Variant report

Variant	nsv817328
Chromosome Location	chr3:54250314-54380438
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:54356445-54356776	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:54256397-54256731	HepG2	liver:	n/a	n/a
3	BACH1	chr3:54270926-54270936	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr3:54356354-54356789	HepG2	liver:	n/a	n/a
5	BRCA1	chr3:54317620-54317820	Hela-S3	cervix:	n/a	n/a
6	BRCA1	chr3:54354169-54355072	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr3:54317498-54317873	Hela-S3	cervix:	n/a	chr3:54317680-54317691
8	CEBPB	chr3:54308584-54309121	Hela-S3	cervix:	n/a	n/a
9	CEBPB	chr3:54277947-54278033	Hela-S3	cervix:	n/a	chr3:54277950-54277961
10	CEBPB	chr3:54307860-54308147	HepG2	liver:	n/a	chr3:54307981-54307992
11	CEBPB	chr3:54277881-54278016	K562	blood:	n/a	chr3:54277950-54277961
12	CEBPB	chr3:54307895-54308111	K562	blood:	n/a	chr3:54307981-54307992
13	CEBPB	chr3:54356299-54356803	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr3:54306588-54306886	HepG2	liver:	n/a	n/a
15	CEBPB	chr3:54344314-54344539	A549	lung:	n/a	n/a
16	CEBPB	chr3:54358157-54358427	Hela-S3	cervix:	n/a	chr3:54358408-54358425 chr3:54358411-54358424
17	CEBPB	chr3:54297048-54297318	H1-hESC	embryonic stem cell:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
18	CEBPB	chr3:54365423-54365677	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr3:54328277-54328401	A549	lung:	n/a	chr3:54328323-54328335
20	CEBPB	chr3:54354540-54355061	HepG2	liver:	n/a	n/a
21	CEBPB	chr3:54296982-54297379	Hela-S3	cervix:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
22	CEBPB	chr3:54296996-54297350	HepG2	liver:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
23	CEBPB	chr3:54373707-54373874	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr3:54296943-54297269	A549	lung:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
25	CEBPB	chr3:54256460-54256825	A549	lung:	n/a	n/a
26	CEBPB	chr3:54354532-54355061	A549	lung:	n/a	n/a
27	CEBPB	chr3:54296998-54297349	IMR90	lung:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
28	CEBPB	chr3:54296987-54297352	A549	lung:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
29	CEBPB	chr3:54333341-54333589	H1-hESC	embryonic stem cell:	n/a	chr3:54333532-54333540
30	CEBPB	chr3:54277774-54278107	HepG2	liver:	n/a	chr3:54277950-54277961
31	CEBPB	chr3:54354127-54355202	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr3:54307821-54308154	Hela-S3	cervix:	n/a	chr3:54307981-54307992
33	CEBPB	chr3:54327764-54328017	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr3:54308849-54308991	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr3:54297007-54297360	K562	blood:	n/a	chr3:54297164-54297173 chr3:54297183-54297196 chr3:54297163-54297174 chr3:54297183-54297194 chr3:54297162-54297173
36	CHD2	chr3:54317612-54317766	Hela-S3	cervix:	n/a	n/a
37	CHD2	chr3:54354216-54354979	Hela-S3	cervix:	n/a	n/a
38	CTCF	chr3:54277640-54277790	GM12872	blood:	n/a	n/a
39	CTCF	chr3:54373686-54373924	MCF-7	breast:	n/a	n/a
40	CTCF	chr3:54373640-54373790	RPTEC	kidney:	n/a	n/a
41	CTCF	chr3:54277580-54277730	NHLF	lung:	n/a	n/a
42	CTCF	chr3:54354678-54354845	Hela-S3	cervix:	n/a	n/a
43	CTCF	chr3:54328360-54328510	A549	lung:	n/a	chr3:54328394-54328404
44	CTCF	chr3:54277640-54277790	AG10803	skin:	n/a	n/a
45	CTCF	chr3:54328320-54328470	Hela-S3	cervix:	n/a	chr3:54328394-54328404
46	CTCF	chr3:54373820-54373970	HCM	heart:	n/a	n/a
47	CTCF	chr3:54277640-54277790	HCFaa	heart:	n/a	n/a
48	CTCF	chr3:54328388-54328444	GM19238	blood:	n/a	chr3:54328394-54328404
49	CTCF	chr3:54328320-54328478	HepG2	liver:	n/a	chr3:54328394-54328404
50	CTCF	chr3:54277620-54277770	NHDF-neo	bronchial:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:54353131-54353181	BJ	skin:	n/a
2	chr3:54353131-54353181	BJ	skin:	n/a
3	chr3:54355910-54355960	SK-N-SH	brain:	n/a
4	chr3:54355910-54355960	AG09319	gingival:	n/a
5	chr3:54331304-54331354	HEK293	kidney:	embryo
6	chr3:54353131-54353181	A549	lung:	n/a
7	chr3:54353711-54353761	Hepatocyte	liver:	n/a
8	chr3:54353711-54353761	U87	brain:	n/a
9	chr3:54355910-54355960	Jurkat	blood:	n/a
10	chr3:54355910-54355960	Hepatocyte	liver:	n/a
11	chr3:54353131-54353181	AG09309	skin:	n/a
12	chr3:54355910-54355960	GM19239	blood:	n/a
13	chr3:54355910-54355960	A549	lung:	n/a
14	chr3:54331304-54331354	GM12878	blood:	n/a
15	chr3:54353131-54353181	HUVEC	blood vessel:	n/a
16	chr3:54353711-54353761	ProgFib	skin:	n/a
17	chr3:54353711-54353761	HAEpiC	amniotic membrane:	n/a
18	chr3:54331304-54331354	SAEC	small airway:	n/a
19	chr3:54331304-54331354	HIPEpiC	eye:	n/a
20	chr3:54331304-54331354	GM12892	blood:	n/a
21	chr3:54353131-54353181	NH-A	brain:	n/a
22	chr3:54353131-54353181	HIPEpiC	eye:	n/a
23	chr3:54355910-54355960	HEEpiC	esophagus:	n/a
24	chr3:54353711-54353761	NH-A	brain:	n/a
25	chr3:54331304-54331354	HCF	heart:	n/a
26	chr3:54353711-54353761	HepG2	liver:	n/a
27	chr3:54353711-54353761	Caco-2	colon:	n/a
28	chr3:54353131-54353181	GM19239	blood:	n/a
29	chr3:54331304-54331354	AG10803	skin:	n/a
30	chr3:54353711-54353761	HMEC	breast:	n/a
31	chr3:54355910-54355960	MCF10A-Er-Src	breast:	n/a
32	chr3:54331304-54331354	AG09309	skin:	n/a
33	chr3:54355910-54355960	ECC-1	luminal epithelium:	n/a
34	chr3:54355910-54355960	BJ	skin:	n/a
35	chr3:54353131-54353181	HMEC	breast:	n/a
36	chr3:54353131-54353181	LNCaP	prostate:	n/a
37	chr3:54331304-54331354	PrEC	prostate:	n/a
38	chr3:54353131-54353181	AG10803	skin:	n/a
39	chr3:54331304-54331354	HRE	kidney:	n/a
40	chr3:54353711-54353761	K562	blood:	n/a
41	chr3:54353711-54353761	HIPEpiC	eye:	n/a
42	chr3:54353711-54353761	SKMC	muscle:	n/a
43	chr3:54331304-54331354	GM19239	blood:	n/a
44	chr3:54353711-54353761	HRPEpiC	eye:	n/a
45	chr3:54355910-54355960	HCT-116	colon:	n/a
46	chr3:54331304-54331354	ProgFib	skin:	n/a
47	chr3:54353711-54353761	HCT-116	colon:	n/a
48	chr3:54353131-54353181	SKMC	muscle:	n/a
49	chr3:54331304-54331354	SK-N-MC	brain:	n/a
50	chr3:54331304-54331354	BE2_C	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:54371813..54373990-chr3:54376911..54378981,2	K562	blood:
2	chr1:16840017..16840562-chr3:54354368..54355169,2	Hela-S3	cervix:
3	chr3:54180383..54181251-chr3:54373358..54373893,2	MCF-7	breast:
4	chr1:91852589..91853107-chr3:54356271..54356793,2	MCF-7	breast:
5	chr3:54375117..54375902-chr3:54387751..54388811,4	MCF-7	breast:
6	chr3:54339706..54342583-chr3:54377955..54380864,2	MCF-7	breast:
7	chr3:54375381..54375990-chr3:54394183..54394906,2	MCF-7	breast:
8	chr3:54339706..54342583-chr3:54377955..54380864,2	MCF-7	breast:
9	chr3:54371813..54373990-chr3:54376911..54378981,2	K562	blood:
10	chr3:54180408..54181091-chr3:54372500..54373456,2	MCF-7	breast:
11	chr3:54375152..54375990-chr3:54394183..54395021,3	MCF-7	breast:
12	chr3:54364920..54367293-chr3:54368876..54371609,2	K562	blood:
13	chr3:54286387..54287180-chr8:129442741..129443555,2	MCF-7	breast:
14	chr3:54375027..54375990-chr3:54387842..54389644,8	MCF-7	breast:
15	chr3:54180345..54181406-chr3:54345179..54346094,3	MCF-7	breast:
16	chr3:54375174..54375975-chr3:54461350..54461870,2	MCF-7	breast:
17	chr3:54375027..54375647-chr3:54388254..54389644,4	MCF-7	breast:
18	chr3:54364920..54367293-chr3:54368876..54371609,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL17RB-2	chr3:54306801-54307195	NONHSAT090013
2	lnc-IL17RB-2	chr3:54354469-54354568	NONHSAT090013

Variant related genes	Relation type
CACNA2D3	TF binding region
CACNA2D3	CpG island

Extended variants
information (count: 5281 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:5281 , 50 per page) page: 1 2 3 4 5 6 7 ... 106

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528204547	chr3:54250316-54250317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs577350657	chr3:54250324-54250325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs545176862	chr3:54250326-54250327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs191125676	chr3:54250338-54250339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs76570224	chr3:54250344-54250345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs377398405	chr3:54250346-54250347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs147983020	chr3:54250362-54250363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs369424313	chr3:54250363-54250364	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs141609348	chr3:54250401-54250402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs9840489	chr3:54250489-54250490	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs78336011	chr3:54250522-54250523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs183267826	chr3:54250543-54250544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs575397847	chr3:54250551-54250552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs144692709	chr3:54250562-54250563	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs374013256	chr3:54250669-54250670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs138570774	chr3:54250699-54250700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs62252193	chr3:54250766-54250767	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs187625807	chr3:54250789-54250790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs78005645	chr3:54250792-54250793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs73841907	chr3:54250846-54250847	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs572814480	chr3:54250885-54250886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs112064136	chr3:54250937-54250938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs79166598	chr3:54250951-54250952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs141614188	chr3:54251012-54251013	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs575895010	chr3:54251033-54251034	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs544864703	chr3:54251038-54251039	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs116513449	chr3:54251046-54251047	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs533489788	chr3:54251088-54251089	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs547286315	chr3:54251092-54251093	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs34796906	chr3:54251113-54251114	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs11283625	chr3:54251172-54251173	Active TSS Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs529289857	chr3:54251186-54251187	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs146134168	chr3:54251189-54251190	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs61230579	chr3:54251202-54251203	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs569051562	chr3:54251208-54251209	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs536845695	chr3:54251223-54251224	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs550388990	chr3:54251226-54251227	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs192527447	chr3:54251229-54251230	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs539322267	chr3:54251240-54251241	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs113595303	chr3:54251280-54251281	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs553255632	chr3:54251296-54251297	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs572705547	chr3:54251300-54251301	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs139872275	chr3:54251351-54251352	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs77070258	chr3:54251385-54251386	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs570104900	chr3:54251400-54251401	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs149443467	chr3:54251503-54251504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs74484347	chr3:54251506-54251507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs549380072	chr3:54251642-54251643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs144814148	chr3:54251670-54251671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs570462468	chr3:54251674-54251675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD

Chromatin state (count:530 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:54247800-54254600	Weak transcription	Gastric	stomach
2	chr3:54249000-54251000	Weak transcription	Spleen	Spleen
3	chr3:54249200-54251000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr3:54249800-54260200	Weak transcription	Right Atrium	heart
5	chr3:54251000-54251400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr3:54251000-54251400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:54251000-54251400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr3:54251000-54251400	Enhancers	Spleen	Spleen
9	chr3:54251400-54252200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr3:54252200-54252400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr3:54252200-54252400	ZNF genes & repeats	Pancreas	Pancrea
12	chr3:54252400-54254600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr3:54252400-54265400	Weak transcription	Pancreas	Pancrea
14	chr3:54252400-54266200	Weak transcription	Esophagus	oesophagus
15	chr3:54252600-54254200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr3:54254600-54255000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr3:54254800-54255000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr3:54256200-54257400	Enhancers	A549	lung
19	chr3:54256400-54257600	Enhancers	Rectal Mucosa Donor 31	rectum
20	chr3:54259800-54260000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr3:54260000-54260200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
22	chr3:54260000-54260200	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr3:54260000-54260200	Enhancers	Skeletal Muscle Female	skeletal muscle
24	chr3:54260000-54260400	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr3:54260000-54260400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
26	chr3:54260000-54260400	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr3:54260000-54260400	Enhancers	Hela-S3	cervix
28	chr3:54260000-54260600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr3:54260000-54261000	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr3:54260200-54260800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr3:54260200-54260800	Enhancers	Right Atrium	heart
32	chr3:54260200-54262000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr3:54260200-54262600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr3:54260400-54265000	Weak transcription	Skeletal Muscle Male	skeletal muscle
35	chr3:54260400-54269400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr3:54260400-54271200	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr3:54260600-54260800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr3:54260800-54262600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr3:54260800-54266400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr3:54261000-54261200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr3:54261000-54262600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
42	chr3:54261600-54262600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr3:54262000-54262200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
44	chr3:54262200-54262600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
45	chr3:54262600-54263000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
46	chr3:54262600-54263000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr3:54262600-54263000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr3:54262600-54263000	Enhancers	iPS-20b Cell Line	embryonic stem cell
49	chr3:54262600-54263200	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr3:54262600-54263200	Enhancers	HUES64 Cell Line	embryonic stem cell

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