Variant report

Variant	nsv561951
Chromosome Location	chr13:64253222-64314600
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr13:64282619-64282952	IMR90	lung:	n/a	chr13:64282778-64282789 chr13:64282778-64282791 chr13:64282779-64282790
2	CEBPB	chr13:64313524-64313659	HepG2	liver:	n/a	chr13:64313555-64313566
3	CEBPB	chr13:64254753-64254953	H1-hESC	embryonic stem cell:	n/a	n/a
4	CEBPB	chr13:64282631-64282951	HepG2	liver:	n/a	chr13:64282778-64282789 chr13:64282778-64282791 chr13:64282779-64282790
5	CEBPB	chr13:64282710-64282910	H1-hESC	embryonic stem cell:	n/a	chr13:64282778-64282789 chr13:64282778-64282791 chr13:64282779-64282790
6	CEBPB	chr13:64262408-64262608	HepG2	liver:	n/a	chr13:64262502-64262513
7	CTCF	chr13:64296335-64296399	Kidney_OC	kidney:	n/a	n/a
8	CTCF	chr13:64312774-64312800	Spleen_OC	spleen:	n/a	n/a
9	CTCF	chr13:64292407-64292528	Lung_OC	lung:	n/a	n/a
10	CTCF	chr13:64281020-64281170	HCPEpiC	choroid plexus:	n/a	n/a
11	CTCF	chr13:64292400-64292402	Lung_OC	lung:	n/a	n/a
12	CTCF	chr13:64261647-64261744	GM10248	blood:	n/a	n/a
13	CTCF	chr13:64258149-64258183	GM20000	blood:	n/a	n/a
14	CTCF	chr13:64281060-64281210	HCT-116	colon:	n/a	n/a
15	CTCF	chr13:64297739-64297766	LNCaP	prostate:	n/a	n/a
16	CTCF	chr13:64313949-64314007	Kidney_OC	kidney:	n/a	n/a
17	CTCF	chr13:64312154-64312170	GM20000	blood:	n/a	n/a
18	E2F4	chr13:64272471-64272531	MCF10A-Er-Src	breast:	n/a	n/a
19	E2F4	chr13:64283802-64283857	MCF10A-Er-Src	breast:	n/a	n/a
20	EBF1	chr13:64274303-64274499	GM12878	blood:	n/a	chr13:64274329-64274340
21	ELF1	chr13:64306141-64306362	HepG2	liver:	n/a	n/a
22	EP300	chr13:64264731-64265106	SK-N-SH_RA	brain:	n/a	chr13:64265088-64265097 chr13:64265061-64265075
23	EP300	chr13:64265472-64266131	SK-N-SH	brain:	n/a	n/a
24	EP300	chr13:64264643-64265393	SK-N-SH	brain:	n/a	chr13:64265088-64265097 chr13:64265061-64265075
25	EP300	chr13:64264751-64265110	SK-N-SH_RA	brain:	n/a	chr13:64265088-64265097 chr13:64265061-64265075
26	FOS	chr13:64270112-64270513	HUVEC	blood vessel:	n/a	chr13:64270234-64270244 chr13:64270233-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
27	FOS	chr13:64270202-64270498	MCF10A-Er-Src	breast:	n/a	chr13:64270234-64270244 chr13:64270233-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
28	FOS	chr13:64263502-64263733	MCF10A-Er-Src	breast:	n/a	n/a
29	FOS	chr13:64270051-64270505	MCF10A-Er-Src	breast:	n/a	chr13:64270234-64270244 chr13:64270233-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
30	FOS	chr13:64270139-64270578	MCF10A-Er-Src	breast:	n/a	chr13:64270234-64270244 chr13:64270233-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
31	FOS	chr13:64270149-64270620	MCF10A-Er-Src	breast:	n/a	chr13:64270234-64270244 chr13:64270233-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
32	FOS	chr13:64263539-64263739	MCF10A-Er-Src	breast:	n/a	n/a
33	FOXA1	chr13:64311488-64311782	HepG2	liver:	n/a	n/a
34	FOXP2	chr13:64274514-64274807	SK-N-MC	brain:	n/a	n/a
35	GATA2	chr13:64264722-64265219	SH-SY5Y	brain:	n/a	chr13:64264974-64264983 chr13:64265089-64265099
36	GATA3	chr13:64264776-64265078	SH-SY5Y	brain:	n/a	chr13:64264974-64264983
37	GATA3	chr13:64270093-64270707	SK-N-SH	brain:	n/a	chr13:64270431-64270442
38	GATA3	chr13:64265467-64266082	SK-N-SH	brain:	n/a	n/a
39	GATA3	chr13:64265539-64266330	SH-SY5Y	brain:	n/a	n/a
40	GATA3	chr13:64265548-64266024	SK-N-SH	brain:	n/a	n/a
41	GATA3	chr13:64270077-64270706	SK-N-SH	brain:	n/a	chr13:64270431-64270442
42	GATA3	chr13:64302268-64302453	SH-SY5Y	brain:	n/a	n/a
43	HNF4A	chr13:64306091-64306341	HepG2	liver:	n/a	chr13:64306252-64306266 chr13:64306252-64306267 chr13:64306252-64306266 chr13:64306252-64306267 chr13:64306252-64306267 chr13:64306240-64306248 chr13:64306253-64306265
44	HNF4A	chr13:64306080-64306344	HepG2	liver:	n/a	chr13:64306252-64306266 chr13:64306252-64306267 chr13:64306252-64306266 chr13:64306252-64306267 chr13:64306252-64306267 chr13:64306240-64306248 chr13:64306253-64306265
45	JUND	chr13:64254948-64255206	H1-hESC	embryonic stem cell:	n/a	n/a
46	JUND	chr13:64270070-64270551	Hela-S3	cervix:	n/a	chr13:64270234-64270244 chr13:64270235-64270244 chr13:64270235-64270242 chr13:64270235-64270243 chr13:64270234-64270243 chr13:64270463-64270472
47	MAFF	chr13:64306066-64306351	HepG2	liver:	n/a	chr13:64306195-64306213
48	MAFF	chr13:64259010-64259261	HepG2	liver:	n/a	chr13:64259140-64259158
49	MAFK	chr13:64258992-64259320	IMR90	lung:	n/a	n/a
50	MAFK	chr13:64262411-64262692	HepG2	liver:	n/a	chr13:64262555-64262570

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:64311555-64311605	Jurkat	blood:	n/a
2	chr13:64311397-64311447	Caco-2	colon:	n/a
3	chr13:64311397-64311447	HCT-116	colon:	n/a
4	chr13:64311555-64311605	GM12892	blood:	n/a
5	chr13:64311555-64311605	LNCaP	prostate:	n/a
6	chr13:64311555-64311605	SK-N-SH_RA	brain:	n/a
7	chr13:64311555-64311605	HIPEpiC	eye:	n/a
8	chr13:64311397-64311447	HCF	heart:	n/a
9	chr13:64311555-64311605	HCPEpiC	choroid plexus:	n/a
10	chr13:64311555-64311605	IMR90	lung:	fetal
11	chr13:64311555-64311605	T-47D	breast:	n/a
12	chr13:64311397-64311447	HMEC	breast:	n/a
13	chr13:64311397-64311447	HCM	heart:	n/a
14	chr13:64311397-64311447	Jurkat	blood:	n/a
15	chr13:64311397-64311447	HEEpiC	esophagus:	n/a
16	chr13:64311397-64311447	T-47D	breast:	n/a
17	chr13:64311555-64311605	RPTEC	kidney:	n/a
18	chr13:64311555-64311605	HEK293	kidney:	embryo
19	chr13:64311397-64311447	HRE	kidney:	n/a
20	chr13:64311397-64311447	GM12878	blood:	n/a
21	chr13:64311555-64311605	MCF10A-Er-Src	breast:	n/a
22	chr13:64311397-64311447	H1-hESC	embryonic stem cell:	embryo
23	chr13:64311555-64311605	GM12891	blood:	n/a
24	chr13:64311555-64311605	HUVEC	blood vessel:	n/a
25	chr13:64311555-64311605	Hela-S3	cervix:	n/a
26	chr13:64311397-64311447	AG04450	lung:	fetal
27	chr13:64311555-64311605	AoSMC	blood vessel:	n/a
28	chr13:64311555-64311605	AG10803	skin:	n/a
29	chr13:64311397-64311447	HepG2	liver:	n/a
30	chr13:64311555-64311605	HNPCEpiC	eye:	n/a
31	chr13:64311397-64311447	A549	lung:	n/a
32	chr13:64311555-64311605	H1-hESC	embryonic stem cell:	embryo
33	chr13:64311397-64311447	NHBE	bronchial:	n/a
34	chr13:64311555-64311605	NT2-D1	testis:	n/a
35	chr13:64311555-64311605	AG09319	gingival:	n/a
36	chr13:64311397-64311447	AG04449	skin:	fetal
37	chr13:64311555-64311605	NH-A	brain:	n/a
38	chr13:64311397-64311447	GM12892	blood:	n/a
39	chr13:64311397-64311447	AoSMC	blood vessel:	n/a
40	chr13:64311555-64311605	PFSK-1	brain:	n/a
41	chr13:64311397-64311447	HCPEpiC	choroid plexus:	n/a
42	chr13:64311397-64311447	NHDF-neo	bronchial:	n/a
43	chr13:64311397-64311447	HPAEpiC	pulmonary alveolar:	n/a
44	chr13:64311555-64311605	SK-N-MC	brain:	n/a
45	chr13:64311555-64311605	SAEC	small airway:	n/a
46	chr13:64311555-64311605	NHBE	bronchial:	n/a
47	chr13:64311555-64311605	HMEC	breast:	n/a
48	chr13:64311397-64311447	HL-60	blood:	n/a
49	chr13:64311555-64311605	HCM	heart:	n/a
50	chr13:64311397-64311447	ovcar-3	ovarian:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:64303686..64305846-chr13:64306387..64309282,2	MCF-7	breast:
2	chr13:64303686..64305846-chr13:64306387..64309282,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PCDH20-9	chr13:64312042-64312151	XLOC_010643
2	lnc-AL445989.1-20	chr13:64311843-64312482	NONHSAT034172
3	lnc-AL445989.1-20	chr13:64313246-64314310	NONHSAT034174
4	lnc-AL445989.1-20	chr13:64311843-64312416	NONHSAT034173
5	lnc-PCDH20-9	chr13:64303522-64303642	XLOC_010643
6	lnc-PCDH20-9	chr13:64288485-64288508	XLOC_010643
7	lnc-PCDH20-9	chr13:64291083-64291151	XLOC_010643
8	lnc-PCDH20-9	chr13:64301184-64301215	XLOC_010643
9	lnc-PCDH20-9	chr13:64261535-64261688	XLOC_010643
10	lnc-PCDH20-9	chr13:64303522-64303895	XLOC_010643
11	lnc-AL445989.1-20	chr13:64313246-64314376	NONHSAT034175

Variant related genes	Relation type
LINC00395	TF binding region
OR7E156P	TF binding region
LINC00395	CpG island
OR7E156P	CpG island
DUSP3	miRNA target sites
DUSP2	miRNA target sites

Extended variants
information (count: 913 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:913 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12100182	chr13:64253222-64253223	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs573552091	chr13:64253239-64253240	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs559935166	chr13:64253273-64253274	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs540731853	chr13:64253366-64253367	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs12869421	chr13:64253375-64253376	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs12869422	chr13:64253378-64253379	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs1158920	chr13:64253413-64253414	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs527896499	chr13:64253452-64253453	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs547080446	chr13:64253455-64253456	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs187185481	chr13:64253462-64253463	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs138739170	chr13:64253484-64253485	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs141188477	chr13:64253486-64253487	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs191490923	chr13:64253508-64253509	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs150297673	chr13:64253518-64253519	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs544948328	chr13:64253526-64253527	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs529262546	chr13:64253560-64253561	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs1158919	chr13:64253564-64253565	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs565094482	chr13:64253565-64253566	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs184390853	chr13:64253568-64253569	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs137862186	chr13:64253612-64253613	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs557966853	chr13:64253617-64253618	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs189875433	chr13:64253620-64253621	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs537397978	chr13:64253626-64253627	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs555327212	chr13:64253652-64253653	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs573313100	chr13:64253704-64253705	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs540589531	chr13:64253796-64253797	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs149454596	chr13:64253890-64253891	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs367991642	chr13:64253931-64253932	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs78172426	chr13:64253965-64253966	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs544764000	chr13:64253985-64253986	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs80349809	chr13:64254015-64254016	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs376818172	chr13:64254027-64254028	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs531810953	chr13:64254038-64254039	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs369848703	chr13:64254043-64254044	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs140169414	chr13:64254081-64254082	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs7987054	chr13:64254090-64254091	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs563322755	chr13:64254159-64254160	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs576733406	chr13:64254169-64254170	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs74557252	chr13:64254171-64254172	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200512433	chr13:64254182-64254183	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs374305820	chr13:64254183-64254184	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs547837883	chr13:64254187-64254188	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs566062949	chr13:64254197-64254198	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs533505910	chr13:64254213-64254214	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs547144086	chr13:64254239-64254240	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs377348585	chr13:64254242-64254243	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs551579619	chr13:64254286-64254287	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs193064069	chr13:64254314-64254315	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs536806448	chr13:64254316-64254317	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs549276516	chr13:64254319-64254320	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	17245344	CNVD
Prostate cancer	18632612	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Merkel cell carcinoma	19020549	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21858162	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Gastric cancer	17908304	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Breast cancer	17393978	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Colorectal cancer	16774939	CNVD
Adenoid cystic carcinoma	17372589	CNVD
abnormal development	18461090	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Non-syndromic sensorineural hearing loss	19036926	CNVD

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:64253200-64253400	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr13:64253200-64254200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr13:64253200-64254800	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr13:64253400-64254600	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr13:64253600-64254600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr13:64253800-64255000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr13:64254200-64254400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr13:64254200-64254600	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr13:64254200-64256200	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr13:64254600-64254800	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr13:64254600-64255000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
12	chr13:64254600-64255400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
13	chr13:64254600-64255400	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr13:64254800-64255200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr13:64254800-64255200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr13:64254800-64255200	Enhancers	Fetal Lung	lung
17	chr13:64254800-64255400	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
18	chr13:64254800-64256000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr13:64255000-64255200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
20	chr13:64255000-64255200	Active TSS	iPS-20b Cell Line	embryonic stem cell
21	chr13:64255000-64255400	Enhancers	ES-I3 Cell Line	embryonic stem cell
22	chr13:64255000-64255400	Enhancers	H1 Cell Line	embryonic stem cell
23	chr13:64255000-64255400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr13:64255000-64255400	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
25	chr13:64255200-64255400	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr13:64255200-64259000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr13:64255400-64256000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr13:64255400-64256000	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr13:64255400-64256200	Enhancers	HUES48 Cell Line	embryonic stem cell
30	chr13:64255400-64256200	Enhancers	HUES64 Cell Line	embryonic stem cell
31	chr13:64255400-64256400	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr13:64256000-64256200	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr13:64256000-64256200	Enhancers	Pancreatic Islets	Pancreatic Islet
34	chr13:64259000-64259800	Enhancers	HUES48 Cell Line	embryonic stem cell
35	chr13:64259000-64259800	Enhancers	iPS-20b Cell Line	embryonic stem cell
36	chr13:64259200-64259600	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr13:64262800-64263600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr13:64274200-64275000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr13:64274400-64274800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr13:64274400-64275000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr13:64274600-64275200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr13:64279200-64279600	Enhancers	Fetal Brain Male	brain
43	chr13:64302400-64302800	Enhancers	Fetal Intestine Small	intestine
44	chr13:64302400-64303200	Enhancers	Fetal Intestine Large	intestine
45	chr13:64302800-64303800	Weak transcription	Fetal Intestine Small	intestine
46	chr13:64303200-64303600	Weak transcription	Fetal Intestine Large	intestine
47	chr13:64303600-64303800	Enhancers	Fetal Intestine Large	intestine
48	chr13:64303800-64304400	Enhancers	Fetal Intestine Small	intestine
49	chr13:64303800-64305800	Weak transcription	Fetal Intestine Large	intestine
50	chr13:64304400-64305800	Weak transcription	Fetal Intestine Small	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links