Variant report

Variant nsv604121
Chromosome Location chr6:88842154-88861698
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88841800-88842600 Enhancers Fetal Stomach stomach
2 chr6:88842000-88842400 Enhancers Lung lung
3 chr6:88842000-88843000 Enhancers Stomach Smooth Muscle stomach
4 chr6:88842200-88842800 Enhancers Duodenum Smooth Muscle Duodenum
5 chr6:88842200-88843000 Enhancers Colon Smooth Muscle Colon
6 chr6:88842200-88843200 Enhancers Rectal Smooth Muscle rectum
7 chr6:88842800-88846800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr6:88843000-88843400 Weak transcription Colon Smooth Muscle Colon
9 chr6:88843000-88853400 Weak transcription Stomach Smooth Muscle stomach
10 chr6:88843200-88843600 Weak transcription Rectal Smooth Muscle rectum
11 chr6:88843400-88847000 Enhancers Colon Smooth Muscle Colon
12 chr6:88843600-88844600 Enhancers Rectal Smooth Muscle rectum
13 chr6:88844200-88845200 Enhancers GM12878-XiMat blood
14 chr6:88844200-88847200 Enhancers Primary B cells from peripheral blood blood
15 chr6:88844600-88846800 Weak transcription Rectal Smooth Muscle rectum
16 chr6:88845200-88846200 Flanking Active TSS GM12878-XiMat blood
17 chr6:88845200-88846800 Enhancers Primary B cells from cord blood blood
18 chr6:88846200-88847000 Enhancers GM12878-XiMat blood
19 chr6:88846800-88847000 Enhancers Rectal Smooth Muscle rectum
20 chr6:88846800-88847400 Enhancers Duodenum Smooth Muscle Duodenum
21 chr6:88847000-88847400 Weak transcription Rectal Smooth Muscle rectum
22 chr6:88847000-88847800 Weak transcription Colon Smooth Muscle Colon
23 chr6:88847000-88850800 Weak transcription GM12878-XiMat blood
24 chr6:88847200-88850000 Weak transcription Primary B cells from peripheral blood blood
25 chr6:88847400-88847600 Enhancers Rectal Smooth Muscle rectum
26 chr6:88847600-88848200 Enhancers Pancreatic Islets Pancreatic Islet
27 chr6:88847600-88855800 Weak transcription Rectal Smooth Muscle rectum
28 chr6:88847800-88848000 Enhancers HUES48 Cell Line embryonic stem cell
29 chr6:88847800-88848200 Enhancers Stomach Mucosa stomach
30 chr6:88847800-88848400 Enhancers Colon Smooth Muscle Colon
31 chr6:88848000-88849800 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr6:88848400-88855000 Weak transcription Colon Smooth Muscle Colon
33 chr6:88849200-88851400 Weak transcription Fetal Brain Female brain
34 chr6:88849600-88851600 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr6:88849800-88850400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr6:88849800-88850600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr6:88849800-88851400 Enhancers Primary B cells from cord blood blood
38 chr6:88850000-88850400 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr6:88850000-88850600 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr6:88850000-88855600 Enhancers Primary B cells from peripheral blood blood
41 chr6:88850200-88850400 Enhancers H1 Cell Line embryonic stem cell
42 chr6:88850400-88851400 Weak transcription H1 Cell Line embryonic stem cell
43 chr6:88850400-88851600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr6:88850400-88852400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr6:88850600-88851000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr6:88850600-88859200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr6:88850800-88851200 Enhancers GM12878-XiMat blood
48 chr6:88851000-88852000 Enhancers HUES48 Cell Line embryonic stem cell
49 chr6:88851200-88852000 Enhancers HUES64 Cell Line embryonic stem cell
50 chr6:88851200-88852000 Enhancers iPS-15b Cell Line embryonic stem cell

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