Variant report

Variant	nsv598324
Chromosome Location	chr5:61430431-61461609
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr5:61434610-61434737	H1-hESC	embryonic stem cell:	n/a	n/a
2	CEBPB	chr5:61435688-61435816	K562	blood:	n/a	chr5:61435701-61435712
3	CEBPB	chr5:61459905-61460138	K562	blood:	n/a	n/a
4	CEBPB	chr5:61435638-61435838	HepG2	liver:	n/a	chr5:61435701-61435712
5	CTCF	chr5:61439640-61439790	HVMF	connective:	n/a	chr5:61439644-61439660 chr5:61439643-61439661
6	CTCF	chr5:61439320-61439470	GM06990	blood:	n/a	n/a
7	CTCF	chr5:61439562-61439790	MCF-7	breast:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
8	CTCF	chr5:61439620-61439770	AG09309	skin:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
9	CTCF	chr5:61439620-61439770	HCM	heart:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
10	CTCF	chr5:61439600-61439736	GM13976	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
11	CTCF	chr5:61439560-61439710	GM12872	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
12	CTCF	chr5:61439600-61439750	MCF-7	breast:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
13	CTCF	chr5:61439600-61439750	GM12878	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
14	CTCF	chr5:61439580-61439730	AG10803	skin:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
15	CTCF	chr5:61439560-61439710	SK-N-SH_RA	brain:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
16	CTCF	chr5:61454700-61454850	HepG2	liver:	n/a	n/a
17	CTCF	chr5:61439500-61439650	HepG2	liver:	n/a	n/a
18	CTCF	chr5:61439600-61439750	HEEpiC	esophagus:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
19	CTCF	chr5:61439560-61439710	RPTEC	kidney:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
20	CTCF	chr5:61439640-61439790	GM12873	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661
21	CTCF	chr5:61439600-61439750	HRE	kidney:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
22	CTCF	chr5:61440060-61440210	BE2_C	brain:	n/a	n/a
23	CTCF	chr5:61439520-61439670	GM12867	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
24	CTCF	chr5:61439580-61439730	K562	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
25	CTCF	chr5:61442440-61442590	GM12865	blood:	n/a	n/a
26	CTCF	chr5:61439540-61439690	HMEC	breast:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
27	CTCF	chr5:61439580-61439730	AG09319	gingival:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
28	CTCF	chr5:61439575-61439762	Kidney_OC	kidney:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
29	CTCF	chr5:61440400-61440550	HCFaa	heart:	n/a	n/a
30	CTCF	chr5:61439462-61439809	A549	lung:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
31	CTCF	chr5:61433020-61433170	Hela-S3	cervix:	n/a	n/a
32	CTCF	chr5:61439520-61439670	NHDF-neo	bronchial:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
33	CTCF	chr5:61440667-61440710	GM12891	blood:	n/a	n/a
34	CTCF	chr5:61439900-61440050	AG04450	lung:	n/a	n/a
35	CTCF	chr5:61439458-61439853	GM12878	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
36	CTCF	chr5:61454121-61454160	Kidney_OC	kidney:	n/a	n/a
37	CTCF	chr5:61439180-61439330	NHLF	lung:	n/a	n/a
38	CTCF	chr5:61439560-61439777	GM13977	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
39	CTCF	chr5:61439820-61439970	GM12872	blood:	n/a	n/a
40	CTCF	chr5:61439520-61439670	HRE	kidney:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
41	CTCF	chr5:61439600-61439750	GM06990	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
42	CTCF	chr5:61439571-61439758	Lung_OC	lung:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
43	CTCF	chr5:61439520-61439670	HepG2	liver:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
44	CTCF	chr5:61439620-61439770	HFF-Myc	foreskin:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
45	CTCF	chr5:61439560-61439710	GM12873	blood:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
46	CTCF	chr5:61439580-61439730	HPAF	blood vessel:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
47	CTCF	chr5:61439560-61439710	AG04450	lung:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
48	CTCF	chr5:61439620-61439770	HMEC	breast:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659
49	CTCF	chr5:61439420-61439570	A549	lung:	n/a	n/a
50	CTCF	chr5:61439393-61439898	MCF-7	breast:	n/a	chr5:61439644-61439660 chr5:61439643-61439661 chr5:61439638-61439659

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:61439790-61439840	GM06990	blood:	n/a
2	chr5:61439790-61439840	ProgFib	skin:	n/a
3	chr5:61439790-61439840	ovcar-3	ovarian:	n/a
4	chr5:61433576-61433626	HCT-116	colon:	n/a
5	chr5:61439790-61439840	AG04450	lung:	fetal
6	chr5:61433576-61433626	Hepatocyte	liver:	n/a
7	chr5:61433576-61433626	HL-60	blood:	n/a
8	chr5:61433576-61433626	NT2-D1	testis:	n/a
9	chr5:61433576-61433626	ovcar-3	ovarian:	n/a
10	chr5:61433576-61433626	MCF10A-Er-Src	breast:	n/a
11	chr5:61439790-61439840	SKMC	muscle:	n/a
12	chr5:61439790-61439840	HCPEpiC	choroid plexus:	n/a
13	chr5:61433576-61433626	MCF-7	breast:	n/a
14	chr5:61439790-61439840	ECC-1	luminal epithelium:	n/a
15	chr5:61439790-61439840	CMK	blood:	n/a
16	chr5:61433576-61433626	HCF	heart:	n/a
17	chr5:61433576-61433626	GM12878	blood:	n/a
18	chr5:61433576-61433626	HIPEpiC	eye:	n/a
19	chr5:61439790-61439840	IMR90	lung:	fetal
20	chr5:61439790-61439840	HepG2	liver:	n/a
21	chr5:61433576-61433626	GM12892	blood:	n/a
22	chr5:61439790-61439840	MCF10A-Er-Src	breast:	n/a
23	chr5:61439790-61439840	HRCEpiC	kidney:	n/a
24	chr5:61433576-61433626	NHDF-neo	bronchial:	n/a
25	chr5:61439790-61439840	HMEC	breast:	n/a
26	chr5:61433576-61433626	U87	brain:	n/a
27	chr5:61439790-61439840	HCT-116	colon:	n/a
28	chr5:61433576-61433626	HPAEpiC	pulmonary alveolar:	n/a
29	chr5:61439790-61439840	HNPCEpiC	eye:	n/a
30	chr5:61433576-61433626	Caco-2	colon:	n/a
31	chr5:61439790-61439840	SK-N-SH_RA	brain:	n/a
32	chr5:61433576-61433626	H1-hESC	embryonic stem cell:	embryo
33	chr5:61439790-61439840	Hepatocyte	liver:	n/a
34	chr5:61439790-61439840	AG10803	skin:	n/a
35	chr5:61433576-61433626	HRPEpiC	eye:	n/a
36	chr5:61439790-61439840	GM19239	blood:	n/a
37	chr5:61433576-61433626	HNPCEpiC	eye:	n/a
38	chr5:61433576-61433626	Hela-S3	cervix:	n/a
39	chr5:61433576-61433626	HepG2	liver:	n/a
40	chr5:61439790-61439840	MCF-7	breast:	n/a
41	chr5:61439790-61439840	HAEpiC	amniotic membrane:	n/a
42	chr5:61433576-61433626	HEK293	kidney:	embryo
43	chr5:61439790-61439840	SK-N-MC	brain:	n/a
44	chr5:61433576-61433626	CMK	blood:	n/a
45	chr5:61433576-61433626	ProgFib	skin:	n/a
46	chr5:61439790-61439840	SK-N-SH	brain:	n/a
47	chr5:61433576-61433626	AG10803	skin:	n/a
48	chr5:61439790-61439840	AoSMC	blood vessel:	n/a
49	chr5:61433576-61433626	PANC-1	pancreas:	n/a
50	chr5:61433576-61433626	AG04450	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr5:61422681..61424219-chr5:61436524..61438145,2	MCF-7	breast:
2	chr5:61229619..61230608-chr5:61439489..61440182,2	MCF-7	breast:
3	chr5:61426729..61428623-chr5:61433121..61435714,2	K562	blood:
4	chr5:61437415..61439852-chr5:61446212..61449062,2	K562	blood:
5	chr5:61424317..61428011-chr5:61428590..61430862,3	K562	blood:
6	chr5:61442438..61445370-chr5:61445571..61447544,2	MCF-7	breast:
7	chr5:61437415..61439852-chr5:61446212..61449062,2	K562	blood:
8	chr12:125398291..125400539-chr5:61461576..61463918,2	MCF-7	breast:
9	chr5:61439485..61439993-chr5:61501806..61502567,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIF2A-2	chr5:61442492-61442773	NONHSAT101705

Variant related genes	Relation type
RN7SKP157	TF binding region
RN7SKP157	CpG island
ENSG00000265345	chromatin interactions
ENSG00000251983	chromatin interactions
ENSG00000150991	chromatin interactions

Extended variants
information (count: 645 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:645 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2910472	chr5:61430431-61430432	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs77281444	chr5:61430451-61430452	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs72767021	chr5:61430471-61430472	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs2910473	chr5:61430474-61430475	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs540241567	chr5:61430485-61430486	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs560568652	chr5:61430560-61430561	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs183682020	chr5:61430626-61430627	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs76730500	chr5:61430646-61430647	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs80038443	chr5:61430661-61430662	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs548434711	chr5:61430666-61430667	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs568365140	chr5:61430668-61430669	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs537998744	chr5:61430679-61430680	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs55777844	chr5:61430690-61430691	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs201989910	chr5:61430737-61430738	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs539148983	chr5:61430808-61430809	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs574441846	chr5:61430810-61430811	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs557780406	chr5:61430820-61430821	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs569503326	chr5:61430881-61430882	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs188782724	chr5:61430926-61430927	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs140069894	chr5:61430935-61430936	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs193245738	chr5:61430936-61430937	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs541841023	chr5:61430945-61430946	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs566438614	chr5:61430946-61430947	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs185359372	chr5:61430949-61430950	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs555602462	chr5:61430985-61430986	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs575572253	chr5:61431017-61431018	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs554134304	chr5:61431029-61431030	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs544396791	chr5:61431048-61431049	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs557956005	chr5:61431071-61431072	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs190157581	chr5:61431081-61431082	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs145847913	chr5:61431112-61431113	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs560403560	chr5:61431115-61431116	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs529239271	chr5:61431175-61431176	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs35314568	chr5:61431176-61431177	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs542663239	chr5:61431185-61431186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs35337032	chr5:61431186-61431187	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs138693447	chr5:61431195-61431196	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs556716287	chr5:61432450-61432451	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs371558564	chr5:61432595-61432596	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs140121830	chr5:61432615-61432616	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
41	rs556406264	chr5:61432676-61432677	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
42	rs143729383	chr5:61432731-61432732	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
43	rs540399146	chr5:61432742-61432743	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
44	rs560121011	chr5:61432798-61432799	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
45	rs4700478	chr5:61432808-61432809	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs548636825	chr5:61432858-61432859	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
47	rs2961836	chr5:61432859-61432860	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs531168478	chr5:61432868-61432869	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
49	rs551002398	chr5:61432934-61432935	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs571904933	chr5:61432942-61432943	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Prostate cancer	21965145	CNVD
Esophageal cancer	20955586	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Ovarian cancer	20844748	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute myeloid leukemia	21251322	CNVD
Oral cancer	21386901	CNVD
Bladder cancer	21909424	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	17133270	CNVD
Breast cancer	19602461	CNVD
Renal cell carcinoma	18194544	CNVD
abnormal development	18461090	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21364760	CNVD
Colorectal cancer	16774939	CNVD
Myelofibrosis	22110671	CNVD
Neuroticism	17667963	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:215 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:61428800-61430600	Weak transcription	HMEC	breast
2	chr5:61430400-61430600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr5:61430400-61431000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr5:61430600-61431200	Enhancers	HMEC	breast
5	chr5:61430800-61431200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr5:61432400-61433200	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr5:61432600-61432800	Enhancers	H9 Cell Line	embryonic stem cell
8	chr5:61432600-61433200	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
9	chr5:61432600-61433400	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr5:61432600-61433600	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr5:61432800-61433000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
12	chr5:61432800-61433000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr5:61432800-61433000	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr5:61432800-61433200	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr5:61432800-61433200	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr5:61432800-61433200	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr5:61432800-61434400	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr5:61433000-61433200	Enhancers	H1 Cell Line	embryonic stem cell
19	chr5:61433000-61433200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr5:61433000-61434200	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr5:61433000-61434400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
22	chr5:61433200-61433400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr5:61433200-61434200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
24	chr5:61433200-61434200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
25	chr5:61433200-61434400	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr5:61433200-61434400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr5:61433200-61434400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr5:61433200-61434400	Weak transcription	HUES48 Cell Line	embryonic stem cell
29	chr5:61433200-61434800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr5:61433400-61433800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
31	chr5:61433400-61434000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr5:61433600-61434000	Weak transcription	HUES64 Cell Line	embryonic stem cell
33	chr5:61433800-61435200	Enhancers	iPS-18 Cell Line	embryonic stem cell
34	chr5:61434000-61434600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr5:61434000-61435200	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr5:61434200-61434800	Enhancers	iPS-20b Cell Line	embryonic stem cell
37	chr5:61434200-61435200	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr5:61434200-61435200	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr5:61434200-61435400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr5:61434400-61434600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr5:61434400-61434800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr5:61434400-61434800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr5:61434400-61434800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr5:61434400-61434800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr5:61434400-61434800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr5:61434400-61435000	Enhancers	H9 Cell Line	embryonic stem cell
47	chr5:61434400-61435000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr5:61434400-61435000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr5:61434400-61435200	Enhancers	H1 Cell Line	embryonic stem cell
50	chr5:61434400-61435200	Enhancers	HUES48 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links