Variant report

Variant nsv600452
Chromosome Location chr5:178180299-178241495
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:174 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178166600-178224000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr5:178179800-178181000 Weak transcription Fetal Kidney kidney
3 chr5:178180200-178180800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr5:178180600-178181200 Enhancers Fetal Intestine Large intestine
5 chr5:178181000-178182000 Enhancers Fetal Kidney kidney
6 chr5:178181400-178186200 Weak transcription H9 Cell Line embryonic stem cell
7 chr5:178182000-178182400 Weak transcription Fetal Kidney kidney
8 chr5:178182400-178183000 Enhancers Fetal Kidney kidney
9 chr5:178183400-178213200 Weak transcription K562 blood
10 chr5:178185200-178188000 Enhancers Placenta Placenta
11 chr5:178188000-178189400 Weak transcription Placenta Placenta
12 chr5:178189400-178190600 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr5:178189400-178190600 Enhancers Placenta Placenta
14 chr5:178189600-178190000 Enhancers Esophagus oesophagus
15 chr5:178189800-178190000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:178190000-178190400 Weak transcription Esophagus oesophagus
17 chr5:178190000-178192800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:178190400-178190600 Enhancers Esophagus oesophagus
19 chr5:178190600-178192600 Weak transcription Esophagus oesophagus
20 chr5:178192600-178195000 Enhancers Esophagus oesophagus
21 chr5:178192800-178193000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr5:178194000-178194200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr5:178194200-178195800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr5:178195000-178195200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr5:178195600-178196400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr5:178195800-178196000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr5:178196000-178199400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr5:178196400-178197000 Enhancers Pancreas Pancrea
29 chr5:178196600-178197000 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr5:178196600-178197200 Enhancers Adipose Nuclei Adipose
31 chr5:178196600-178197200 Enhancers Fetal Lung lung
32 chr5:178196600-178197400 Bivalent Enhancer Fetal Muscle Trunk muscle
33 chr5:178196800-178197200 Enhancers Esophagus oesophagus
34 chr5:178196800-178197200 Enhancers Fetal Muscle Leg muscle
35 chr5:178197600-178198400 Enhancers Monocytes-CD14+_RO01746 blood
36 chr5:178198400-178202800 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr5:178199400-178199600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr5:178199400-178199600 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
39 chr5:178199600-178199800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr5:178199800-178200800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr5:178200600-178201000 Bivalent Enhancer HepG2 liver
42 chr5:178200800-178201000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:178201000-178201800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr5:178201800-178203000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr5:178202000-178202600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
46 chr5:178202800-178204400 Enhancers Monocytes-CD14+_RO01746 blood
47 chr5:178202800-178208400 Enhancers Primary monocytes fromperipheralblood blood
48 chr5:178203000-178203200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr5:178203000-178203400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr5:178203000-178206600 Enhancers Primary neutrophils fromperipheralblood blood

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