Variant report

Variant nsv558589
Chromosome Location chr12:39667861-39768356
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:983 , 50 per page) page: 1 2 3 4 5 6 7 ... 20
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:39669400-39670000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr12:39674800-39690200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:39681200-39682000 Enhancers Hela-S3 cervix
4 chr12:39681400-39681600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr12:39681400-39682200 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr12:39681600-39687600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:39682000-39699200 Weak transcription Hela-S3 cervix
8 chr12:39682400-39688800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:39683200-39696000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr12:39683400-39685600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr12:39683400-39686000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr12:39684400-39695400 Weak transcription A549 lung
13 chr12:39684600-39688000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr12:39684600-39688200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr12:39685200-39697400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr12:39685200-39714400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr12:39685600-39688800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr12:39686000-39688200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr12:39686200-39686600 Enhancers Brain Germinal Matrix brain
20 chr12:39686400-39686600 Enhancers Fetal Brain Male brain
21 chr12:39686400-39699600 Weak transcription HMEC breast
22 chr12:39686600-39686800 Enhancers Pancreas Pancrea
23 chr12:39686600-39688000 Weak transcription Brain Germinal Matrix brain
24 chr12:39686600-39688400 Weak transcription Fetal Brain Male brain
25 chr12:39686600-39722400 Weak transcription GM12878-XiMat blood
26 chr12:39686600-39725400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:39686800-39729800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr12:39686800-39738800 Weak transcription Pancreas Pancrea
29 chr12:39687200-39696800 Weak transcription Stomach Smooth Muscle stomach
30 chr12:39687200-39726400 Weak transcription Fetal Intestine Small intestine
31 chr12:39687600-39688800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr12:39687600-39723800 Weak transcription Duodenum Mucosa Duodenum
33 chr12:39687800-39688200 Enhancers Brain Anterior Caudate brain
34 chr12:39688000-39688400 Enhancers Brain Germinal Matrix brain
35 chr12:39688000-39688800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr12:39688000-39689600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:39688000-39690400 Weak transcription Liver Liver
38 chr12:39688200-39688600 Weak transcription Brain Anterior Caudate brain
39 chr12:39688200-39689000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr12:39688200-39689200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr12:39688400-39688600 Enhancers Fetal Brain Male brain
42 chr12:39688400-39688800 Enhancers Brain Inferior Temporal Lobe brain
43 chr12:39688400-39688800 Enhancers Brain Substantia Nigra brain
44 chr12:39688400-39689000 Enhancers Brain Angular Gyrus brain
45 chr12:39688400-39689400 Enhancers Brain Cingulate Gyrus brain
46 chr12:39688400-39689400 Enhancers Brain Hippocampus Middle brain
47 chr12:39688400-39689400 Enhancers Fetal Brain Female brain
48 chr12:39688400-39694000 Weak transcription Brain Germinal Matrix brain
49 chr12:39688400-39709800 Weak transcription Ovary ovary
50 chr12:39688400-39724600 Weak transcription Esophagus oesophagus

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