Variant report

Variant	nsv824631
Chromosome Location	chr1:152191386-152193520
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 392 )
Associated
traits (count: 120 )

Variant overlapped rSNPs/rCNVs (count:392 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201569096	chr1:152191401-152191402	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs145270019	chr1:152191403-152191404	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs142336181	chr1:152191404-152191405	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs148964009	chr1:152191408-152191409	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs559896603	chr1:152191419-152191420	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs138393626	chr1:152191421-152191422	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs200819476	chr1:152191424-152191425	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs112974969	chr1:152191433-152191434	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs142351738	chr1:152191436-152191437	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs41266132	chr1:152191437-152191438	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs374055600	chr1:152191442-152191443	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs144495868	chr1:152191450-152191451	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs145266060	chr1:152191460-152191461	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs201064839	chr1:152191461-152191462	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs548858056	chr1:152191462-152191463	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs115796801	chr1:152191464-152191465	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs376040395	chr1:152191466-152191467	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs551059466	chr1:152191467-152191468	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs150298716	chr1:152191469-152191470	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs75575379	chr1:152191471-152191472	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs139401356	chr1:152191472-152191473	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs74127894	chr1:152191473-152191474	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs147375651	chr1:152191475-152191476	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs143604066	chr1:152191476-152191477	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs370407108	chr1:152191477-152191478	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs373889491	chr1:152191480-152191481	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs140521585	chr1:152191482-152191483	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs144612692	chr1:152191484-152191485	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs564308462	chr1:152191489-152191490	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs577992422	chr1:152191490-152191491	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs368033140	chr1:152191495-152191496	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs142836430	chr1:152191498-152191499	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs141313202	chr1:152191502-152191503	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs143308650	chr1:152191506-152191507	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs201186522	chr1:152191508-152191509	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs146837788	chr1:152191515-152191516	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs370756515	chr1:152191518-152191519	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs375566480	chr1:152191519-152191520	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs186602563	chr1:152191526-152191527	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs147096675	chr1:152191534-152191535	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs202201629	chr1:152191542-152191543	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs150471229	chr1:152191546-152191547	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs370807691	chr1:152191548-152191549	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs200748489	chr1:152191554-152191555	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs148822488	chr1:152191559-152191560	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs376757850	chr1:152191560-152191561	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs148133879	chr1:152191564-152191565	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs141928962	chr1:152191565-152191566	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs567328450	chr1:152191568-152191569	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs150644326	chr1:152191570-152191571	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:120)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	21129771	CNVD
Non-small cell lung cancer	21385341	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Ewing''s sarcoma	21437220	CNVD
Liposarcoma	21253554	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Breast cancer	20409316	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21183584	CNVD
Multiple myeloma	16461302	CNVD
Lung cancer	18438408	CNVD
Rett syndrome	21593744	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Systemic lupus erythematosus	21956041	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Non-small cell lung cancer	21829676	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	17899364	CNVD
Bladder cancer	19088036	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21611746	CNVD
Retinoblastoma	19183342	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Ewing''s sarcoma	17952124	CNVD
Osteosarcoma	17242211	CNVD
Ovarian cancer	17242211	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Schizophrenia	18990708	CNVD
Sudden cardiac death	19188705	CNVD
Plasma-cell dyscrasia	16705089	CNVD
Myeloma	17024118	CNVD
Cancer	17060936	CNVD
Multiple myeloma	16616336	CNVD
Type 2 diabetes	19141583	CNVD
Chordoma	18071362	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	18703704	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Testicular germ cell tumor	18059402	CNVD
Trisomy 5 syndrome	21098271	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Gastrointestinal cancer	16790693	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Glioblastoma multiforme	21138945	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:152191400-152191600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:152191400-152193600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:152191600-152197200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:152192600-152197800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr1:152192800-152193000	ZNF genes & repeats	Esophagus	oesophagus

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