Variant report

Variant	nsv569598
Chromosome Location	chr15:58552606-58852463
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5506)
CpG islands
(count:1955)
Chromatin interactive
region (count:303)
LncRNA
region (count:29)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:5506 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:58838842-58839281	K562	blood:	n/a	n/a
2	ARID3A	chr15:58723845-58724674	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:58722084-58722767	K562	blood:	n/a	n/a
4	ARID3A	chr15:58755905-58756780	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:58643993-58644649	K562	blood:	n/a	n/a
6	ARID3A	chr15:58588664-58588750	K562	blood:	n/a	n/a
7	ARID3A	chr15:58785240-58785433	K562	blood:	n/a	n/a
8	ARID3A	chr15:58623672-58624907	K562	blood:	n/a	n/a
9	ARID3A	chr15:58843627-58843679	K562	blood:	n/a	n/a
10	ARID3A	chr15:58691913-58692310	K562	blood:	n/a	n/a
11	ARID3A	chr15:58577390-58578554	HepG2	liver:	n/a	n/a
12	ARID3A	chr15:58595753-58595843	K562	blood:	n/a	n/a
13	ARID3A	chr15:58749976-58750707	HepG2	liver:	n/a	n/a
14	ARID3A	chr15:58684725-58684919	K562	blood:	n/a	n/a
15	ARID3A	chr15:58843760-58844405	HepG2	liver:	n/a	n/a
16	ARID3A	chr15:58820207-58820855	HepG2	liver:	n/a	n/a
17	ARID3A	chr15:58812778-58814188	K562	blood:	n/a	n/a
18	ARID3A	chr15:58761980-58762558	HepG2	liver:	n/a	n/a
19	ARID3A	chr15:58747156-58747675	HepG2	liver:	n/a	n/a
20	ARID3A	chr15:58702198-58702395	K562	blood:	n/a	n/a
21	ARID3A	chr15:58571954-58572275	K562	blood:	n/a	n/a
22	ARID3A	chr15:58707734-58708189	K562	blood:	n/a	n/a
23	ARID3A	chr15:58759096-58761393	HepG2	liver:	n/a	n/a
24	ARID3A	chr15:58844004-58844144	K562	blood:	n/a	n/a
25	ARID3A	chr15:58767778-58769308	HepG2	liver:	n/a	n/a
26	ARID3A	chr15:58641117-58641120	K562	blood:	n/a	n/a
27	ARID3A	chr15:58562136-58562529	HepG2	liver:	n/a	n/a
28	ARID3A	chr15:58731190-58731493	HepG2	liver:	n/a	n/a
29	ARID3A	chr15:58623578-58625628	HepG2	liver:	n/a	n/a
30	ARID3A	chr15:58734368-58734618	HepG2	liver:	n/a	n/a
31	ARID3A	chr15:58717507-58717628	HepG2	liver:	n/a	n/a
32	ARID3A	chr15:58712314-58712545	HepG2	liver:	n/a	n/a
33	ARID3A	chr15:58622337-58622530	K562	blood:	n/a	n/a
34	ARID3A	chr15:58704468-58704476	K562	blood:	n/a	n/a
35	ARID3A	chr15:58574582-58574862	HepG2	liver:	n/a	n/a
36	ARID3A	chr15:58733286-58733314	K562	blood:	n/a	n/a
37	ARID3A	chr15:58622250-58622584	HepG2	liver:	n/a	n/a
38	ATF1	chr15:58644160-58644708	K562	blood:	n/a	n/a
39	ATF1	chr15:58623866-58624808	K562	blood:	n/a	n/a
40	ATF1	chr15:58808004-58808383	K562	blood:	n/a	n/a
41	ATF1	chr15:58760148-58760226	K562	blood:	n/a	n/a
42	ATF1	chr15:58636458-58636758	K562	blood:	n/a	n/a
43	ATF1	chr15:58759466-58759852	K562	blood:	n/a	n/a
44	ATF1	chr15:58705605-58705761	K562	blood:	n/a	n/a
45	ATF1	chr15:58843838-58844224	K562	blood:	n/a	n/a
46	ATF1	chr15:58763625-58763852	K562	blood:	n/a	n/a
47	ATF1	chr15:58696266-58696625	K562	blood:	n/a	n/a
48	ATF1	chr15:58749705-58749952	K562	blood:	n/a	n/a
49	ATF1	chr15:58837601-58837928	K562	blood:	n/a	n/a
50	ATF1	chr15:58649514-58650152	K562	blood:	n/a	n/a

(count:1955 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:58840678-58840728	T-47D	breast:	n/a
2	chr15:58797839-58797889	HCPEpiC	choroid plexus:	n/a
3	chr15:58723879-58723929	BE2_C	brain:	n/a
4	chr15:58840678-58840728	T-47D	breast:	n/a
5	chr15:58797839-58797889	HCPEpiC	choroid plexus:	n/a
6	chr15:58723879-58723929	BE2_C	brain:	n/a
7	chr15:58724225-58724275	HPAEpiC	pulmonary alveolar:	n/a
8	chr15:58650472-58650522	AG09309	skin:	n/a
9	chr15:58699976-58700026	GM12892	blood:	n/a
10	chr15:58552619-58552669	PrEC	prostate:	n/a
11	chr15:58844583-58844633	LNCaP	prostate:	n/a
12	chr15:58699976-58700026	BE2_C	brain:	n/a
13	chr15:58844500-58844550	HCM	heart:	n/a
14	chr15:58844583-58844633	HIPEpiC	eye:	n/a
15	chr15:58791257-58791307	Hepatocyte	liver:	n/a
16	chr15:58797839-58797889	HCT-116	colon:	n/a
17	chr15:58844583-58844633	PANC-1	pancreas:	n/a
18	chr15:58732754-58732804	HPAEpiC	pulmonary alveolar:	n/a
19	chr15:58782688-58782738	ovcar-3	ovarian:	n/a
20	chr15:58758468-58758518	SAEC	small airway:	n/a
21	chr15:58723851-58723901	AG09319	gingival:	n/a
22	chr15:58600237-58600287	BE2_C	brain:	n/a
23	chr15:58732754-58732804	HL-60	blood:	n/a
24	chr15:58782688-58782738	PrEC	prostate:	n/a
25	chr15:58844359-58844409	A549	lung:	n/a
26	chr15:58839555-58839605	NHDF-neo	bronchial:	n/a
27	chr15:58624344-58624394	GM19239	blood:	n/a
28	chr15:58839555-58839605	HRPEpiC	eye:	n/a
29	chr15:58650472-58650522	GM06990	blood:	n/a
30	chr15:58844500-58844550	HCT-116	colon:	n/a
31	chr15:58553983-58554033	HEK293	kidney:	embryo
32	chr15:58782688-58782738	Hepatocyte	liver:	n/a
33	chr15:58552619-58552669	NHDF-neo	bronchial:	n/a
34	chr15:58600237-58600287	K562	blood:	n/a
35	chr15:58797839-58797889	HNPCEpiC	eye:	n/a
36	chr15:58636570-58636620	Hepatocyte	liver:	n/a
37	chr15:58732754-58732804	SK-N-MC	brain:	n/a
38	chr15:58723657-58723707	HCT-116	colon:	n/a
39	chr15:58688847-58688897	GM12891	blood:	n/a
40	chr15:58839555-58839605	HEEpiC	esophagus:	n/a
41	chr15:58624534-58624584	Hepatocyte	liver:	n/a
42	chr15:58724225-58724275	CMK	blood:	n/a
43	chr15:58782688-58782738	IMR90	lung:	fetal
44	chr15:58844359-58844409	SK-N-MC	brain:	n/a
45	chr15:58723879-58723929	ECC-1	luminal epithelium:	n/a
46	chr15:58688847-58688897	HRPEpiC	eye:	n/a
47	chr15:58844583-58844633	A549	lung:	n/a
48	chr15:58782688-58782738	SKMC	muscle:	n/a
49	chr15:58724041-58724091	ProgFib	skin:	n/a
50	chr15:58724041-58724091	SAEC	small airway:	n/a

(count:303 , 50 per page) page: 1 2 3 4 5 6 7

No.	Distal block	Cell Line	Cell type
1	chr15:58553979..58557970-chr15:58560575..58563562,3	K562	blood:
2	chr15:58726222..58728488-chr15:58751000..58752953,2	K562	blood:
3	chr15:58622014..58623960-chr15:58640512..58642662,2	MCF-7	breast:
4	chr15:58818144..58821107-chr15:58827941..58830725,2	K562	blood:
5	chr15:58729567..58734283-chr15:58741092..58746394,5	K562	blood:
6	chr15:58626290..58628080-chr15:58631126..58633534,2	MCF-7	breast:
7	chr15:58841313..58844294-chr15:58848370..58850226,2	K562	blood:
8	chr15:58571087..58573082-chr15:58578472..58580667,2	K562	blood:
9	chr15:58767133..58770014-chr15:58770584..58772843,2	MCF-7	breast:
10	chr15:58805398..58807499-chr15:58809534..58812404,4	MCF-7	breast:
11	chr15:58596834..58598473-chr15:58598758..58600301,2	MCF-7	breast:
12	chr15:58831032..58833136-chr15:58839307..58841040,2	MCF-7	breast:
13	chr15:58613929..58616800-chr15:58624666..58626264,2	MCF-7	breast:
14	chr15:58824835..58829265-chr15:58838025..58840916,5	K562	blood:
15	chr15:58700675..58704040-chr15:58709832..58712295,3	K562	blood:
16	chr15:58800980..58802725-chr15:58817478..58819244,2	K562	blood:
17	chr15:58838998..58841145-chr15:58842509..58846691,3	MCF-7	breast:
18	chr15:58681878..58684869-chr15:58759181..58760747,2	MCF-7	breast:
19	chr15:58815189..58818138-chr15:58821018..58822626,2	K562	blood:
20	chr15:58588436..58590759-chr15:58624393..58625970,2	K562	blood:
21	chr15:58595612..58601278-chr15:58601529..58605992,7	K562	blood:
22	chr15:58559095..58562120-chr15:58564838..58568362,3	K562	blood:
23	chr15:58706598..58709949-chr15:58711625..58715312,3	K562	blood:
24	chr15:58586503..58588375-chr15:58623839..58625540,2	K562	blood:
25	chr15:58800669..58805424-chr15:58807712..58810883,4	K562	blood:
26	chr15:58673814..58676049-chr15:58689856..58692132,2	K562	blood:
27	chr15:58720668..58723820-chr15:58759148..58762580,3	K562	blood:
28	chr15:58684651..58686772-chr15:58697716..58700224,2	K562	blood:
29	chr15:58595612..58601278-chr15:58601529..58605992,7	K562	blood:
30	chr15:58692442..58695392-chr15:58699146..58700725,2	MCF-7	breast:
31	chr15:58812962..58815052-chr15:58815681..58818546,2	K562	blood:
32	chr15:58518907..58522119-chr15:58624457..58627687,4	K562	blood:
33	chr15:58647497..58650190-chr15:58651237..58653668,2	MCF-7	breast:
34	chr15:58571212..58573440-chr15:58578519..58580628,2	K562	blood:
35	chr15:58593344..58595622-chr15:58598968..58601410,2	K562	blood:
36	chr15:58688310..58690112-chr15:58694254..58696812,2	K562	blood:
37	chr15:58676848..58679438-chr15:58681063..58682805,2	K562	blood:
38	chr15:58562484..58565368-chr15:58578132..58581112,2	K562	blood:
39	chr15:58559923..58562196-chr15:58623046..58625257,2	K562	blood:
40	chr15:58629271..58630848-chr15:58634623..58636893,2	MCF-7	breast:
41	chr15:58841936..58843699-chr15:59035411..59037859,2	MCF-7	breast:
42	chr15:58754820..58757599-chr15:58758355..58762013,3	K562	blood:
43	chr15:58621217..58623761-chr15:58624859..58627813,2	MCF-7	breast:
44	chr15:58815750..58818981-chr15:58825032..58827694,3	K562	blood:
45	chr15:58815189..58818138-chr15:58821018..58822626,2	K562	blood:
46	chr15:58846252..58850551-chr15:58852253..58854849,4	MCF-7	breast:
47	chr15:58567233..58568968-chr15:58622813..58624600,2	K562	blood:
48	chr15:58805398..58807499-chr15:58809534..58812404,4	MCF-7	breast:
49	chr15:58731963..58734945-chr15:58743116..58746394,3	K562	blood:
50	chr15:58825432..58828316-chr15:58831546..58833771,2	K562	blood:

(count:29 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ADAM10-2	chr15:58572415-58572683	XLOC_011486
2	lnc-ADAM10-9	chr15:58765830-58765959	NONHSAT044093
3	lnc-ADAM10-9	chr15:58571373-58571479	NONHSAT044089
4	lnc-ADAM10-2	chr15:58575124-58575190	XLOC_011486
5	lnc-ADAM10-9	chr15:58623378-58623829	NONHSAT044104
6	lnc-ALDH1A2-1	chr15:58786972-58787082	ENSG00000259293.1
7	lnc-ADAM10-9	chr15:58623378-58623578	NONHSAT044107
8	lnc-ALDH1A2-1	chr15:58790838-58790934	ENSG00000259293.1
9	lnc-ADAM10-9	chr15:58789916-58790065	NONHSAT044093
10	lnc-AQP9-4	chr15:58558672-58558889	ucscGeneNc_uc002ags_1
11	lnc-AQP9-4	chr15:58568015-58568082	ucscGeneNc_uc002ags_1
12	lnc-ADAM10-2	chr15:58576166-58576475	XLOC_011486
13	lnc-AQP9-4	chr15:58599457-58599760	ucscGeneNc_uc002ags_1
14	lnc-ALDH1A2-1	chr15:58727089-58729111	ENSG00000259293.1
15	lnc-AQP9-5	chr15:58724192-58724562	NONHSAT044110
16	lnc-ADAM10-9	chr15:58571373-58571426	NONHSAT044095
17	lnc-FAM63B-2	chr15:58814150-58815568	ENSG00000249011
18	lnc-ADAM10-9	chr15:58712170-58712304	NONHSAT044093
19	lnc-ADAM10-2	chr15:58576166-58576553	NONHSAT044109
20	lnc-AQP9-4	chr15:58609377-58610458	ucscGeneNc_uc002ags_1
21	lnc-FAM63B-2	chr15:58813510-58813845	ENSG00000249011
22	lnc-ADAM10-2	chr15:58575094-58575190	NONHSAT044109
23	lnc-FAM63B-2	chr15:58813510-58813845	ENSG00000259476.1
24	lnc-AQP9-5	chr15:58723026-58723350	NONHSAT044110
25	lnc-FAM63B-2	chr15:58814150-58815570	ENSG00000259476.1
26	lnc-ADAM10-9	chr15:58623378-58623663	NONHSAT044106
27	lnc-AQP9-5	chr15:58702780-58703017	NONHSAT044110
28	lnc-AQP9-4	chr15:58608071-58608218	ucscGeneNc_uc002ags_1
29	lnc-AQP9-4	chr15:58589899-58590024	ucscGeneNc_uc002ags_1

No data

Variant related genes	Relation type
LIPC	TF binding region
ENSG00000259476	TF binding region
ENSG00000259293	TF binding region
ALDH1A2	TF binding region
LIPC	CpG island
ENSG00000259476	CpG island
ENSG00000259293	CpG island
ALDH1A2	CpG island
ENSG00000259476	chromatin interactions
ENSG00000137845	chromatin interactions
ENSG00000166035	chromatin interactions
ENSG00000259293	chromatin interactions
ENSG00000245975	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000128923	chromatin interactions
ENSG00000128918	chromatin interactions
ENSG00000137776	chromatin interactions
ENSG00000233720	chromatin interactions
ENSG00000259285	chromatin interactions
RAB14	miRNA target sites

Extended variants
information (count: 14050 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:14050 , 50 per page) page: 1 2 3 4 5 6 7 ... 281

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7165301	chr15:58552606-58552607	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs34780867	chr15:58552660-58552661	Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs200309277	chr15:58552685-58552686	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs386784420	chr15:58552686-58552687	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs36045724	chr15:58552688-58552689	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs138760510	chr15:58552693-58552694	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs572924475	chr15:58552710-58552711	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs35022432	chr15:58552737-58552738	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs561631827	chr15:58552748-58552749	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs75437978	chr15:58552794-58552795	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs35122039	chr15:58552803-58552804	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs193065243	chr15:58552843-58552844	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs185250502	chr15:58552863-58552864	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs35319282	chr15:58552871-58552872	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs7164378	chr15:58552914-58552915	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs528881567	chr15:58553024-58553025	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs549041955	chr15:58553042-58553043	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs568736633	chr15:58553049-58553050	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs537349889	chr15:58553061-58553062	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs557489278	chr15:58553064-58553065	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs570972609	chr15:58553065-58553066	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs539520021	chr15:58553069-58553070	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs190495161	chr15:58553119-58553120	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs536866802	chr15:58553137-58553138	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs552715909	chr15:58553140-58553141	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs1711035	chr15:58553171-58553172	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs541812015	chr15:58553172-58553173	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs1711036	chr15:58553175-58553176	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs546982152	chr15:58553191-58553192	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs73416448	chr15:58553223-58553224	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs374695570	chr15:58553234-58553235	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs553397454	chr15:58553281-58553282	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs564269339	chr15:58553290-58553291	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs192526131	chr15:58553291-58553292	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs141848052	chr15:58553391-58553392	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs560282158	chr15:58553405-58553406	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs146314640	chr15:58553407-58553408	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs371816261	chr15:58553427-58553428	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs114269494	chr15:58553431-58553432	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs1663260	chr15:58553452-58553453	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs76283793	chr15:58553458-58553459	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs139492798	chr15:58553463-58553464	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs141825762	chr15:58553480-58553481	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs546829355	chr15:58553506-58553507	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs566621460	chr15:58553529-58553530	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs535557002	chr15:58553573-58553574	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs376416982	chr15:58553574-58553575	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs544426346	chr15:58553663-58553664	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs575561965	chr15:58553674-58553675	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs557962555	chr15:58553680-58553681	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Pancreatic cancer	17952125	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Autism	21865298	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:5285 , 50 per page) page: 1 2 3 4 5 6 7 ... 106

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:58541000-58552800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr15:58547000-58552800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr15:58547800-58557000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr15:58549600-58558600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr15:58550200-58554000	Enhancers	HMEC	breast
6	chr15:58550400-58552800	Weak transcription	Left Ventricle	heart
7	chr15:58550400-58561800	Weak transcription	Liver	Liver
8	chr15:58551000-58553400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr15:58551000-58553400	Enhancers	H1 Cell Line	embryonic stem cell
10	chr15:58551000-58553600	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr15:58551200-58553600	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr15:58551600-58554000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr15:58551800-58553200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr15:58551800-58553200	Enhancers	K562	blood
15	chr15:58551800-58553400	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr15:58551800-58554400	Enhancers	Placenta	Placenta
17	chr15:58552000-58552800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr15:58552000-58553200	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chr15:58552000-58553400	Enhancers	H9 Cell Line	embryonic stem cell
20	chr15:58552200-58553400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
21	chr15:58552200-58553600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr15:58552200-58553600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr15:58552400-58552800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr15:58552400-58552800	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr15:58552400-58553000	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr15:58552400-58553000	Enhancers	HSMMtube	muscle
27	chr15:58552400-58553200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr15:58552400-58553400	Enhancers	NHLF	lung
29	chr15:58552400-58553800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr15:58552400-58553800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
31	chr15:58552400-58553800	Flanking Active TSS	Hela-S3	cervix
32	chr15:58552400-58554000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr15:58552400-58554200	Enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr15:58552400-58554400	Enhancers	Psoas Muscle	Psoas
35	chr15:58552600-58552800	Enhancers	HUES48 Cell Line	embryonic stem cell
36	chr15:58552600-58552800	Flanking Active TSS	NHEK	skin
37	chr15:58552600-58553000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr15:58552600-58553200	Enhancers	Brain Anterior Caudate	brain
39	chr15:58552600-58553400	Enhancers	Primary T cells from cord blood	blood
40	chr15:58552600-58553400	Enhancers	Fetal Muscle Leg	muscle
41	chr15:58552600-58553600	Enhancers	Placenta Amnion	Placenta Amnion
42	chr15:58552600-58553800	Enhancers	Fetal Heart	heart
43	chr15:58552600-58554000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr15:58552800-58553000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
45	chr15:58552800-58553000	Enhancers	NHEK	skin
46	chr15:58552800-58553200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr15:58552800-58553400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr15:58552800-58553400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr15:58552800-58553400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr15:58552800-58553400	Enhancers	Rectal Mucosa Donor 31	rectum

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