Variant report

Variant	nsv611809
Chromosome Location	chr8:99925628-100093510
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3122)
CpG islands
(count:4888)
Chromatin interactive
region (count:209)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3122 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:100025752-100025948	K562	blood:	n/a	n/a
2	ARID3A	chr8:99979696-99979755	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:100058615-100058867	K562	blood:	n/a	n/a
4	ARID3A	chr8:100025358-100025487	K562	blood:	n/a	n/a
5	ARID3A	chr8:100046132-100046815	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:100046312-100046577	K562	blood:	n/a	n/a
7	ARID3A	chr8:100023747-100023947	K562	blood:	n/a	n/a
8	ARID3A	chr8:100010143-100010485	K562	blood:	n/a	n/a
9	ARID3A	chr8:100025256-100025507	HepG2	liver:	n/a	n/a
10	ARID3A	chr8:100038356-100038875	HepG2	liver:	n/a	n/a
11	ARID3A	chr8:99953361-99953710	HepG2	liver:	n/a	n/a
12	ATF1	chr8:100058613-100058861	K562	blood:	n/a	n/a
13	ATF1	chr8:99943657-99943981	K562	blood:	n/a	n/a
14	ATF1	chr8:99989189-99989309	K562	blood:	n/a	n/a
15	ATF1	chr8:99939428-99939464	K562	blood:	n/a	n/a
16	ATF2	chr8:100093166-100093626	GM12878	blood:	n/a	n/a
17	ATF2	chr8:99986670-99987066	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr8:100092901-100093701	GM12878	blood:	n/a	n/a
19	ATF2	chr8:99956232-99956831	GM12878	blood:	n/a	n/a
20	ATF2	chr8:100025069-100025608	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr8:100025121-100025659	GM12878	blood:	n/a	n/a
22	ATF2	chr8:100024655-100026274	GM12878	blood:	n/a	n/a
23	ATF3	chr8:99953212-99953610	A549	lung:	n/a	n/a
24	ATF3	chr8:100024993-100025682	A549	lung:	n/a	n/a
25	ATF3	chr8:100025143-100025741	A549	lung:	n/a	n/a
26	BACH1	chr8:99960325-99960638	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr8:99952263-99955172	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr8:99957290-99957855	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr8:99951944-99951982	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr8:99956255-99957045	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr8:99960886-99961005	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr8:99986624-99986995	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr8:99950930-99950997	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr8:100025132-100025563	H1-hESC	embryonic stem cell:	n/a	n/a
35	BATF	chr8:99934137-99934602	GM12878	blood:	n/a	chr8:99934227-99934236
36	BATF	chr8:100093290-100093609	GM12878	blood:	n/a	n/a
37	BATF	chr8:100093275-100093603	GM12878	blood:	n/a	n/a
38	BATF	chr8:99956234-99956577	GM12878	blood:	n/a	chr8:99956446-99956456
39	BATF	chr8:99956226-99956569	GM12878	blood:	n/a	chr8:99956446-99956456
40	BCL11A	chr8:100093229-100093561	GM12878	blood:	n/a	chr8:100093423-100093432
41	BCL3	chr8:100025069-100025722	A549	lung:	n/a	chr8:100025253-100025262 chr8:100025599-100025612 chr8:100025221-100025234 chr8:100025419-100025432 chr8:100025201-100025214 chr8:100025210-100025223
42	BCL3	chr8:99956558-99957010	A549	lung:	n/a	chr8:99956564-99956573
43	BCL3	chr8:100024662-100025922	A549	lung:	n/a	chr8:100025253-100025262 chr8:100025599-100025612 chr8:100024668-100024675 chr8:100024802-100024811 chr8:100025221-100025234 chr8:100025419-100025432 chr8:100025201-100025214 chr8:100025210-100025223
44	BCLAF1	chr8:99956273-99957057	GM12878	blood:	n/a	chr8:99956564-99956573
45	BCLAF1	chr8:99956252-99957038	GM12878	blood:	n/a	chr8:99956564-99956573
46	BCLAF1	chr8:100024836-100026154	GM12878	blood:	n/a	chr8:100025253-100025262 chr8:100025599-100025612 chr8:100025221-100025234 chr8:100025419-100025432 chr8:100025201-100025214 chr8:100025210-100025223
47	BCLAF1	chr8:99953084-99953720	GM12878	blood:	n/a	chr8:99953389-99953402
48	BCLAF1	chr8:99957183-99958023	GM12878	blood:	n/a	chr8:99957199-99957208 chr8:99957412-99957425 chr8:99957418-99957431
49	BCLAF1	chr8:100092916-100093613	GM12878	blood:	n/a	chr8:100093423-100093432
50	BCLAF1	chr8:100024708-100026259	GM12878	blood:	n/a	chr8:100025253-100025262 chr8:100025599-100025612 chr8:100024802-100024811 chr8:100025221-100025234 chr8:100025419-100025432 chr8:100025201-100025214 chr8:100025210-100025223

(count:4888 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:100025487-100025537	T-47D	breast:	n/a
2	chr8:99988676-99988726	SK-N-SH	brain:	n/a
3	chr8:100025364-100025414	HEEpiC	esophagus:	n/a
4	chr8:100025604-100025654	SAEC	small airway:	n/a
5	chr8:99985049-99985099	NT2-D1	testis:	n/a
6	chr8:99984680-99984730	HCF	heart:	n/a
7	chr8:99949391-99949441	HPAEpiC	pulmonary alveolar:	n/a
8	chr8:100025604-100025654	H1-hESC	embryonic stem cell:	embryo
9	chr8:100025487-100025537	T-47D	breast:	n/a
10	chr8:99988676-99988726	SK-N-SH	brain:	n/a
11	chr8:100025364-100025414	HEEpiC	esophagus:	n/a
12	chr8:100025604-100025654	SAEC	small airway:	n/a
13	chr8:99985049-99985099	NT2-D1	testis:	n/a
14	chr8:99984680-99984730	HCF	heart:	n/a
15	chr8:99949391-99949441	HPAEpiC	pulmonary alveolar:	n/a
16	chr8:100025604-100025654	H1-hESC	embryonic stem cell:	embryo
17	chr8:100025155-100025205	MCF-7	breast:	n/a
18	chr8:99961545-99961595	HRCEpiC	kidney:	n/a
19	chr8:99952217-99952267	BJ	skin:	n/a
20	chr8:99957607-99957657	LNCaP	prostate:	n/a
21	chr8:99950917-99950967	SKMC	muscle:	n/a
22	chr8:99961122-99961172	HMEC	breast:	n/a
23	chr8:99959602-99959652	AG04450	lung:	fetal
24	chr8:99952591-99952641	LNCaP	prostate:	n/a
25	chr8:99955563-99955613	RPTEC	kidney:	n/a
26	chr8:99961768-99961818	SAEC	small airway:	n/a
27	chr8:99954679-99954729	AG09309	skin:	n/a
28	chr8:99999681-99999731	ovcar-3	ovarian:	n/a
29	chr8:99962013-99962063	AG09309	skin:	n/a
30	chr8:99961545-99961595	HIPEpiC	eye:	n/a
31	chr8:99951696-99951746	NHBE	bronchial:	n/a
32	chr8:100025604-100025654	CMK	blood:	n/a
33	chr8:99961545-99961595	NHDF-neo	bronchial:	n/a
34	chr8:100025155-100025205	AG09309	skin:	n/a
35	chr8:100024881-100024931	BJ	skin:	n/a
36	chr8:99959723-99959773	Caco-2	colon:	n/a
37	chr8:99982385-99982435	HIPEpiC	eye:	n/a
38	chr8:100028166-100028216	GM19239	blood:	n/a
39	chr8:99963021-99963071	AG10803	skin:	n/a
40	chr8:99956751-99956801	NT2-D1	testis:	n/a
41	chr8:99956559-99956609	AG04449	skin:	fetal
42	chr8:99956559-99956609	PrEC	prostate:	n/a
43	chr8:99984534-99984584	RPTEC	kidney:	n/a
44	chr8:99960580-99960630	SAEC	small airway:	n/a
45	chr8:99961545-99961595	HL-60	blood:	n/a
46	chr8:99955989-99956039	MCF10A-Er-Src	breast:	n/a
47	chr8:99960843-99960893	AG09319	gingival:	n/a
48	chr8:99958470-99958520	BE2_C	brain:	n/a
49	chr8:99955610-99955660	AG04449	skin:	fetal
50	chr8:99951730-99951780	NHDF-neo	bronchial:	n/a

(count:209 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr8:99949821..99952393-chr8:99958605..99960379,2	K562	blood:
2	chr8:99952911..99954006-chr8:100009839..100011083,7	MCF-7	breast:
3	chr8:100024340..100026866-chr8:100052293..100056237,3	MCF-7	breast:
4	chr8:99714532..99716117-chr8:99964323..99966058,2	MCF-7	breast:
5	chr8:99836376..99837915-chr8:99938345..99940401,2	MCF-7	breast:
6	chr8:99962872..99965221-chr8:99992608..99995397,2	MCF-7	breast:
7	chr8:100011207..100013044-chr8:100013955..100016177,3	K562	blood:
8	chr8:99995141..99996042-chr8:100118104..100118628,2	MCF-7	breast:
9	chr8:100067262..100071049-chr8:100071737..100074698,3	MCF-7	breast:
10	chr6:41039705..41041770-chr8:100070630..100073111,2	MCF-7	breast:
11	chr8:99946409..99949543-chr8:99954979..99957552,3	K562	blood:
12	chr8:100050345..100052932-chr8:100053932..100056597,2	K562	blood:
13	chr8:99959441..99961550-chr8:99971989..99973976,2	K562	blood:
14	chr8:99713408..99715331-chr8:99956897..99958843,2	MCF-7	breast:
15	chr8:99922248..99926179-chr8:99930900..99934447,3	MCF-7	breast:
16	chr8:99989078..99990727-chr8:99991007..99992543,2	MCF-7	breast:
17	chr8:99933065..99935408-chr8:99936825..99939811,2	MCF-7	breast:
18	chr8:100000682..100002695-chr8:100024003..100026318,2	MCF-7	breast:
19	chr8:99677331..99680175-chr8:100027131..100030033,2	K562	blood:
20	chr8:99910044..99913955-chr8:99926484..99929413,3	K562	blood:
21	chr8:100020387..100022270-chr8:100223332..100224852,2	MCF-7	breast:
22	chr8:100008104..100010992-chr8:100011648..100013634,2	MCF-7	breast:
23	chr8:100023461..100028430-chr8:100035626..100039715,7	MCF-7	breast:
24	chr8:99999501..100001966-chr8:100003964..100006558,3	K562	blood:
25	chr8:100034595..100037008-chr8:100041968..100045380,3	MCF-7	breast:
26	chr8:99935777..99938346-chr8:99942242..99944176,3	K562	blood:
27	chr8:99835536..99838329-chr8:99956256..99958052,2	MCF-7	breast:
28	chr8:100025833..100028756-chr8:100100624..100103335,2	MCF-7	breast:
29	chr8:99965681..99968140-chr8:100024075..100026959,2	MCF-7	breast:
30	chr8:99971192..99972768-chr8:100008713..100010422,2	MCF-7	breast:
31	chr8:100009588..100012990-chr8:100013654..100017766,5	K562	blood:
32	chr8:99717618..99718408-chr8:100009817..100010611,5	MCF-7	breast:
33	chr8:99999797..100001966-chr8:100003964..100007151,3	K562	blood:
34	chr15:66161556..66162059-chr8:100025171..100026075,2	HCT-116	colon:
35	chr8:99999797..100001966-chr8:100003964..100007151,3	K562	blood:
36	chr8:100030902..100033864-chr8:100036860..100038785,2	MCF-7	breast:
37	chr8:99959441..99961550-chr8:99971989..99973976,2	K562	blood:
38	chr8:99942235..99943803-chr8:99945712..99947725,2	K562	blood:
39	chr8:100025901..100029663-chr8:100033487..100035486,3	K562	blood:
40	chr8:99836684..99839127-chr8:99955180..99958109,2	K562	blood:
41	chr8:99992779..99996058-chr8:100005718..100009836,4	MCF-7	breast:
42	chr8:99956515..99958298-chr8:99978537..99981099,3	K562	blood:
43	chr8:100024437..100026977-chr8:100039956..100042496,2	MCF-7	breast:
44	chr8:99955175..99958334-chr8:99977797..99982110,4	K562	blood:
45	chr8:99929807..99931617-chr8:99933666..99936141,2	MCF-7	breast:
46	chr8:99901798..99904036-chr8:99961157..99963131,2	K562	blood:
47	chr8:100009588..100012990-chr8:100013654..100017766,5	K562	blood:
48	chr8:99952911..99954006-chr8:100009839..100011083,7	MCF-7	breast:
49	chr8:99956762..99958304-chr8:100013613..100016438,2	K562	blood:
50	chr8:99969800..99972098-chr8:99972390..99974582,2	K562	blood:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OSR2-1	chr8:99977692-99977735	ENSG00000229625
2	lnc-OSR2-3	chr8:99956631-99957051	NONHSAT127938
3	lnc-VPS13B-1	chr8:100014060-100015451	NONHSAT127942
4	lnc-STK3-5	chr8:100020741-100021457	l_3657_chr8:100017408-100021457_testes
5	lnc-OSR2-3	chr8:99958259-99958530	NONHSAT127938
6	lnc-STK3-2	chr8:100025097-100025272	ENSG00000253948.1
7	lnc-OSR2-4	chr8:99955823-99956326	ENSG00000271930.1
8	lnc-NIPAL2-7	chr8:99933461-99933778	NONHSAT127937
9	lnc-NIPAL2-5	chr8:99954606-99954873	NONHSAT127935
10	lnc-STK3-5	chr8:100017409-100018868	l_3657_chr8:100017408-100021457_testes
11	lnc-STK3-2	chr8:100008558-100009194	NONHSAT127943
12	lnc-OSR2-1	chr8:99980150-99980512	ENSG00000229625
13	lnc-STK3-5	chr8:100018891-100019738	l_3657_chr8:100017408-100021457_testes
14	lnc-OSR2-1	chr8:99973656-99973712	ENSG00000229625
15	lnc-STK3-2	chr8:100025097-100025462	NONHSAT127943
16	lnc-VPS13B-1	chr8:100008217-100013862	NONHSAT127942
17	lnc-STK3-2	chr8:100008991-100009194	ENSG00000253948.1

No data

Variant related genes	Relation type
ENSG00000263842	TF binding region
STK3	TF binding region
VPS13B	TF binding region
ENSG00000229625	TF binding region
ENSG00000253948	TF binding region
ENSG00000253180	TF binding region
RN7SKP85	TF binding region
OSR2	TF binding region
ENSG00000271930	TF binding region
ENSG00000263842	CpG island
STK3	CpG island
VPS13B	CpG island
ENSG00000229625	CpG island
ENSG00000253948	CpG island
ENSG00000253180	CpG island
RN7SKP85	CpG island
OSR2	CpG island
ENSG00000271930	CpG island
ENSG00000253948	chromatin interactions
ENSG00000103769	chromatin interactions
ENSG00000188643	chromatin interactions
ENSG00000124596	chromatin interactions
ENSG00000263842	chromatin interactions
ENSG00000164920	chromatin interactions
ENSG00000253180	chromatin interactions
ENSG00000164919	chromatin interactions
ENSG00000140157	chromatin interactions
ENSG00000132549	chromatin interactions
ENSG00000089157	chromatin interactions
ENSG00000223281	chromatin interactions
ENSG00000271930	chromatin interactions
ENSG00000001167	chromatin interactions
ENSG00000164924	chromatin interactions
ENSG00000104361	chromatin interactions
ENSG00000203865	chromatin interactions
ENSG00000229625	chromatin interactions
ENSG00000104375	chromatin interactions

Extended variants
information (count: 5452 )
Associated
traits (count: 113 )

Variant overlapped rSNPs/rCNVs (count:5452 , 50 per page) page: 1 2 3 4 5 6 7 ... 110

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2922068	chr8:99925628-99925629	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs532183640	chr8:99925658-99925659	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs147976769	chr8:99925707-99925708	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs188617217	chr8:99925789-99925790	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs112301047	chr8:99925866-99925867	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs529099203	chr8:99925870-99925871	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs577666928	chr8:99925884-99925885	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs191873557	chr8:99925890-99925891	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs569093673	chr8:99926025-99926026	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs201133232	chr8:99926033-99926034	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs7829389	chr8:99926077-99926078	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs571354600	chr8:99926085-99926086	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs112330558	chr8:99926283-99926284	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548191376	chr8:99926343-99926344	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs141793683	chr8:99926352-99926353	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs34088872	chr8:99926389-99926390	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs548060050	chr8:99926510-99926511	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs567986564	chr8:99926546-99926547	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs184260328	chr8:99926555-99926556	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs535687295	chr8:99926563-99926564	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs530627355	chr8:99926665-99926666	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs556009399	chr8:99926683-99926684	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371499444	chr8:99926690-99926691	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs34753292	chr8:99926691-99926692	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs61315962	chr8:99926718-99926719	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs201799011	chr8:99926720-99926721	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs67899539	chr8:99926721-99926722	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs2922069	chr8:99926722-99926723	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs544196855	chr8:99926724-99926725	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs72032744	chr8:99926728-99926729	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs557691943	chr8:99926753-99926754	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs75922799	chr8:99926761-99926762	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs188940559	chr8:99926794-99926795	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs560399178	chr8:99926823-99926824	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369692173	chr8:99926873-99926874	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs373515695	chr8:99926876-99926877	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs542487002	chr8:99926902-99926903	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs562801359	chr8:99927076-99927077	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs531680019	chr8:99927126-99927127	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs551708617	chr8:99927169-99927170	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs571212280	chr8:99927226-99927227	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs574394288	chr8:99927235-99927236	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs113126207	chr8:99927238-99927239	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs149708350	chr8:99927267-99927268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs547477799	chr8:99927284-99927285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs181748021	chr8:99927305-99927306	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs187199215	chr8:99927395-99927396	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs555729406	chr8:99927497-99927498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs569523224	chr8:99927547-99927548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs190571036	chr8:99927550-99927551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:113)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16461302	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	17260012	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Colorectal cancer	19455253	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21611746	CNVD
Prostate cancer	22341455	CNVD
Renal cell carcinoma	21215367	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cohen syndrome	20461111	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD

Chromatin state (count:4442 , 50 per page) page: 1 2 3 4 5 6 7 ... 89

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:99918800-99926400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:99924400-99927200	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr8:99924600-99925800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr8:99924600-99925800	Enhancers	A549	lung
5	chr8:99924800-99926800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr8:99924800-99926800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr8:99925000-99925800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr8:99925000-99925800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr8:99925000-99925800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr8:99925000-99926800	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr8:99925000-99926800	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr8:99925000-99927000	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr8:99925200-99926400	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr8:99925400-99925800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:99925400-99927200	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr8:99925800-99926000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chr8:99925800-99926000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr8:99925800-99927200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr8:99925800-99935800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr8:99926400-99926600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr8:99926400-99927200	Enhancers	HUES6 Cell Line	embryonic stem cell
22	chr8:99926800-99927200	Enhancers	H1 Cell Line	embryonic stem cell
23	chr8:99926800-99927200	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr8:99926800-99927400	Enhancers	iPS-15b Cell Line	embryonic stem cell
25	chr8:99926800-99927400	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr8:99927000-99927200	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr8:99927200-99942000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr8:99930400-99931800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr8:99931800-99936200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr8:99932000-99933200	Enhancers	Fetal Muscle Leg	muscle
31	chr8:99932200-99933000	Enhancers	HSMM	muscle
32	chr8:99932400-99933000	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr8:99932400-99933000	Enhancers	NH-A	brain
34	chr8:99932400-99933400	Enhancers	HSMMtube	muscle
35	chr8:99932600-99932800	Enhancers	Ovary	ovary
36	chr8:99932600-99933000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
37	chr8:99932800-99935800	Weak transcription	Ovary	ovary
38	chr8:99933000-99933200	Enhancers	Fetal Muscle Trunk	muscle
39	chr8:99933200-99938000	Weak transcription	Fetal Muscle Leg	muscle
40	chr8:99933200-99939000	Weak transcription	Fetal Muscle Trunk	muscle
41	chr8:99933400-99934600	Enhancers	GM12878-XiMat	blood
42	chr8:99934200-99935000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr8:99934400-99934800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr8:99934400-99934800	Enhancers	NHEK	skin
45	chr8:99934400-99935000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr8:99934800-99938800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr8:99934800-99938800	Weak transcription	NHEK	skin
48	chr8:99935000-99938800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr8:99935000-99939000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr8:99935600-99939800	Enhancers	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links