Variant report

Variant nsv830457
Chromosome Location chr5:116724777-116875060
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:342 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:116725600-116725800 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:116729800-116730600 Enhancers Rectal Mucosa Donor 29 rectum
3 chr5:116730000-116730600 Enhancers Colon Smooth Muscle Colon
4 chr5:116730000-116731200 Enhancers Rectal Mucosa Donor 31 rectum
5 chr5:116730200-116730400 Enhancers Psoas Muscle Psoas
6 chr5:116732000-116732200 Enhancers Brain Germinal Matrix brain
7 chr5:116732800-116734400 Enhancers Fetal Lung lung
8 chr5:116733200-116734600 Enhancers Fetal Stomach stomach
9 chr5:116733800-116734200 Enhancers Fetal Brain Female brain
10 chr5:116733800-116734800 Enhancers Brain Germinal Matrix brain
11 chr5:116739200-116740000 Enhancers Rectal Mucosa Donor 31 rectum
12 chr5:116739800-116740400 Active TSS Placenta Placenta
13 chr5:116740000-116741000 Active TSS Hela-S3 cervix
14 chr5:116740000-116741200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:116741000-116741800 Enhancers Colon Smooth Muscle Colon
16 chr5:116741200-116741800 Enhancers Rectal Mucosa Donor 29 rectum
17 chr5:116741200-116742000 Enhancers Rectal Mucosa Donor 31 rectum
18 chr5:116747000-116748200 Enhancers HUVEC blood vessel
19 chr5:116747200-116747600 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr5:116747200-116747600 Enhancers HUES48 Cell Line embryonic stem cell
21 chr5:116747200-116747600 Enhancers HUES6 Cell Line embryonic stem cell
22 chr5:116747200-116747800 Enhancers Sigmoid Colon Sigmoid Colon
23 chr5:116747200-116748000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:116747400-116747800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr5:116747400-116747800 Enhancers Rectal Mucosa Donor 29 rectum
26 chr5:116748000-116748800 Enhancers Fetal Lung lung
27 chr5:116748800-116752600 Weak transcription Fetal Lung lung
28 chr5:116750600-116753200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:116752600-116752800 Enhancers Fetal Lung lung
30 chr5:116752800-116753200 Weak transcription Fetal Lung lung
31 chr5:116753200-116753600 Enhancers Fetal Lung lung
32 chr5:116756400-116756800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:116760400-116761800 Enhancers HUES6 Cell Line embryonic stem cell
34 chr5:116760400-116761800 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr5:116760800-116761400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr5:116760800-116761600 Enhancers HUES64 Cell Line embryonic stem cell
37 chr5:116761000-116761400 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr5:116761000-116761400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr5:116766600-116766800 Enhancers Stomach Smooth Muscle stomach
40 chr5:116766600-116767400 Enhancers Colon Smooth Muscle Colon
41 chr5:116766600-116767400 Enhancers Rectal Smooth Muscle rectum
42 chr5:116766800-116767400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr5:116766800-116769600 Weak transcription Stomach Smooth Muscle stomach
44 chr5:116767400-116769000 Weak transcription Colon Smooth Muscle Colon
45 chr5:116767400-116769400 Weak transcription Rectal Smooth Muscle rectum
46 chr5:116767800-116768000 Enhancers Fetal Stomach stomach
47 chr5:116768000-116769000 Weak transcription Fetal Stomach stomach
48 chr5:116769000-116770400 Enhancers Fetal Stomach stomach
49 chr5:116769000-116772200 Enhancers Colon Smooth Muscle Colon
50 chr5:116769400-116769800 Enhancers ES-WA7 Cell Line embryonic stem cell

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