Variant report

Variant	nsv597292
Chromosome Location	chr5:15854098-15943683
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BRCA1	chr5:15937148-15937153	HepG2	liver:	n/a	n/a
2	CEBPB	chr5:15926707-15927038	IMR90	lung:	n/a	chr5:15926917-15926925
3	CEBPB	chr5:15897835-15898091	MCF-7	breast:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15898043-15898056 chr5:15897920-15897929 chr5:15897870-15897882
4	CEBPB	chr5:15894400-15894485	A549	lung:	n/a	chr5:15894464-15894475
5	CEBPB	chr5:15897732-15898113	IMR90	lung:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15898043-15898056 chr5:15897920-15897929 chr5:15897870-15897882
6	CEBPB	chr5:15905142-15905350	HepG2	liver:	n/a	chr5:15905235-15905252 chr5:15905237-15905248
7	CEBPB	chr5:15897830-15898067	Hela-S3	cervix:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15898043-15898056 chr5:15897920-15897929 chr5:15897870-15897882
8	CEBPB	chr5:15905060-15905383	IMR90	lung:	n/a	chr5:15905235-15905252 chr5:15905237-15905248
9	CEBPB	chr5:15894389-15894624	HepG2	liver:	n/a	chr5:15894464-15894475
10	CEBPB	chr5:15885310-15885691	IMR90	lung:	n/a	n/a
11	CEBPB	chr5:15897756-15898111	A549	lung:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15898043-15898056 chr5:15897920-15897929 chr5:15897870-15897882
12	CEBPB	chr5:15897746-15898054	H1-hESC	embryonic stem cell:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15897920-15897929 chr5:15897870-15897882
13	CEBPB	chr5:15897863-15898048	K562	blood:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15897920-15897929 chr5:15897870-15897882
14	CEBPB	chr5:15897753-15898080	HepG2	liver:	n/a	chr5:15897920-15897929 chr5:15897920-15897929 chr5:15898043-15898056 chr5:15897920-15897929 chr5:15897870-15897882
15	CHD2	chr5:15937005-15937074	K562	blood:	n/a	n/a
16	CHD2	chr5:15883201-15883291	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr5:15928920-15929070	Caco-2	colon:	n/a	n/a
18	CTCF	chr5:15865320-15865470	GM12873	blood:	n/a	n/a
19	CTCF	chr5:15941460-15941610	HAc	cerebellar:	n/a	chr5:15941494-15941503
20	CTCF	chr5:15884134-15884211	GM10248	blood:	n/a	n/a
21	CTCF	chr5:15941295-15941752	MCF-7	breast:	n/a	chr5:15941494-15941503
22	CTCF	chr5:15935312-15935409	MCF-7	breast:	n/a	n/a
23	CTCF	chr5:15936840-15936990	GM12867	blood:	n/a	n/a
24	CTCF	chr5:15941480-15941630	HEK293	kidney:	n/a	chr5:15941494-15941503
25	CTCF	chr5:15871482-15871532	LNCaP	prostate:	n/a	n/a
26	CTCF	chr5:15941389-15941549	MCF-7	breast:	n/a	chr5:15941494-15941503
27	CTCF	chr5:15927340-15927490	NHLF	lung:	n/a	n/a
28	CTCF	chr5:15941400-15941550	BE2_C	brain:	n/a	chr5:15941494-15941503
29	CTCF	chr5:15870500-15870650	NHLF	lung:	n/a	n/a
30	CTCF	chr5:15878121-15878147	GM20000	blood:	n/a	n/a
31	CTCF	chr5:15941340-15941490	HCFaa	heart:	n/a	n/a
32	CTCF	chr5:15941375-15941582	MCF-7	breast:	n/a	chr5:15941494-15941503
33	CTCF	chr5:15941400-15941550	HepG2	liver:	n/a	chr5:15941494-15941503
34	CTCF	chr5:15921400-15921461	GM20000	blood:	n/a	n/a
35	CTCF	chr5:15941420-15941570	HBMEC	blood vessel:	n/a	chr5:15941494-15941503
36	CTCF	chr5:15941222-15941636	MCF-7	breast:	n/a	chr5:15941494-15941503
37	CTCF	chr5:15941440-15941590	BE2_C	brain:	n/a	chr5:15941494-15941503
38	CTCF	chr5:15941460-15941610	HRPEpiC	eye:	n/a	chr5:15941494-15941503
39	CTCF	chr5:15941420-15941570	MCF-7	breast:	n/a	chr5:15941494-15941503
40	CTCF	chr5:15941320-15941470	MCF-7	breast:	n/a	n/a
41	CTCF	chr5:15941362-15941604	MCF-7	breast:	n/a	chr5:15941494-15941503
42	CTCF	chr5:15941360-15941510	AG04450	lung:	n/a	chr5:15941494-15941503
43	CTCF	chr5:15920110-15920123	GM20000	blood:	n/a	n/a
44	CTCF	chr5:15941406-15941508	MCF-7	breast:	n/a	chr5:15941494-15941503
45	FOS	chr5:15939134-15939457	MCF10A-Er-Src	breast:	n/a	chr5:15939306-15939317
46	FOS	chr5:15913793-15914165	MCF10A-Er-Src	breast:	n/a	n/a
47	FOS	chr5:15939118-15939476	MCF10A-Er-Src	breast:	n/a	chr5:15939306-15939317
48	FOS	chr5:15939179-15939432	MCF10A-Er-Src	breast:	n/a	chr5:15939306-15939317
49	FOS	chr5:15939070-15939646	HUVEC	blood vessel:	n/a	chr5:15939306-15939317
50	FOS	chr5:15913789-15914045	MCF10A-Er-Src	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:15865364-15865414	HRPEpiC	eye:	n/a
2	chr5:15865364-15865414	HRPEpiC	eye:	n/a
3	chr5:15928686-15928736	HRPEpiC	eye:	n/a
4	chr5:15927184-15927234	NT2-D1	testis:	n/a
5	chr5:15886517-15886567	AG04449	skin:	fetal
6	chr5:15939534-15939584	HRE	kidney:	n/a
7	chr5:15936642-15936692	ECC-1	luminal epithelium:	n/a
8	chr5:15937169-15937219	HL-60	blood:	n/a
9	chr5:15928366-15928416	HMEC	breast:	n/a
10	chr5:15886517-15886567	AG04450	lung:	fetal
11	chr5:15935879-15935929	PANC-1	pancreas:	n/a
12	chr5:15935879-15935929	SK-N-MC	brain:	n/a
13	chr5:15936768-15936818	HMEC	breast:	n/a
14	chr5:15927655-15927705	HNPCEpiC	eye:	n/a
15	chr5:15928686-15928736	HEEpiC	esophagus:	n/a
16	chr5:15927655-15927705	T-47D	breast:	n/a
17	chr5:15928686-15928736	Caco-2	colon:	n/a
18	chr5:15936642-15936692	IMR90	lung:	fetal
19	chr5:15928089-15928139	AoSMC	blood vessel:	n/a
20	chr5:15939534-15939584	HCM	heart:	n/a
21	chr5:15928089-15928139	HCT-116	colon:	n/a
22	chr5:15936642-15936692	HepG2	liver:	n/a
23	chr5:15927184-15927234	PFSK-1	brain:	n/a
24	chr5:15936758-15936808	A549	lung:	n/a
25	chr5:15927184-15927234	MCF10A-Er-Src	breast:	n/a
26	chr5:15935879-15935929	HPAEpiC	pulmonary alveolar:	n/a
27	chr5:15928366-15928416	HAEpiC	amniotic membrane:	n/a
28	chr5:15897924-15897974	HMEC	breast:	n/a
29	chr5:15918940-15918990	Caco-2	colon:	n/a
30	chr5:15930438-15930488	T-47D	breast:	n/a
31	chr5:15928686-15928736	PFSK-1	brain:	n/a
32	chr5:15935639-15935689	HCF	heart:	n/a
33	chr5:15939534-15939584	SK-N-SH_RA	brain:	n/a
34	chr5:15936768-15936818	Caco-2	colon:	n/a
35	chr5:15935380-15935430	HEEpiC	esophagus:	n/a
36	chr5:15936758-15936808	HRPEpiC	eye:	n/a
37	chr5:15936758-15936808	AG09319	gingival:	n/a
38	chr5:15925265-15925315	K562	blood:	n/a
39	chr5:15937169-15937219	HCM	heart:	n/a
40	chr5:15928686-15928736	SK-N-MC	brain:	n/a
41	chr5:15935639-15935689	NHDF-neo	bronchial:	n/a
42	chr5:15918940-15918990	HCPEpiC	choroid plexus:	n/a
43	chr5:15937169-15937219	HPAEpiC	pulmonary alveolar:	n/a
44	chr5:15928441-15928491	LNCaP	prostate:	n/a
45	chr5:15935380-15935430	HCM	heart:	n/a
46	chr5:15936642-15936692	H1-hESC	embryonic stem cell:	embryo
47	chr5:15886517-15886567	HRCEpiC	kidney:	n/a
48	chr5:15936642-15936692	GM12878	blood:	n/a
49	chr5:15927184-15927234	HAEpiC	amniotic membrane:	n/a
50	chr5:15927184-15927234	U87	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:15941095..15942002-chr5:15995664..15996228,2	MCF-7	breast:
2	chr5:15940925..15941957-chr5:15995066..15996242,6	MCF-7	breast:
3	chr5:15926786..15928687-chr5:15937563..15939757,2	K562	blood:
4	chr5:15898065..15900379-chr5:16172599..16174745,2	K562	blood:
5	chr5:15926786..15928687-chr5:15937563..15939757,2	K562	blood:
6	chr5:15933771..15936627-chr5:15939185..15940965,2	MCF-7	breast:

miRNA name	Chromosome Location	mirBase accession
hsa-miR-887-5p	chr5:15935300-15935320	MIMAT0026720
hsa-miR-887-3p	chr5:15935338-15935359	MIMAT0004951

Variant related genes	Relation type
MIR887	TF binding region
MIR887	CpG island
ENSG00000216077	chromatin interactions
MTHFD1L	Mature miRNA region

Extended variants
information (count: 3341 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:3341 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs257741	chr5:15854098-15854099	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs560880794	chr5:15854102-15854103	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs192617233	chr5:15854137-15854138	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs75363185	chr5:15854148-15854149	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs533410044	chr5:15854221-15854222	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs545149360	chr5:15854235-15854236	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs184646691	chr5:15854293-15854294	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs574176853	chr5:15854330-15854331	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs373665777	chr5:15854334-15854335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs189515794	chr5:15854385-15854386	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs73752328	chr5:15854394-15854395	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs534111984	chr5:15854431-15854432	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs373949265	chr5:15854432-15854433	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs180753493	chr5:15854437-15854438	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs115440240	chr5:15854499-15854500	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs553387623	chr5:15854519-15854520	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571911575	chr5:15854560-15854561	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs184885413	chr5:15854568-15854569	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs368957034	chr5:15854633-15854634	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs538664074	chr5:15854688-15854689	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs146463643	chr5:15854731-15854732	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs546085920	chr5:15854739-15854740	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs78612657	chr5:15854774-15854775	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs140775864	chr5:15854776-15854777	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs189401727	chr5:15854800-15854801	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs371262939	chr5:15854810-15854811	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs530670349	chr5:15854838-15854839	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs435109	chr5:15854841-15854842	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs564037633	chr5:15854861-15854862	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs144587183	chr5:15854877-15854878	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs577942146	chr5:15854900-15854901	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs545351059	chr5:15854906-15854907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs369688857	chr5:15854908-15854909	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs563551763	chr5:15854909-15854910	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs368338286	chr5:15854923-15854924	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs542719495	chr5:15854935-15854936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs148198196	chr5:15854970-15854971	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs368324899	chr5:15854993-15854994	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs528300029	chr5:15855024-15855025	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs546476098	chr5:15855104-15855105	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs149065780	chr5:15855134-15855135	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs528111532	chr5:15855168-15855169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs571486758	chr5:15855228-15855229	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs34717700	chr5:15855244-15855245	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs547729033	chr5:15855288-15855289	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs141555442	chr5:15855344-15855345	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs563006229	chr5:15855378-15855379	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs398082	chr5:15855414-15855415	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs150484449	chr5:15855423-15855424	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs568771534	chr5:15855433-15855434	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Lung cancer	19547694	CNVD
Cri-du chat syndrome	22283845	CNVD
Disorders of sex development	21048976	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Honadal dysgenesis	21048976	CNVD
Cancer	16751803	CNVD
Breast cancer	17133270	CNVD
Hepatocellular carcinoma	22174799	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Salivary gland tumor	18059337	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Kartagener syndrome	16639409	CNVD
Medulloblastoma	21979893	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Multiple myeloma	17550852	CNVD
prenatal diagnosis	22389664	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Breast cancer	21858162	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Intellectual disability	22102821	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Breast cancer	21364760	CNVD
Williams Syndrome	20824207	CNVD
Urothelial carcinoma	21177765	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Myoepithelioma	18604193	CNVD
Lung cancer	16740712	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:919 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:15849800-15854600	Enhancers	Fetal Heart	heart
2	chr5:15851200-15856400	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr5:15851400-15854600	Enhancers	Fetal Lung	lung
4	chr5:15851400-15856400	Weak transcription	Aorta	Aorta
5	chr5:15851800-15870400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr5:15852800-15854600	Weak transcription	HUVEC	blood vessel
7	chr5:15853400-15865200	Weak transcription	Ovary	ovary
8	chr5:15853800-15854800	Weak transcription	Adipose Nuclei	Adipose
9	chr5:15853800-15856400	Weak transcription	Psoas Muscle	Psoas
10	chr5:15853800-15861400	Weak transcription	Fetal Muscle Leg	muscle
11	chr5:15854000-15854200	Enhancers	Colon Smooth Muscle	Colon
12	chr5:15854000-15856400	Weak transcription	Left Ventricle	heart
13	chr5:15854600-15855000	Weak transcription	Fetal Heart	heart
14	chr5:15854600-15855600	Enhancers	HUVEC	blood vessel
15	chr5:15854800-15855000	Enhancers	Adipose Nuclei	Adipose
16	chr5:15855000-15855200	Enhancers	Fetal Heart	heart
17	chr5:15855200-15857200	Weak transcription	Fetal Heart	heart
18	chr5:15855800-15865600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr5:15856400-15856600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
20	chr5:15856400-15856600	ZNF genes & repeats	Aorta	Aorta
21	chr5:15856400-15856600	Enhancers	Left Ventricle	heart
22	chr5:15856400-15856600	ZNF genes & repeats	Psoas Muscle	Psoas
23	chr5:15856600-15857000	Weak transcription	Left Ventricle	heart
24	chr5:15856600-15858400	Weak transcription	Psoas Muscle	Psoas
25	chr5:15856600-15858800	Weak transcription	Cortex derived primary cultured neurospheres	brain
26	chr5:15856600-15861400	Weak transcription	Aorta	Aorta
27	chr5:15857000-15857600	Enhancers	Left Ventricle	heart
28	chr5:15857200-15858000	Enhancers	Fetal Heart	heart
29	chr5:15857400-15857600	ZNF genes & repeats	Fetal Brain Male	brain
30	chr5:15857600-15861600	Weak transcription	Fetal Brain Male	brain
31	chr5:15857600-15865200	Weak transcription	Left Ventricle	heart
32	chr5:15858000-15859200	Weak transcription	Fetal Heart	heart
33	chr5:15859200-15860600	Enhancers	Fetal Heart	heart
34	chr5:15859600-15861800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr5:15860600-15860800	Flanking Active TSS	Fetal Heart	heart
36	chr5:15860600-15861400	Weak transcription	Right Ventricle	heart
37	chr5:15860800-15861000	Enhancers	Fetal Heart	heart
38	chr5:15861000-15861200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr5:15861000-15861200	Flanking Active TSS	Fetal Heart	heart
40	chr5:15861000-15861600	Enhancers	HSMMtube	muscle
41	chr5:15861200-15861600	Enhancers	Fetal Heart	heart
42	chr5:15861200-15870000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr5:15861400-15861600	ZNF genes & repeats	Aorta	Aorta
44	chr5:15861400-15861600	Enhancers	Right Ventricle	heart
45	chr5:15861600-15863000	Weak transcription	Fetal Heart	heart
46	chr5:15861600-15863800	Weak transcription	Right Ventricle	heart
47	chr5:15861600-15865200	Weak transcription	Aorta	Aorta
48	chr5:15862000-15865200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr5:15862800-15863200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr5:15862800-15864800	Weak transcription	Fetal Stomach	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links