57553399 | NONHSAT120842 |
6 | lnc-ZNF716-10 | chr7:57285590-57285649 | NONHSAT120825 |
7 | lnc-ZNF716-3 | chr7:57475982-57476107 | NONHSAT120831 |
8 | lnc-ZNF716-1 | chr7:57553153-57553292 | NONHSAT120842 |
9 | lnc-ZNF716-10 | chr7:57284552-57284791 | FPKM1_group_29782_transcript_2 |
10 | lnc-ZNF479-8 | chr7:57703364-57703554 | NONHSAT120850 |
11 | lnc-ZNF479-8 | chr7:57689787-57689961 | NONHSAT120850 |
12 | lnc-ZNF479-8 | chr7:57689759-57689961 | NONHSAT120848 |
13 | lnc-ZNF479-8 | chr7:57704747-57704895 | NONHSAT120850 |
14 | lnc-ZNF479-16 | chr7:57882150-57882506 | NONHSAT120880 |
15 | lnc-ZNF716-3 | chr7:57478340-57478471 | NONHSAT120831 |
16 | lnc-ZNF479-8 | chr7:57696817-57696917 | NONHSAT120848 |
17 | lnc-ZNF479-8 | chr7:57701610-57701660 | NONHSAT120847 |
18 | lnc-ZNF716-1 | chr7:57551421-57551428 | NONHSAT120842 |
19 | lnc-ZNF716-10 | chr7:57284552-57284791 | NONHSAT120825 |
20 | lnc-ZNF479-14 | chr7:57877307-57877718 | NONHSAT120873 |
21 | lnc-ZNF716-10 | chr7:57285833-57285918 | NONHSAT120826 |
22 | lnc-ZNF479-1 | chr7:57289731-57289866 | ENSG00000234089 |
23 | lnc-ZNF716-10 | chr7:57285590-57285595 | FPKM1_group_29782_transcript_2 |
24 | lnc-ZNF479-1 | chr7:57277572-57277842 | ENSG00000234089 |
25 | lnc-ZNF716-1 | chr7:57549917-57549965 | NONHSAT120842 |
26 | lnc-ZNF716-1 | chr7:57552078-57552164 | NONHSAT120842 |
27 | lnc-ZNF716-1 | chr7:57555801-57555836 | NONHSAT120842 |
28 | lnc-ZNF479-15 | chr7:57879738-57880116 | NONHSAT120878 |
29 | lnc-ZNF716-10 | chr7:57285335-57285589 | NONHSAT120826 |
30 | lnc-ZNF479-8 | chr7:57703900-57703975 | NONHSAT120850 |
31 | lnc-ZNF716-3 | chr7:57474787-57474876 | NONHSAT120831 |
32 | lnc-ZNF716-21 | chr7:57830672-57830879 | NONHSAT120869 |
33 | lnc-ZNF716-7 | chr7:57710227-57710560 | NONHSAT120861 |
34 | lnc-ZNF479-11 | chr7:57830325-57830652 | NONHSAT120868 |
35 | lnc-ZNF479-8 | chr7:57688185-57688268 | NONHSAT120847 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-3147 | chr7:57472736-57472759 | MIMAT0015019 |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000227015 | TF binding region |
ENSG00000224484 | TF binding region |
ENSG00000231484 | TF binding region |
ENSG00000235368 | TF binding region |
ENSG00000231232 | TF binding region |
ENSG00000237236 | TF binding region |
GUSBP12 | TF binding region |
VN1R28P | TF binding region |
ENSG00000237639 | TF binding region |
ENSG00000234085 | TF binding region |
MIR3147 | TF binding region |
ENSG00000234089 | TF binding region |
ENSG00000228851 | TF binding region |
ENSG00000270957 | TF binding region |
NCOR1P3 | TF binding region |
MTND4P5 | TF binding region |
ENSG00000229627 | TF binding region |
ENSG00000224653 | TF binding region |
ENSG00000230271 | TF binding region |
ENSG00000270749 | TF binding region |
ENSG00000233962 | TF binding region |
ENSG00000236907 | TF binding region |
ENSG00000232161 | TF binding region |
MTND1P4 | TF binding region |
ENSG00000250923 | TF binding region |
ENSG00000236692 | TF binding region |
ENSG00000234671 | TF binding region |
MTND5P7 | TF binding region |
RNU7-157P | TF binding region |
ENSG00000243981 | TF binding region |
ENSG00000236261 | TF binding region |
ENSG00000250618 | TF binding region |
MTND2P6 | TF binding region |
ZNF716 | TF binding region |
ENSG00000230796 | TF binding region |
ENSG00000223836 | TF binding region |
ENSG00000227015 | CpG island |
ENSG00000224484 | CpG island |
ENSG00000231484 | CpG island |
ENSG00000235368 | CpG island |
ENSG00000231232 | CpG island |
ENSG00000237236 | CpG island |
GUSBP12 | CpG island |
VN1R28P | CpG island |
ENSG00000237639 | CpG island |
ENSG00000234085 | CpG island |
MIR3147 | CpG island |
ENSG00000234089 | CpG island |
ENSG00000228851 | CpG island |
ENSG00000270957 | CpG island |
NCOR1P3 | CpG island |
MTND4P5 | CpG island |
ENSG00000229627 | CpG island |
ENSG00000224653 | CpG island |
ENSG00000230271 | CpG island |
ENSG00000270749 | CpG island |
ENSG00000233962 | CpG island |
ENSG00000236907 | CpG island |
ENSG00000232161 | CpG island |
MTND1P4 | CpG island |
ENSG00000250923 | CpG island |
ENSG00000236692 | CpG island |
ENSG00000234671 | CpG island |
MTND5P7 | CpG island |
RNU7-157P | CpG island |
ENSG00000243981 | CpG island |
ENSG00000236261 | CpG island |
ENSG00000250618 | CpG island |
MTND2P6 | CpG island |
ZNF716 | CpG island |
ENSG00000230796 | CpG island |
ENSG00000223836 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs557562311 | chr7:57253959-57253960 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
2 | rs575772411 | chr7:57253960-57253961 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
3 | rs111995979 | chr7:57254025-57254026 | ZNF genes & repeats | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
4 | rs555314258 | chr7:57254046-57254047 | ZNF genes & repeats | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
5 | rs368658678 | chr7:57254065-57254066 | ZNF genes & repeats | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
6 | rs79444885 | chr7:57254078-57254079 | ZNF genes & repeats | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
7 | rs139336180 | chr7:57254121-57254122 | ZNF genes & repeats | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
8 | rs564862990 | chr7:57254156-57254157 | ZNF genes & repeats | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
9 | rs569869756 | chr7:57254173-57254174 | ZNF genes & repeats | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
10 | rs184968965 | chr7:57254187-57254188 | ZNF genes & repeats | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
11 | rs144264343 | chr7:57254205-57254206 | ZNF genes & repeats | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
12 | rs116066478 | chr7:57254249-57254250 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs530588073 | chr7:57254268-57254269 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs548324873 | chr7:57254272-57254273 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs566476405 | chr7:57254317-57254318 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs531077184 | chr7:57254348-57254349 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs527572133 | chr7:57254355-57254356 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs190177415 | chr7:57254387-57254388 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs551303825 | chr7:57254437-57254438 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs571286315 | chr7:57254440-57254441 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs538997666 | chr7:57254443-57254444 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs370198475 | chr7:57254447-57254448 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs569296506 | chr7:57254499-57254500 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs76140698 | chr7:57254500-57254501 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs146581320 | chr7:57254579-57254580 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs56953870 | chr7:57254613-57254614 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
27 | rs540910538 | chr7:57254623-57254624 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs28439086 | chr7:57254640-57254641 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
29 | rs4870630 | chr7:57254647-57254648 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
30 | rs140002093 | chr7:57254666-57254667 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs562452944 | chr7:57254697-57254698 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs193204794 | chr7:57255142-57255143 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs546715197 | chr7:57255215-57255216 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs567046520 | chr7:57255282-57255283 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
35 | rs534362144 | chr7:57255308-57255309 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
36 | rs565472502 | chr7:57255312-57255313 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
37 | rs13227085 | chr7:57255375-57255376 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
38 | rs13245558 | chr7:57255380-57255381 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
39 | rs559306554 | chr7:57255384-57255385 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
40 | rs558753524 | chr7:57255396-57255397 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
41 | rs376882173 | chr7:57255397-57255398 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs201614368 | chr7:57255401-57255402 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
43 | rs554621767 | chr7:57255409-57255410 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
44 | rs574549631 | chr7:57255420-57255421 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
45 | rs13227190 | chr7:57255423-57255424 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
46 | rs13234984 | chr7:57255425-57255426 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
47 | rs537444971 | chr7:57255429-57255430 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
48 | rs532637048 | chr7:57255486-57255487 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
49 | rs199774495 | chr7:57255498-57255499 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
50 | rs536811372 | chr7:57255566-57255567 | Inactive region | TF binding region | 3 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Neuroblastoma | 18923191 | CNVD |
Wilms tumour | 21544195 | CNVD |
Glioma | 21971842 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Liposarcoma | 21253554 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Oral cancer | 21386901 | CNVD |
colon cancer | 17210682 | CNVD |
Lung adenocarcinoma | 21810691 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Hypothalamic hamartomas | 18252217 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Peripheral t-cell lymphoma | 19118030 | CNVD |
Medulloblastoma | 18056178 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Seminomas | 18059402 | CNVD |
Testicular cancer | 18059402 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Autism | 19415332 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Malaria | 21533027 | CNVD |
Melanoma | 18172304 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
head and neck squamous cell carcinoma | 19289630 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Autism | 22495311 | CNVD |
Biliary cancer | 19435499 | CNVD |
Cancer | 21183584 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Williams-beuren syndrome | 22470819 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Glioblastoma multiforme | 21750150 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Gastric cancer | 24379144 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Lung cancer | 18438408 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Breast cancer | 21364760 | CNVD |
Esophageal cancer | 21851588 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Lissencephaly | 21572526 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 16397240 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Glioblastoma multiforme | 22291905 | CNVD |
Glioblastoma multiforme | 19435819 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Lung cancer | 21911935 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Breast cancer | 21990379 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Lung cancer | 17925434 | CNVD |
Glioma | 24330732 | CNVD |
Lung adenocarcinoma | 23938291 | CNVD |
Glioma | 17634744 | CNVD |
Oral squamous cell carcinoma | 19276369 | CNVD |
Ovine squamous-cell carcinoma | 17599052 | CNVD |
Lung cancer | 20031968 | CNVD |
Glioblastoma | 17090523 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Glioma | 17123091 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Williams Syndrome | 20824207 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Schizophrenia | 21399695 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:57254000-57254800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
2 | chr7:57254400-57254600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
3 | chr7:57262200-57262800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
4 | chr7:57267400-57274400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
5 | chr7:57267600-57268800 | Weak transcription | Stomach Smooth Muscle | stomach |
6 | chr7:57268000-57272600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
7 | chr7:57268200-57270000 | ZNF genes & repeats | Liver | Liver |
8 | chr7:57268400-57272400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
9 | chr7:57268600-57269000 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
10 | chr7:57268600-57269600 | ZNF genes & repeats | Gastric | stomach |
11 | chr7:57268800-57270200 | ZNF genes & repeats | Skeletal Muscle Male | skeletal muscle |
12 | chr7:57269000-57269200 | ZNF genes & repeats | Fetal Brain Female | brain |
13 | chr7:57269200-57269400 | ZNF genes & repeats | Pancreas | Pancrea |
14 | chr7:57269400-57274000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
15 | chr7:57269800-57270200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
16 | chr7:57270800-57271400 | Active TSS | Brain Angular Gyrus | brain |
17 | chr7:57270800-57271600 | ZNF genes & repeats | Spleen | Spleen |
18 | chr7:57270800-57272000 | Active TSS | Brain Substantia Nigra | brain |
19 | chr7:57271000-57271200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
20 | chr7:57271000-57271200 | Active TSS | Brain Anterior Caudate | brain |
21 | chr7:57271000-57272000 | Active TSS | Brain Hippocampus Middle | brain |
22 | chr7:57271200-57271800 | ZNF genes & repeats | Brain Anterior Caudate | brain |
23 | chr7:57271200-57271800 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
24 | chr7:57272000-57272200 | Flanking Active TSS | Brain Substantia Nigra | brain |
25 | chr7:57274600-57275000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
26 | chr7:57278800-57279800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
27 | chr7:57283400-57285600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
28 | chr7:57284200-57284600 | ZNF genes & repeats | HepG2 | liver |
29 | chr7:57284600-57286200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
30 | chr7:57284800-57285200 | ZNF genes & repeats | HepG2 | liver |
31 | chr7:57286200-57286800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
32 | chr7:57294200-57294400 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
33 | chr7:57295200-57296800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
34 | chr7:57306400-57306800 | ZNF genes & repeats | Fetal Kidney | kidney |
35 | chr7:57306600-57306800 | ZNF genes & repeats | Pancreas | Pancrea |
36 | chr7:57310200-57313400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
37 | chr7:57314200-57315000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
38 | chr7:57317800-57320000 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
39 | chr7:57318200-57318600 | Active TSS | Fetal Heart | heart |
40 | chr7:57323800-57325000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
41 | chr7:57328000-57330600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
42 | chr7:57336000-57337600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
43 | chr7:57341400-57343800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
44 | chr7:57342000-57343200 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
45 | chr7:57345000-57345600 | ZNF genes & repeats | Liver | Liver |
46 | chr7:57347400-57349600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
47 | chr7:57348400-57349400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
48 | chr7:57353400-57354400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
49 | chr7:57374800-57379800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
50 | chr7:57379600-57380200 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |