Variant report

Variant	nsv827391
Chromosome Location	chr15:76626571-76636327
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:963)
CpG islands
(count:2445)
Chromatin interactive
region (count:39)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:963 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:76627805-76627995	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:76628723-76629103	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:76629140-76629363	K562	blood:	n/a	n/a
4	ATF1	chr15:76628649-76629872	K562	blood:	n/a	chr15:76629073-76629087
5	ATF2	chr15:76628636-76629414	H1-hESC	embryonic stem cell:	n/a	chr15:76629073-76629087
6	ATF2	chr15:76628653-76629310	GM12878	blood:	n/a	chr15:76629073-76629087
7	ATF2	chr15:76628607-76629258	H1-hESC	embryonic stem cell:	n/a	chr15:76629073-76629087
8	ATF3	chr15:76628194-76629020	A549	lung:	n/a	chr15:76628795-76628806 chr15:76628793-76628806 chr15:76628209-76628218 chr15:76628791-76628805 chr15:76628794-76628804 chr15:76628795-76628806
9	ATF3	chr15:76628702-76628895	HepG2	liver:	n/a	chr15:76628795-76628806 chr15:76628793-76628806 chr15:76628791-76628805 chr15:76628794-76628804 chr15:76628795-76628806
10	ATF3	chr15:76628409-76629269	K562	blood:	n/a	chr15:76628795-76628806 chr15:76628793-76628806 chr15:76628791-76628805 chr15:76628794-76628804 chr15:76629077-76629084 chr15:76629077-76629085 chr15:76629028-76629048 chr15:76629073-76629084 chr15:76629073-76629088 chr15:76628795-76628806
11	BACH1	chr15:76629934-76630251	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr15:76635138-76635241	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr15:76634034-76634230	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr15:76627575-76627714	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr15:76633060-76633168	H1-hESC	embryonic stem cell:	n/a	n/a
16	BCL3	chr15:76628292-76629316	A549	lung:	n/a	n/a
17	BCL3	chr15:76625999-76626831	A549	lung:	n/a	n/a
18	BHLHE40	chr15:76632473-76632973	GM12878	blood:	n/a	n/a
19	BHLHE40	chr15:76626294-76626631	K562	blood:	n/a	n/a
20	BHLHE40	chr15:76628596-76629278	HepG2	liver:	n/a	chr15:76629050-76629066
21	BHLHE40	chr15:76629583-76630768	K562	blood:	n/a	chr15:76630343-76630359 chr15:76630510-76630526 chr15:76630344-76630360
22	BHLHE40	chr15:76628143-76629345	K562	blood:	n/a	chr15:76629050-76629066
23	BHLHE40	chr15:76629704-76630730	HepG2	liver:	n/a	chr15:76630343-76630359 chr15:76630510-76630526 chr15:76630344-76630360
24	BRCA1	chr15:76627994-76628184	GM12878	blood:	n/a	n/a
25	BRCA1	chr15:76628673-76628873	HepG2	liver:	n/a	n/a
26	BRCA1	chr15:76628187-76629527	Hela-S3	cervix:	n/a	n/a
27	BRCA1	chr15:76629061-76629101	GM12878	blood:	n/a	n/a
28	BRCA1	chr15:76628973-76629158	H1-hESC	embryonic stem cell:	n/a	n/a
29	BRCA1	chr15:76630064-76630181	HepG2	liver:	n/a	n/a
30	CBX3	chr15:76629531-76630339	K562	blood:	n/a	n/a
31	CBX3	chr15:76630465-76631197	K562	blood:	n/a	n/a
32	CBX3	chr15:76628655-76629340	K562	blood:	n/a	n/a
33	CCNT2	chr15:76628112-76631050	K562	blood:	n/a	chr15:76628209-76628218 chr15:76629304-76629313 chr15:76630348-76630357 chr15:76629900-76629909
34	CCNT2	chr15:76632649-76632846	K562	blood:	n/a	n/a
35	CCNT2	chr15:76634873-76635129	K562	blood:	n/a	chr15:76634952-76634961
36	CEBPB	chr15:76628501-76628969	MCF-7	breast:	n/a	n/a
37	CEBPB	chr15:76628613-76629080	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr15:76628405-76629809	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr15:76628612-76629678	IMR90	lung:	n/a	n/a
40	CEBPB	chr15:76626251-76626857	HepG2	liver:	n/a	n/a
41	CEBPB	chr15:76628553-76628946	A549	lung:	n/a	n/a
42	CEBPB	chr15:76628326-76629665	A549	lung:	n/a	n/a
43	CEBPB	chr15:76628593-76629179	K562	blood:	n/a	n/a
44	CEBPB	chr15:76628592-76628912	HepG2	liver:	n/a	n/a
45	CEBPB	chr15:76628589-76629675	A549	lung:	n/a	n/a
46	CEBPB	chr15:76627164-76627171	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr15:76628689-76628926	ECC-1	luminal epithelium:	n/a	n/a
48	CEBPB	chr15:76628415-76629797	K562	blood:	n/a	n/a
49	CEBPB	chr15:76628592-76629369	ECC-1	luminal epithelium:	n/a	n/a
50	CEBPB	chr15:76628387-76629228	HepG2	liver:	n/a	n/a

(count:2445 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:76628154-76628204	AG04449	skin:	fetal
2	chr15:76633364-76633414	CMK	blood:	n/a
3	chr15:76634454-76634504	SK-N-SH	brain:	n/a
4	chr15:76633817-76633867	SK-N-SH	brain:	n/a
5	chr15:76629104-76629154	MCF-7	breast:	n/a
6	chr15:76628154-76628204	AG04449	skin:	fetal
7	chr15:76633364-76633414	CMK	blood:	n/a
8	chr15:76634454-76634504	SK-N-SH	brain:	n/a
9	chr15:76633817-76633867	SK-N-SH	brain:	n/a
10	chr15:76629104-76629154	MCF-7	breast:	n/a
11	chr15:76627788-76627838	SAEC	small airway:	n/a
12	chr15:76630260-76630310	HNPCEpiC	eye:	n/a
13	chr15:76629104-76629154	AG09319	gingival:	n/a
14	chr15:76631569-76631619	NB4	blood:	n/a
15	chr15:76630209-76630259	AG04449	skin:	fetal
16	chr15:76630095-76630145	RPTEC	kidney:	n/a
17	chr15:76627666-76627716	GM19239	blood:	n/a
18	chr15:76635357-76635407	HUVEC	blood vessel:	n/a
19	chr15:76633817-76633867	BJ	skin:	n/a
20	chr15:76635638-76635688	MCF-7	breast:	n/a
21	chr15:76627788-76627838	HPAEpiC	pulmonary alveolar:	n/a
22	chr15:76634843-76634893	NHBE	bronchial:	n/a
23	chr15:76633086-76633136	HAEpiC	amniotic membrane:	n/a
24	chr15:76628424-76628474	GM12891	blood:	n/a
25	chr15:76635638-76635688	HRE	kidney:	n/a
26	chr15:76630260-76630310	HPAEpiC	pulmonary alveolar:	n/a
27	chr15:76633627-76633677	GM19239	blood:	n/a
28	chr15:76627666-76627716	GM12878	blood:	n/a
29	chr15:76627594-76627644	AoSMC	blood vessel:	n/a
30	chr15:76633981-76634031	K562	blood:	n/a
31	chr15:76634380-76634430	SK-N-SH_RA	brain:	n/a
32	chr15:76634454-76634504	Jurkat	blood:	n/a
33	chr15:76635953-76636003	BE2_C	brain:	n/a
34	chr15:76630514-76630564	HRPEpiC	eye:	n/a
35	chr15:76630514-76630564	T-47D	breast:	n/a
36	chr15:76630095-76630145	HUVEC	blood vessel:	n/a
37	chr15:76633627-76633677	IMR90	lung:	fetal
38	chr15:76630660-76630710	ECC-1	luminal epithelium:	n/a
39	chr15:76632287-76632337	NH-A	brain:	n/a
40	chr15:76632420-76632470	AG10803	skin:	n/a
41	chr15:76630660-76630710	NH-A	brain:	n/a
42	chr15:76635357-76635407	BE2_C	brain:	n/a
43	chr15:76627666-76627716	HRCEpiC	kidney:	n/a
44	chr15:76630514-76630564	NT2-D1	testis:	n/a
45	chr15:76628531-76628581	PANC-1	pancreas:	n/a
46	chr15:76630260-76630310	Jurkat	blood:	n/a
47	chr15:76631569-76631619	GM06990	blood:	n/a
48	chr15:76632292-76632342	NH-A	brain:	n/a
49	chr15:76630095-76630145	ProgFib	skin:	n/a
50	chr15:76635638-76635688	ECC-1	luminal epithelium:	n/a

(count:39 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:76627980..76632315-chr15:76633215..76636196,5	MCF-7	breast:
2	chr15:76597896..76600825-chr15:76626656..76628546,2	MCF-7	breast:
3	chr15:76627980..76632315-chr15:76633215..76636196,5	MCF-7	breast:
4	chr15:76482702..76486394-chr15:76633656..76636389,3	K562	blood:
5	chr1:112646202..112647038-chr15:76625778..76626625,2	MCF-7	breast:
6	chr15:76617028..76618858-chr15:76625946..76627693,2	MCF-7	breast:
7	chr15:76600511..76607655-chr15:76613791..76629933,32	MCF-7	breast:
8	chr15:76482924..76483751-chr15:76625816..76626899,5	MCF-7	breast:
9	chr15:76601310..76610583-chr15:76618699..76634643,40	K562	blood:
10	chr15:76586734..76589503-chr15:76636258..76638931,2	K562	blood:
11	chr15:76440174..76440912-chr15:76625983..76626603,2	MCF-7	breast:
12	chr15:76583048..76585196-chr15:76627041..76629277,2	MCF-7	breast:
13	chr15:76482689..76486583-chr15:76628039..76631365,3	K562	blood:
14	chr15:76527288..76528019-chr15:76626012..76626713,2	MCF-7	breast:
15	chr15:76482740..76483457-chr15:76626133..76626814,2	MCF-7	breast:
16	chr15:76591467..76593995-chr15:76626637..76628156,2	K562	blood:
17	chr15:76628671..76632944-chr15:76633969..76642252,10	MCF-7	breast:
18	chr15:76628671..76632944-chr15:76633969..76642252,10	MCF-7	breast:
19	chr15:76488844..76490782-chr15:76625306..76628294,2	K562	blood:
20	chr15:76630323..76632934-chr15:77355490..77357171,2	K562	blood:
21	chr15:76537469..76539301-chr15:76627220..76628943,2	MCF-7	breast:
22	chr10:75541358..75542179-chr15:76629650..76630534,2	NB4	blood:
23	chr1:173446351..173447261-chr15:76628469..76629107,2	Hela-S3	cervix:
24	chr15:76574110..76576498-chr15:76629872..76632197,2	K562	blood:
25	chr15:76577359..76578026-chr15:76626000..76626679,2	MCF-7	breast:
26	chr15:76591467..76593414-chr15:76626364..76628156,2	K562	blood:
27	chr15:76624512..76627161-chr15:76627320..76629077,4	MCF-7	breast:
28	chr15:76628537..76629208-chr3:43731945..43732563,2	NB4	blood:
29	chr15:76483216..76483808-chr15:76625887..76626857,3	K562	blood:
30	chr15:76628338..76628972-chr16:3333283..3333855,2	Hela-S3	cervix:
31	chr15:76628182..76629017-chr6:109415644..109416177,2	Hela-S3	cervix:
32	chr15:76628312..76628814-chr22:43010507..43011050,2	HCT-116	colon:
33	chr15:76598820..76601362-chr15:76625646..76628540,2	K562	blood:
34	chr15:76527312..76528369-chr15:76625920..76626784,4	MCF-7	breast:
35	chr15:76481529..76484202-chr15:76633877..76636476,2	K562	blood:
36	chr15:76630618..76633246-chr15:76671829..76673785,2	K562	blood:
37	chr15:76602419..76607116-chr15:76626572..76631104,6	MCF-7	breast:
38	chr15:76536052..76538600-chr15:76625414..76627527,2	MCF-7	breast:
39	chr15:76601574..76614388-chr15:76623703..76634730,38	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ISL2-1	chr15:76635983-76636706	ENSG00000270036.1

No data

Variant related genes	Relation type
ENSG00000270036	TF binding region
ISL2	TF binding region
ENSG00000259514	TF binding region
ENSG00000270036	CpG island
ISL2	CpG island
ENSG00000259514	CpG island
ENSG00000270036	chromatin interactions
ENSG00000172586	chromatin interactions
ENSG00000100227	chromatin interactions
ENSG00000117592	chromatin interactions
ENSG00000259514	chromatin interactions
ENSG00000159556	chromatin interactions
ENSG00000160746	chromatin interactions
ENSG00000140374	chromatin interactions
ENSG00000006194	chromatin interactions
ENSG00000169758	chromatin interactions
ENSG00000080546	chromatin interactions
ENSG00000011198	chromatin interactions

Extended variants
information (count: 367 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs575137596	chr15:76626576-76626577	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs117462956	chr15:76626596-76626597	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs140182715	chr15:76626653-76626654	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs113661735	chr15:76626803-76626804	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs563641548	chr15:76626833-76626834	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs556956968	chr15:76626921-76626922	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs577290622	chr15:76626986-76626987	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs150334870	chr15:76627006-76627007	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs539395320	chr15:76627012-76627013	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs573026223	chr15:76627021-76627022	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs67418609	chr15:76627089-76627090	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs28409716	chr15:76627151-76627152	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs144999674	chr15:76627181-76627182	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs559577684	chr15:76627200-76627201	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs558322553	chr15:76627221-76627222	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs540459954	chr15:76627281-76627282	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs28424571	chr15:76627287-76627288	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs555254117	chr15:76627306-76627307	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs12440815	chr15:76627328-76627329	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs11855999	chr15:76627333-76627334	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs28447574	chr15:76627336-76627337	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs112202976	chr15:76627364-76627365	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs561652474	chr15:76627445-76627446	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs68120273	chr15:76627454-76627455	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs56284054	chr15:76627483-76627484	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs544232953	chr15:76627504-76627505	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs545756363	chr15:76627507-76627508	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs570450104	chr15:76627508-76627509	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs181220345	chr15:76627547-76627548	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs143137197	chr15:76627550-76627551	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs547206814	chr15:76627554-76627555	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs138740346	chr15:76627579-76627580	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs529641397	chr15:76627601-76627602	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs11856079	chr15:76627606-76627607	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs377625981	chr15:76627648-76627649	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs550182342	chr15:76627679-76627680	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs186498667	chr15:76627680-76627681	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs189914579	chr15:76627703-76627704	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs370553789	chr15:76627716-76627717	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs372270228	chr15:76627723-76627724	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs180768364	chr15:76627737-76627738	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs555580999	chr15:76627764-76627765	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs113025316	chr15:76627784-76627785	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs573756548	chr15:76627785-76627786	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs538003427	chr15:76627787-76627788	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs140428072	chr15:76627788-76627789	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs185335485	chr15:76627793-76627794	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs202246729	chr15:76627794-76627795	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs577486097	chr15:76627843-76627844	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs116707106	chr15:76627847-76627848	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	17322880	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Autism	21480499	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21611746	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1171 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:76621000-76628000	Weak transcription	HSMMtube	muscle
2	chr15:76625600-76627000	Enhancers	K562	blood
3	chr15:76626000-76626800	Flanking Active TSS	A549	lung
4	chr15:76626000-76627000	Enhancers	Hela-S3	cervix
5	chr15:76626000-76627200	Flanking Active TSS	HepG2	liver
6	chr15:76626400-76626600	Bivalent/Poised TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr15:76626400-76626600	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr15:76626400-76626600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
9	chr15:76626400-76626600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr15:76626400-76626600	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
11	chr15:76626400-76626600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr15:76626400-76626600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr15:76626400-76626600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr15:76626400-76626600	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
15	chr15:76626400-76626800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
16	chr15:76626400-76626800	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
17	chr15:76626400-76627400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr15:76626400-76627600	Strong transcription	Right Atrium	heart
19	chr15:76626600-76626800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
20	chr15:76626600-76626800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
21	chr15:76626600-76626800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr15:76626600-76626800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
23	chr15:76626600-76627600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr15:76626800-76627000	Enhancers	A549	lung
25	chr15:76626800-76627600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr15:76626800-76627600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr15:76627000-76627200	Bivalent/Poised TSS	Primary neutrophils fromperipheralblood	blood
28	chr15:76627000-76627400	Weak transcription	A549	lung
29	chr15:76627000-76627400	Weak transcription	Hela-S3	cervix
30	chr15:76627000-76627400	Weak transcription	K562	blood
31	chr15:76627000-76627600	Bivalent Enhancer	Placenta	Placenta
32	chr15:76627000-76627800	Bivalent Enhancer	Left Ventricle	heart
33	chr15:76627000-76629000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
34	chr15:76627200-76627400	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
35	chr15:76627200-76627600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
36	chr15:76627200-76627600	Enhancers	HepG2	liver
37	chr15:76627200-76627800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
38	chr15:76627400-76627600	Bivalent/Poised TSS	Primary T cells from cord blood	blood
39	chr15:76627400-76627600	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
40	chr15:76627400-76627600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr15:76627400-76627600	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr15:76627400-76627600	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr15:76627400-76627600	Bivalent Enhancer	Duodenum Mucosa	Duodenum
44	chr15:76627400-76627600	Bivalent Enhancer	Fetal Intestine Small	intestine
45	chr15:76627400-76627600	Bivalent Enhancer	Fetal Stomach	stomach
46	chr15:76627400-76627600	Enhancers	Hela-S3	cervix
47	chr15:76627400-76627800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
48	chr15:76627400-76627800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
49	chr15:76627400-76627800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
50	chr15:76627400-76627800	Bivalent Enhancer	Fetal Intestine Large	intestine

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