Variant report

Variant nsv555097
Chromosome Location chr11:56084611-56235061
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:56094400-56094600 ZNF genes & repeats H1 Cell Line embryonic stem cell
2 chr11:56094600-56095800 Weak transcription H1 Cell Line embryonic stem cell
3 chr11:56097200-56104800 Weak transcription H1 Cell Line embryonic stem cell
4 chr11:56099400-56099800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
5 chr11:56100800-56101200 Active TSS Brain Hippocampus Middle brain
6 chr11:56101000-56101400 Enhancers Brain Cingulate Gyrus brain
7 chr11:56104400-56105400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
8 chr11:56104600-56105200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr11:56104800-56105200 Enhancers H1 Cell Line embryonic stem cell
10 chr11:56104800-56105400 Enhancers HUES48 Cell Line embryonic stem cell
11 chr11:56105000-56105200 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr11:56105000-56105200 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr11:56105000-56105400 Active TSS ES-WA7 Cell Line embryonic stem cell
14 chr11:56105200-56105400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
15 chr11:56105200-56105400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
16 chr11:56105200-56105600 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr11:56105400-56105600 Active TSS ES-I3 Cell Line embryonic stem cell
18 chr11:56105400-56105600 Active TSS iPS-20b Cell Line embryonic stem cell
19 chr11:56111800-56112400 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr11:56111800-56112600 Enhancers HUES48 Cell Line embryonic stem cell
21 chr11:56112000-56112400 Enhancers HUES6 Cell Line embryonic stem cell
22 chr11:56112200-56112800 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr11:56124600-56125200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr11:56143200-56143800 Active TSS Brain Substantia Nigra brain
25 chr11:56156200-56157000 Enhancers Pancreatic Islets Pancreatic Islet
26 chr11:56161200-56162800 Enhancers Fetal Intestine Small intestine
27 chr11:56161200-56163000 Enhancers Fetal Intestine Large intestine
28 chr11:56163600-56164000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr11:56169600-56170000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
30 chr11:56171000-56172400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr11:56171600-56172400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr11:56173600-56173800 Enhancers Pancreatic Islets Pancreatic Islet
33 chr11:56173800-56175400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr11:56200400-56200800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr11:56210000-56210800 Enhancers Fetal Intestine Large intestine
36 chr11:56210800-56211000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr11:56210800-56211200 Weak transcription Fetal Intestine Large intestine
38 chr11:56211200-56211600 Enhancers Fetal Intestine Large intestine
39 chr11:56220800-56221800 Enhancers Fetal Brain Male brain
40 chr11:56222400-56222800 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr11:56223400-56224200 Enhancers HUES48 Cell Line embryonic stem cell

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