Variant report

Variant nsv599487
Chromosome Location chr5:116732456-116772093
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:116732800-116734400 Enhancers Fetal Lung lung
2 chr5:116733200-116734600 Enhancers Fetal Stomach stomach
3 chr5:116733800-116734200 Enhancers Fetal Brain Female brain
4 chr5:116733800-116734800 Enhancers Brain Germinal Matrix brain
5 chr5:116739200-116740000 Enhancers Rectal Mucosa Donor 31 rectum
6 chr5:116739800-116740400 Active TSS Placenta Placenta
7 chr5:116740000-116741000 Active TSS Hela-S3 cervix
8 chr5:116740000-116741200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr5:116741000-116741800 Enhancers Colon Smooth Muscle Colon
10 chr5:116741200-116741800 Enhancers Rectal Mucosa Donor 29 rectum
11 chr5:116741200-116742000 Enhancers Rectal Mucosa Donor 31 rectum
12 chr5:116747000-116748200 Enhancers HUVEC blood vessel
13 chr5:116747200-116747600 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr5:116747200-116747600 Enhancers HUES48 Cell Line embryonic stem cell
15 chr5:116747200-116747600 Enhancers HUES6 Cell Line embryonic stem cell
16 chr5:116747200-116747800 Enhancers Sigmoid Colon Sigmoid Colon
17 chr5:116747200-116748000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr5:116747400-116747800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr5:116747400-116747800 Enhancers Rectal Mucosa Donor 29 rectum
20 chr5:116748000-116748800 Enhancers Fetal Lung lung
21 chr5:116748800-116752600 Weak transcription Fetal Lung lung
22 chr5:116750600-116753200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr5:116752600-116752800 Enhancers Fetal Lung lung
24 chr5:116752800-116753200 Weak transcription Fetal Lung lung
25 chr5:116753200-116753600 Enhancers Fetal Lung lung
26 chr5:116756400-116756800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:116760400-116761800 Enhancers HUES6 Cell Line embryonic stem cell
28 chr5:116760400-116761800 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr5:116760800-116761400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr5:116760800-116761600 Enhancers HUES64 Cell Line embryonic stem cell
31 chr5:116761000-116761400 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr5:116761000-116761400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr5:116766600-116766800 Enhancers Stomach Smooth Muscle stomach
34 chr5:116766600-116767400 Enhancers Colon Smooth Muscle Colon
35 chr5:116766600-116767400 Enhancers Rectal Smooth Muscle rectum
36 chr5:116766800-116767400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr5:116766800-116769600 Weak transcription Stomach Smooth Muscle stomach
38 chr5:116767400-116769000 Weak transcription Colon Smooth Muscle Colon
39 chr5:116767400-116769400 Weak transcription Rectal Smooth Muscle rectum
40 chr5:116767800-116768000 Enhancers Fetal Stomach stomach
41 chr5:116768000-116769000 Weak transcription Fetal Stomach stomach
42 chr5:116769000-116770400 Enhancers Fetal Stomach stomach
43 chr5:116769000-116772200 Enhancers Colon Smooth Muscle Colon
44 chr5:116769400-116769800 Enhancers ES-WA7 Cell Line embryonic stem cell
45 chr5:116769400-116770200 Enhancers H9 Cell Line embryonic stem cell
46 chr5:116769400-116770400 Enhancers HUES6 Cell Line embryonic stem cell
47 chr5:116769400-116770600 Enhancers HUES48 Cell Line embryonic stem cell
48 chr5:116769400-116770600 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr5:116769400-116770800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr5:116769400-116770800 Enhancers iPS-18 Cell Line embryonic stem cell

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