Variant report

Variant	nsv613207
Chromosome Location	chr9:6567841-6676953
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2092)
CpG islands
(count:367)
Chromatin interactive
region (count:43)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2092 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:6585226-6585461	K562	blood:	n/a	n/a
2	ARID3A	chr9:6585150-6585539	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:6673778-6673994	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:6667619-6667991	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:6590416-6591246	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:6645695-6646211	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:6641775-6641951	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:6568252-6568419	K562	blood:	n/a	n/a
9	ARID3A	chr9:6667709-6667966	K562	blood:	n/a	n/a
10	ARID3A	chr9:6664541-6665413	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:6592072-6592556	HepG2	liver:	n/a	n/a
12	ATF1	chr9:6594559-6594926	K562	blood:	n/a	n/a
13	ATF2	chr9:6605130-6605645	GM12878	blood:	n/a	n/a
14	ATF2	chr9:6654912-6655463	GM12878	blood:	n/a	n/a
15	ATF2	chr9:6630782-6631440	GM12878	blood:	n/a	n/a
16	ATF2	chr9:6673244-6673922	GM12878	blood:	n/a	n/a
17	ATF2	chr9:6632332-6633189	GM12878	blood:	n/a	n/a
18	ATF2	chr9:6598244-6598868	GM12878	blood:	n/a	n/a
19	ATF2	chr9:6620437-6621001	GM12878	blood:	n/a	n/a
20	ATF2	chr9:6575185-6575710	GM12878	blood:	n/a	n/a
21	ATF2	chr9:6654995-6655416	GM12878	blood:	n/a	n/a
22	ATF2	chr9:6597976-6598892	GM12878	blood:	n/a	n/a
23	ATF3	chr9:6664294-6664873	A549	lung:	n/a	n/a
24	ATF3	chr9:6664488-6664934	A549	lung:	n/a	n/a
25	BACH1	chr9:6667638-6667964	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr9:6645623-6645968	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:6644871-6645230	H1-hESC	embryonic stem cell:	n/a	n/a
28	BATF	chr9:6592868-6593086	GM12878	blood:	n/a	n/a
29	BATF	chr9:6656332-6656632	GM12878	blood:	n/a	n/a
30	BATF	chr9:6630698-6631421	GM12878	blood:	n/a	chr9:6630833-6630842
31	BATF	chr9:6632442-6633016	GM12878	blood:	n/a	n/a
32	BATF	chr9:6598389-6598834	GM12878	blood:	n/a	chr9:6598659-6598670
33	BATF	chr9:6598357-6598887	GM12878	blood:	n/a	chr9:6598659-6598670
34	BATF	chr9:6655058-6655371	GM12878	blood:	n/a	n/a
35	BATF	chr9:6620458-6620655	GM12878	blood:	n/a	n/a
36	BCL11A	chr9:6605232-6605584	GM12878	blood:	n/a	n/a
37	BCL11A	chr9:6575318-6575518	GM12878	blood:	n/a	n/a
38	BCL11A	chr9:6605220-6605551	GM12878	blood:	n/a	n/a
39	BCL11A	chr9:6632584-6632927	GM12878	blood:	n/a	n/a
40	BCL11A	chr9:6598313-6598874	GM12878	blood:	n/a	n/a
41	BCL11A	chr9:6655034-6655412	GM12878	blood:	n/a	n/a
42	BCL11A	chr9:6673323-6673715	GM12878	blood:	n/a	n/a
43	BCL11A	chr9:6632471-6632972	GM12878	blood:	n/a	n/a
44	BCL11A	chr9:6598377-6598720	GM12878	blood:	n/a	n/a
45	BCL11A	chr9:6594611-6594793	GM12878	blood:	n/a	n/a
46	BCL11A	chr9:6673395-6673768	GM12878	blood:	n/a	n/a
47	BCL3	chr9:6632539-6633018	GM12878	blood:	n/a	n/a
48	BCL3	chr9:6598339-6598796	GM12878	blood:	n/a	n/a
49	BCL3	chr9:6664480-6665034	A549	lung:	n/a	n/a
50	BCL3	chr9:6575300-6575684	GM12878	blood:	n/a	n/a

(count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:6645736-6645786	A549	lung:	n/a
2	chr9:6645736-6645786	A549	lung:	n/a
3	chr9:6645736-6645786	HEK293	kidney:	embryo
4	chr9:6645686-6645736	ECC-1	luminal epithelium:	n/a
5	chr9:6644603-6644653	K562	blood:	n/a
6	chr9:6645686-6645736	HCM	heart:	n/a
7	chr9:6645468-6645518	NHBE	bronchial:	n/a
8	chr9:6646386-6646436	HCT-116	colon:	n/a
9	chr9:6646386-6646436	HEEpiC	esophagus:	n/a
10	chr9:6645736-6645786	PANC-1	pancreas:	n/a
11	chr9:6646386-6646436	HRE	kidney:	n/a
12	chr9:6645468-6645518	PFSK-1	brain:	n/a
13	chr9:6645468-6645518	NT2-D1	testis:	n/a
14	chr9:6645686-6645736	HRCEpiC	kidney:	n/a
15	chr9:6645468-6645518	NH-A	brain:	n/a
16	chr9:6645686-6645736	HCF	heart:	n/a
17	chr9:6645686-6645736	HCPEpiC	choroid plexus:	n/a
18	chr9:6645468-6645518	SK-N-SH	brain:	n/a
19	chr9:6645468-6645518	SK-N-MC	brain:	n/a
20	chr9:6645686-6645736	HMEC	breast:	n/a
21	chr9:6645686-6645736	H1-hESC	embryonic stem cell:	embryo
22	chr9:6645686-6645736	K562	blood:	n/a
23	chr9:6645686-6645736	RPTEC	kidney:	n/a
24	chr9:6644369-6644419	AG04449	skin:	fetal
25	chr9:6646386-6646436	PANC-1	pancreas:	n/a
26	chr9:6644369-6644419	HIPEpiC	eye:	n/a
27	chr9:6644603-6644653	HRPEpiC	eye:	n/a
28	chr9:6645736-6645786	HAEpiC	amniotic membrane:	n/a
29	chr9:6644369-6644419	Jurkat	blood:	n/a
30	chr9:6645736-6645786	HRE	kidney:	n/a
31	chr9:6644603-6644653	Hela-S3	cervix:	n/a
32	chr9:6644603-6644653	GM12891	blood:	n/a
33	chr9:6644603-6644653	CMK	blood:	n/a
34	chr9:6645686-6645736	CMK	blood:	n/a
35	chr9:6645468-6645518	HCT-116	colon:	n/a
36	chr9:6644603-6644653	HIPEpiC	eye:	n/a
37	chr9:6646386-6646436	GM12891	blood:	n/a
38	chr9:6646386-6646436	NHBE	bronchial:	n/a
39	chr9:6646386-6646436	HUVEC	blood vessel:	n/a
40	chr9:6645686-6645736	AG04450	lung:	fetal
41	chr9:6646386-6646436	U87	brain:	n/a
42	chr9:6645736-6645786	AG09309	skin:	n/a
43	chr9:6644369-6644419	GM12891	blood:	n/a
44	chr9:6645736-6645786	Jurkat	blood:	n/a
45	chr9:6646386-6646436	Hepatocyte	liver:	n/a
46	chr9:6644603-6644653	HUVEC	blood vessel:	n/a
47	chr9:6645736-6645786	PFSK-1	brain:	n/a
48	chr9:6646386-6646436	GM06990	blood:	n/a
49	chr9:6644603-6644653	ProgFib	skin:	n/a
50	chr9:6646386-6646436	RPTEC	kidney:	n/a

(count:43 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:6663029..6667664-chr9:6679639..6683357,9	MCF-7	breast:
2	chr9:6588736..6590830-chr9:6680231..6682699,2	MCF-7	breast:
3	chr9:6615911..6617907-chr9:6681150..6682978,2	MCF-7	breast:
4	chr9:6605288..6608151-chr9:6611363..6613701,3	K562	blood:
5	chr9:6627812..6629680-chr9:6632614..6635740,3	MCF-7	breast:
6	chr9:6623651..6625727-chr9:6679924..6681530,2	MCF-7	breast:
7	chr9:6652273..6654630-chr9:6673766..6675385,2	MCF-7	breast:
8	chr9:6656639..6659482-chr9:6662780..6664665,3	MCF-7	breast:
9	chr9:6585232..6587306-chr9:6664888..6666750,2	MCF-7	breast:
10	chr9:6672368..6674682-chr9:6676645..6678823,3	MCF-7	breast:
11	chr9:6411889..6413422-chr9:6565833..6568598,2	K562	blood:
12	chr9:6354241..6354767-chr9:6667295..6668097,2	K562	blood:
13	chr9:6354058..6354828-chr9:6567905..6568745,4	MCF-7	breast:
14	chr9:6641084..6643158-chr9:6652442..6654682,2	MCF-7	breast:
15	chr9:6654607..6656764-chr9:6663214..6664911,2	K562	blood:
16	chr9:6667615..6669315-chr9:6679006..6681464,2	K562	blood:
17	chr9:6665749..6668244-chr9:6673822..6675444,2	MCF-7	breast:
18	chr9:6639393..6643031-chr9:6644244..6646064,4	MCF-7	breast:
19	chr9:6640659..6642824-chr9:6643049..6645706,2	MCF-7	breast:
20	chr9:6585232..6587306-chr9:6664888..6666750,2	MCF-7	breast:
21	chr9:6584834..6585802-chr9:6667386..6668426,5	MCF-7	breast:
22	chr9:6654607..6656764-chr9:6663214..6664911,2	K562	blood:
23	chr9:6523722..6524445-chr9:6667595..6668159,2	K562	blood:
24	chr9:6570923..6573857-chr9:6574160..6576030,2	K562	blood:
25	chr9:6579960..6582259-chr9:6679731..6681701,2	MCF-7	breast:
26	chr9:6624229..6626158-chr9:6679853..6681433,2	MCF-7	breast:
27	chr9:6672368..6674682-chr9:6676645..6678823,3	MCF-7	breast:
28	chr9:6570923..6573857-chr9:6574160..6576030,2	K562	blood:
29	chr9:6643546..6649129-chr9:6652921..6657149,5	MCF-7	breast:
30	chr9:6593764..6596429-chr9:6597405..6599828,2	MCF-7	breast:
31	chr9:6354258..6354771-chr9:6567896..6568668,2	MCF-7	breast:
32	chr9:6605288..6608151-chr9:6611363..6613701,3	K562	blood:
33	chr9:6641084..6643158-chr9:6652442..6654682,2	MCF-7	breast:
34	chr9:6662765..6664429-chr9:6666367..6668579,2	MCF-7	breast:
35	chr9:6662765..6664429-chr9:6666367..6668579,2	MCF-7	breast:
36	chr9:6639721..6642651-chr9:6680043..6682884,2	MCF-7	breast:
37	chr9:6593764..6596429-chr9:6597405..6599828,2	MCF-7	breast:
38	chr9:6627812..6629680-chr9:6632614..6635740,3	MCF-7	breast:
39	chr9:6590828..6592705-chr9:6679350..6681430,2	MCF-7	breast:
40	chr9:6663663..6666675-chr9:6715678..6718421,3	MCF-7	breast:
41	chr9:6644301..6646741-chr9:6667847..6669482,2	MCF-7	breast:
42	chr9:6656639..6659482-chr9:6662780..6664665,3	MCF-7	breast:
43	chr9:6584834..6585802-chr9:6667386..6668426,5	MCF-7	breast:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDM4C-5	chr9:6669544-6669728	ENSG00000236924.1
2	lnc-UHRF2-5	chr9:6568844-6569360	NONHSAT130143
3	lnc-KDM4C-5	chr9:6645956-6646085	ENSG00000236924.1
4	lnc-KDM4C-14	chr9:6661291-6661345	NONHSAT130146
5	lnc-KDM4C-13	chr9:6662424-6662810	NONHSAT130148
6	lnc-KDM4C-12	chr9:6675284-6675614	NONHSAT130149
7	lnc-KDM4C-14	chr9:6661651-6661936	NONHSAT130147
8	lnc-KDM4C-14	chr9:6660407-6661044	NONHSAT130146
9	lnc-KDM4C-14	chr9:6661783-6661845	NONHSAT130146
10	lnc-KDM4C-13	chr9:6663156-6663366	NONHSAT130148
11	lnc-KDM4C-5	chr9:6670425-6670690	NONHSAT130145
12	lnc-KDM4C-5	chr9:6669544-6669728	NONHSAT130145
13	lnc-KDM4C-13	chr9:6663657-6663792	NONHSAT130148
14	lnc-KDM4C-5	chr9:6645882-6646085	NONHSAT130145
15	lnc-KDM4C-5	chr9:6670425-6670635	ENSG00000236924.1

No data

Variant related genes	Relation type
ENSG00000236924	TF binding region
ENSG00000237158	TF binding region
ENSG00000232946	TF binding region
RNF2P1	TF binding region
ENSG00000206147	TF binding region
ENSG00000229057	TF binding region
ENSG00000252110	TF binding region
RN7SL123P	TF binding region
GLDC	TF binding region
ENSG00000236924	CpG island
ENSG00000237158	CpG island
ENSG00000232946	CpG island
RNF2P1	CpG island
ENSG00000206147	CpG island
ENSG00000229057	CpG island
ENSG00000252110	CpG island
RN7SL123P	CpG island
GLDC	CpG island
ENSG00000236924	chromatin interactions
ENSG00000232946	chromatin interactions
ENSG00000178445	chromatin interactions
ENSG00000225489	chromatin interactions
ENSG00000147854	chromatin interactions

Extended variants
information (count: 6309 )
Associated
traits (count: 110 )

Variant overlapped rSNPs/rCNVs (count:6309 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7870809	chr9:6567841-6567842	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs530144713	chr9:6567845-6567846	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs141188250	chr9:6567858-6567859	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs563282026	chr9:6567895-6567896	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs527752018	chr9:6567898-6567899	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs36030536	chr9:6568004-6568005	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs191663828	chr9:6568029-6568030	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs571064401	chr9:6568038-6568039	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs377042335	chr9:6568061-6568062	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs538443388	chr9:6568070-6568071	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs10975647	chr9:6568102-6568103	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs7859893	chr9:6568116-6568117	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs536267203	chr9:6568132-6568133	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs554232510	chr9:6568162-6568163	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs558918334	chr9:6568190-6568191	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs145587460	chr9:6568191-6568192	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs182758094	chr9:6568196-6568197	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs78943998	chr9:6568221-6568222	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs145238173	chr9:6568240-6568241	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs577552853	chr9:6568248-6568249	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs186616154	chr9:6568293-6568294	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs563205208	chr9:6568294-6568295	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs575008123	chr9:6568317-6568318	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs374296258	chr9:6568370-6568371	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs191473335	chr9:6568380-6568381	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs34877988	chr9:6568410-6568411	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs77908417	chr9:6568461-6568462	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs185526136	chr9:6568496-6568497	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs190834734	chr9:6568567-6568568	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs201162220	chr9:6568597-6568598	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs147218239	chr9:6568604-6568605	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
32	rs368194412	chr9:6568617-6568618	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
33	rs564232006	chr9:6568619-6568620	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
34	rs140652542	chr9:6568621-6568622	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
35	rs192855266	chr9:6568654-6568655	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
36	rs550331705	chr9:6568662-6568663	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
37	rs569148290	chr9:6568672-6568673	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
38	rs536116449	chr9:6568715-6568716	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
39	rs548169436	chr9:6568731-6568732	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
40	rs566388851	chr9:6568779-6568780	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
41	rs185412180	chr9:6568797-6568798	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
42	rs149979728	chr9:6568803-6568804	Weak transcription Strong transcription Enhancers	TF binding region	3 gene(s)	Overlapped CNVs	n/a
43	rs576993101	chr9:6568852-6568853	Weak transcription Strong transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
44	rs538465072	chr9:6568868-6568869	Weak transcription Strong transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs145210659	chr9:6568908-6568909	Weak transcription Strong transcription Enhancers	TF binding region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs116836400	chr9:6569006-6569007	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
47	rs562894059	chr9:6569010-6569011	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
48	rs542112067	chr9:6569022-6569023	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
49	rs148723596	chr9:6569075-6569076	Weak transcription Strong transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
50	rs12346767	chr9:6569092-6569093	Weak transcription Strong transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:110)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Dyslexia	22102821	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ependymoma	20639864	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Schizophrenia	21346763	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1492 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:6532000-6570400	Strong transcription	Liver	Liver
2	chr9:6554600-6568600	Weak transcription	Fetal Intestine Small	intestine
3	chr9:6558600-6586600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr9:6558800-6580800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr9:6559200-6583400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr9:6559600-6568200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr9:6560200-6569400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr9:6560200-6572200	Weak transcription	GM12878-XiMat	blood
9	chr9:6561200-6591000	Weak transcription	Placenta	Placenta
10	chr9:6563400-6583000	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr9:6564400-6568000	Enhancers	Brain Hippocampus Middle	brain
12	chr9:6564600-6568000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr9:6564800-6568200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:6565400-6575200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr9:6565400-6586400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr9:6565600-6568200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr9:6565600-6569400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr9:6565600-6577000	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr9:6566400-6575400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
20	chr9:6566600-6579800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr9:6566800-6568000	Flanking Active TSS	NHDF-Ad	bronchial
22	chr9:6566800-6568200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr9:6566800-6568200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
24	chr9:6566800-6572800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
25	chr9:6567000-6568200	Enhancers	Brain Cingulate Gyrus	brain
26	chr9:6567000-6575400	Weak transcription	HUES64 Cell Line	embryonic stem cell
27	chr9:6567000-6581000	Weak transcription	HUES48 Cell Line	embryonic stem cell
28	chr9:6567200-6568200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr9:6567200-6568200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr9:6567200-6568400	Enhancers	Placenta Amnion	Placenta Amnion
31	chr9:6567200-6569200	Enhancers	HMEC	breast
32	chr9:6567400-6568200	Enhancers	Brain Substantia Nigra	brain
33	chr9:6567400-6568400	Enhancers	Brain Anterior Caudate	brain
34	chr9:6567400-6576800	Weak transcription	HepG2	liver
35	chr9:6567400-6579800	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr9:6567600-6568000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr9:6567600-6568200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr9:6567600-6568200	Enhancers	HSMM	muscle
39	chr9:6567600-6568400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr9:6567600-6568600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr9:6567600-6568600	Enhancers	Osteobl	bone
42	chr9:6567600-6569000	Enhancers	Hela-S3	cervix
43	chr9:6567600-6571400	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr9:6567600-6599600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
45	chr9:6567800-6568200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr9:6567800-6568400	Enhancers	NH-A	brain
47	chr9:6567800-6568600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr9:6567800-6568600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr9:6567800-6568600	Enhancers	A549	lung
50	chr9:6567800-6568600	Enhancers	HUVEC	blood vessel

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