Variant report

Variant	nsv829884
Chromosome Location	chr4:22865713-23031235
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:22899272-22899454	K562	blood:	n/a	n/a
2	ARID3A	chr4:23024772-23024793	K562	blood:	n/a	n/a
3	ARID3A	chr4:23003206-23003509	K562	blood:	n/a	chr4:23003431-23003447
4	ARID3A	chr4:22971300-22971641	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:22899185-22899471	HepG2	liver:	n/a	n/a
6	ARID3A	chr4:22897036-22897520	HepG2	liver:	n/a	n/a
7	ATF1	chr4:23003216-23003455	K562	blood:	n/a	n/a
8	BACH1	chr4:22999486-22999794	K562	blood:	n/a	n/a
9	BACH1	chr4:22918677-22918719	K562	blood:	n/a	n/a
10	BATF	chr4:22935474-22935715	GM12878	blood:	n/a	n/a
11	BCL11A	chr4:22885743-22886105	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL11A	chr4:22885970-22886163	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCL11A	chr4:22935546-22935707	GM12878	blood:	n/a	n/a
14	BCL11A	chr4:22935500-22935722	GM12878	blood:	n/a	n/a
15	BHLHE40	chr4:23010802-23011050	GM12878	blood:	n/a	n/a
16	BHLHE40	chr4:22896975-22897295	HepG2	liver:	n/a	n/a
17	BHLHE40	chr4:22999060-22999284	K562	blood:	n/a	n/a
18	BRCA1	chr4:22899347-22899433	HepG2	liver:	n/a	n/a
19	CCNT2	chr4:23003138-23003487	K562	blood:	n/a	n/a
20	CCNT2	chr4:22990380-22990846	K562	blood:	n/a	n/a
21	CEBPB	chr4:22980955-22981301	HepG2	liver:	n/a	n/a
22	CEBPB	chr4:22924952-22925152	HepG2	liver:	n/a	chr4:22925064-22925075
23	CEBPB	chr4:23023489-23024000	A549	lung:	n/a	n/a
24	CEBPB	chr4:22919827-22920036	A549	lung:	n/a	chr4:22919913-22919924 chr4:22919915-22919924 chr4:22919913-22919926 chr4:22919914-22919925
25	CEBPB	chr4:22919748-22920078	HepG2	liver:	n/a	chr4:22919913-22919924 chr4:22919915-22919924 chr4:22919913-22919926 chr4:22919914-22919925
26	CEBPB	chr4:23001185-23001413	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr4:23023505-23024068	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr4:22877968-22878252	HepG2	liver:	n/a	n/a
29	CEBPB	chr4:22937900-22938162	HepG2	liver:	n/a	chr4:22938010-22938021
30	CEBPB	chr4:22971259-22971582	MCF-7	breast:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
31	CEBPB	chr4:23023597-23024016	A549	lung:	n/a	n/a
32	CEBPB	chr4:22962760-22963052	IMR90	lung:	n/a	chr4:22962918-22962931 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962918-22962931
33	CEBPB	chr4:22962790-22963068	K562	blood:	n/a	chr4:22962918-22962931 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962918-22962931
34	CEBPB	chr4:22885915-22886185	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr4:23003289-23003446	K562	blood:	n/a	n/a
36	CEBPB	chr4:22962805-22963050	A549	lung:	n/a	chr4:22962918-22962931 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962918-22962931
37	CEBPB	chr4:22962748-22963083	HepG2	liver:	n/a	chr4:22962918-22962931 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962920-22962929 chr4:22962918-22962931
38	CEBPB	chr4:22980980-22981287	IMR90	lung:	n/a	n/a
39	CEBPB	chr4:22924888-22925085	A549	lung:	n/a	chr4:22925064-22925075
40	CEBPB	chr4:22980982-22981263	K562	blood:	n/a	n/a
41	CEBPB	chr4:22970778-22971746	A549	lung:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
42	CEBPB	chr4:22970866-22971624	HepG2	liver:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
43	CEBPB	chr4:22970805-22971583	A549	lung:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
44	CEBPB	chr4:22971200-22971684	A549	lung:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
45	CEBPB	chr4:22970806-22971591	IMR90	lung:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
46	CEBPB	chr4:22970806-22971153	A549	lung:	n/a	n/a
47	CEBPB	chr4:22919828-22920030	IMR90	lung:	n/a	chr4:22919913-22919924 chr4:22919915-22919924 chr4:22919913-22919926 chr4:22919914-22919925
48	CEBPB	chr4:22970760-22971748	Hela-S3	cervix:	n/a	chr4:22971420-22971433 chr4:22971420-22971431 chr4:22971422-22971433
49	CEBPB	chr4:22981018-22981257	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPD	chr4:23003099-23003544	K562	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:22913868-22913918	AG04449	skin:	fetal
2	chr4:22913868-22913918	NB4	blood:	n/a
3	chr4:22998088-22998138	HPAEpiC	pulmonary alveolar:	n/a
4	chr4:22999086-22999136	HAEpiC	amniotic membrane:	n/a
5	chr4:23017280-23017330	AG09319	gingival:	n/a
6	chr4:22998088-22998138	HCT-116	colon:	n/a
7	chr4:22999086-22999136	NH-A	brain:	n/a
8	chr4:22999077-22999127	PrEC	prostate:	n/a
9	chr4:22913868-22913918	CMK	blood:	n/a
10	chr4:22999077-22999127	IMR90	lung:	fetal
11	chr4:22913868-22913918	HCT-116	colon:	n/a
12	chr4:22913868-22913918	HCPEpiC	choroid plexus:	n/a
13	chr4:22913868-22913918	Hela-S3	cervix:	n/a
14	chr4:22999077-22999127	BJ	skin:	n/a
15	chr4:22998088-22998138	ECC-1	luminal epithelium:	n/a
16	chr4:23017280-23017330	HEK293	kidney:	embryo
17	chr4:22999086-22999136	U87	brain:	n/a
18	chr4:22999077-22999127	Hepatocyte	liver:	n/a
19	chr4:22999077-22999127	AG04449	skin:	fetal
20	chr4:22999086-22999136	GM12891	blood:	n/a
21	chr4:22998088-22998138	HEK293	kidney:	embryo
22	chr4:22998088-22998138	GM12891	blood:	n/a
23	chr4:22999077-22999127	NB4	blood:	n/a
24	chr4:22999086-22999136	SK-N-MC	brain:	n/a
25	chr4:22999077-22999127	PANC-1	pancreas:	n/a
26	chr4:22998088-22998138	H1-hESC	embryonic stem cell:	embryo
27	chr4:22913868-22913918	BJ	skin:	n/a
28	chr4:23017280-23017330	HMEC	breast:	n/a
29	chr4:22913868-22913918	Hepatocyte	liver:	n/a
30	chr4:23017280-23017330	HIPEpiC	eye:	n/a
31	chr4:22998088-22998138	Jurkat	blood:	n/a
32	chr4:22998088-22998138	BJ	skin:	n/a
33	chr4:22913868-22913918	SK-N-SH_RA	brain:	n/a
34	chr4:23017280-23017330	NHBE	bronchial:	n/a
35	chr4:22998088-22998138	HEEpiC	esophagus:	n/a
36	chr4:22999077-22999127	HRCEpiC	kidney:	n/a
37	chr4:22999077-22999127	HCPEpiC	choroid plexus:	n/a
38	chr4:22999077-22999127	HNPCEpiC	eye:	n/a
39	chr4:22998088-22998138	ovcar-3	ovarian:	n/a
40	chr4:22999086-22999136	HCPEpiC	choroid plexus:	n/a
41	chr4:22999077-22999127	HEK293	kidney:	embryo
42	chr4:23017280-23017330	Hela-S3	cervix:	n/a
43	chr4:22999086-22999136	HRPEpiC	eye:	n/a
44	chr4:22999086-22999136	SKMC	muscle:	n/a
45	chr4:23017280-23017330	SK-N-SH_RA	brain:	n/a
46	chr4:22913868-22913918	HAEpiC	amniotic membrane:	n/a
47	chr4:22913868-22913918	HMEC	breast:	n/a
48	chr4:22998088-22998138	HCF	heart:	n/a
49	chr4:22999077-22999127	SK-N-SH_RA	brain:	n/a
50	chr4:22998088-22998138	A549	lung:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:23008683..23011389-chr4:23014182..23016492,2	K562	blood:
2	chr4:23000767..23002953-chr4:23019214..23021124,3	K562	blood:
3	chr4:23015569..23018228-chr4:23029795..23032020,2	K562	blood:
4	chr4:22927818..22930601-chr4:22932236..22933827,2	K562	blood:
5	chr4:23004754..23006803-chr4:23019962..23022159,2	K562	blood:
6	chr4:23025702..23027714-chr4:23029326..23031451,2	K562	blood:
7	chr4:22997667..23000614-chr4:23007392..23009640,3	K562	blood:
8	chr4:22927818..22930601-chr4:22932236..22933827,2	K562	blood:
9	chr4:22938501..22940847-chr4:22943530..22945759,2	K562	blood:
10	chr4:23015569..23018228-chr4:23029795..23032020,2	K562	blood:
11	chr4:23025702..23027714-chr4:23029326..23031451,2	K562	blood:
12	chr4:23007518..23009200-chr4:23009340..23011192,2	K562	blood:
13	chr4:22998275..23001273-chr4:23003016..23005403,4	K562	blood:
14	chr4:23007518..23009200-chr4:23009340..23011192,2	K562	blood:
15	chr4:23013552..23016486-chr4:23017728..23021561,5	K562	blood:
16	chr4:23013552..23016486-chr4:23017728..23021561,5	K562	blood:
17	chr4:23008683..23011389-chr4:23014182..23016492,2	K562	blood:
18	chr4:23025129..23027876-chr4:23268002..23269525,2	K562	blood:
19	chr4:22992595..22995283-chr4:22996612..22998977,2	K562	blood:
20	chr4:23014056..23015884-chr4:23019652..23021561,2	K562	blood:
21	chr4:22998284..23000939-chr4:23014956..23016879,2	K562	blood:
22	chr4:23014056..23015884-chr4:23019652..23021561,2	K562	blood:
23	chr4:22992595..22995283-chr4:22996612..22998977,2	K562	blood:
24	chr4:22875811..22877491-chr4:22882089..22884830,2	K562	blood:
25	chr4:22998275..23001273-chr4:23003016..23005403,4	K562	blood:
26	chr4:22899142..22899801-chr4:24420786..24421361,2	MCF-7	breast:
27	chr4:22875811..22877491-chr4:22882089..22884830,2	K562	blood:
28	chr4:22938501..22940847-chr4:22943530..22945759,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SOD3-6	chr4:23004776-23004866	ENSG00000248837
2	lnc-SOD3-6	chr4:23001209-23001335	ENSG00000248837
3	lnc-SOD3-6	chr4:23004707-23004866	NONHSAT095769
4	lnc-SOD3-6	chr4:22999174-22999236	ENSG00000248837
5	lnc-SOD3-6	chr4:23004773-23004866	ENSG00000248837
6	lnc-SOD3-6	chr4:23001208-23001335	NONHSAT095769
7	lnc-SOD3-6	chr4:23001208-23001335	ENSG00000248837
8	lnc-SOD3-6	chr4:23004773-23004866	ENSG00000248837
9	lnc-SOD3-6	chr4:22999105-22999236	NONHSAT095769

Variant related genes	Relation type
ENSG00000248837	TF binding region
ENSG00000248837	CpG island
ENSG00000248837	chromatin interactions
SRGAP1	miRNA target sites
ARL2	miRNA target sites
ASH1L	miRNA target sites
SCML1	miRNA target sites
MYH4	miRNA target sites

Extended variants
information (count: 3511 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:3511 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs182834625	chr4:22874849-22874850	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs565353114	chr4:22874856-22874857	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs147105518	chr4:22874904-22874905	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs544406351	chr4:22874915-22874916	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs562714275	chr4:22874942-22874943	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs547437714	chr4:22874956-22874957	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs530012497	chr4:22874957-22874958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs141158437	chr4:22874998-22874999	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs566663442	chr4:22875056-22875057	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs527246112	chr4:22875061-22875062	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs368890476	chr4:22875066-22875067	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs112855447	chr4:22875091-22875092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs547461104	chr4:22875133-22875134	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs551905348	chr4:22875170-22875171	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs561462810	chr4:22875196-22875197	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs570188079	chr4:22875203-22875204	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs537582076	chr4:22875243-22875244	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs188701169	chr4:22875324-22875325	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs145628455	chr4:22875383-22875384	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs572694655	chr4:22875413-22875414	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs372412538	chr4:22875428-22875429	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs34205157	chr4:22875442-22875443	Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs58426635	chr4:22875468-22875469	Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs57510539	chr4:22875504-22875505	Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs573483344	chr4:22875570-22875571	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs116326778	chr4:22875585-22875586	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs559027805	chr4:22875589-22875590	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs577407713	chr4:22875590-22875591	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs115595437	chr4:22875595-22875596	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs562971894	chr4:22875635-22875636	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs529855859	chr4:22875678-22875679	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs569084440	chr4:22875687-22875688	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs537994243	chr4:22875699-22875700	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs541673409	chr4:22875700-22875701	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs192814741	chr4:22875740-22875741	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs185280043	chr4:22875792-22875793	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs188064925	chr4:22875806-22875807	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs571558948	chr4:22875807-22875808	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs563776745	chr4:22875819-22875820	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs35862674	chr4:22875851-22875852	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs367976960	chr4:22875874-22875875	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs542287548	chr4:22875886-22875887	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs544115111	chr4:22875914-22875915	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs531300676	chr4:22875924-22875925	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs192479383	chr4:22875967-22875968	Flanking Active TSS Enhancers Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs562607088	chr4:22876081-22876082	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs75866070	chr4:22876089-22876090	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs116165434	chr4:22876119-22876120	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs4146272	chr4:22876121-22876122	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs148019015	chr4:22876167-22876168	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Lung cancer	18438408	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Breast cancer	17133270	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Olfactory neuroblastoma	18408657	CNVD
Burkitt''s lymphoma	20823134	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
Cancer	22183965	CNVD
Gastric cancer	16891809	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:283 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:22874800-22877200	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr4:22874800-22878800	Enhancers	Fetal Intestine Small	intestine
3	chr4:22874800-22879000	Enhancers	Fetal Intestine Large	intestine
4	chr4:22875000-22875200	Enhancers	Sigmoid Colon	Sigmoid Colon
5	chr4:22875000-22875600	Enhancers	Liver	Liver
6	chr4:22875200-22875400	Enhancers	Rectal Mucosa Donor 29	rectum
7	chr4:22875400-22875600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
8	chr4:22875600-22876000	Flanking Active TSS	Liver	Liver
9	chr4:22875600-22876000	Active TSS	Rectal Mucosa Donor 29	rectum
10	chr4:22875600-22876200	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr4:22876000-22876200	Enhancers	Liver	Liver
12	chr4:22876000-22876200	Enhancers	Rectal Mucosa Donor 29	rectum
13	chr4:22876200-22876400	Flanking Active TSS	Liver	Liver
14	chr4:22876200-22876400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
15	chr4:22876200-22876400	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr4:22876400-22877000	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr4:22876400-22878000	Enhancers	Liver	Liver
18	chr4:22877200-22877600	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr4:22877600-22878000	Enhancers	Rectal Mucosa Donor 31	rectum
20	chr4:22877800-22878000	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr4:22878600-22880800	Enhancers	Brain Germinal Matrix	brain
22	chr4:22878800-22879600	Enhancers	Fetal Brain Female	brain
23	chr4:22878800-22881200	Weak transcription	Fetal Intestine Small	intestine
24	chr4:22879000-22880200	Weak transcription	Fetal Intestine Large	intestine
25	chr4:22880600-22880800	Enhancers	Fetal Intestine Large	intestine
26	chr4:22881200-22881400	Enhancers	Fetal Intestine Small	intestine
27	chr4:22883200-22883800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr4:22884000-22887400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr4:22886800-22887600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
30	chr4:22896400-22899200	Enhancers	HepG2	liver
31	chr4:22896800-22898000	Enhancers	Liver	Liver
32	chr4:22898200-22899000	Enhancers	Fetal Lung	lung
33	chr4:22898600-22899200	Enhancers	Fetal Intestine Small	intestine
34	chr4:22899000-22902400	Weak transcription	Fetal Lung	lung
35	chr4:22899400-22901000	Enhancers	Primary hematopoietic stem cells	blood
36	chr4:22899400-22901200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr4:22900000-22901200	Enhancers	Primary hematopoietic stem cells short term culture	blood
38	chr4:22900000-22901200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr4:22900400-22900800	Enhancers	Primary neutrophils fromperipheralblood	blood
40	chr4:22901200-22905200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr4:22902200-22903000	Enhancers	Colon Smooth Muscle	Colon
42	chr4:22902400-22903000	Enhancers	Fetal Lung	lung
43	chr4:22902600-22903000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr4:22902800-22903200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr4:22903000-22903600	Weak transcription	Fetal Lung	lung
46	chr4:22903200-22903400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr4:22903400-22903800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr4:22903600-22903800	Enhancers	Fetal Lung	lung
49	chr4:22903600-22904200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr4:22905200-22905800	Enhancers	Primary hematopoietic stem cells short term culture	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links