Variant report

Variant	nsv873225
Chromosome Location	chr1:225162060-225373936
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:540)
CpG islands
(count:61)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:540 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:225192292-225192433	HepG2	liver:	n/a	n/a
2	ARID3A	chr1:225169624-225170034	HepG2	liver:	n/a	n/a
3	ATF1	chr1:225368725-225368728	K562	blood:	n/a	n/a
4	BACH1	chr1:225229451-225229466	K562	blood:	n/a	n/a
5	BRCA1	chr1:225325986-225326003	HepG2	liver:	n/a	n/a
6	CBX3	chr1:225251481-225251774	K562	blood:	n/a	n/a
7	CBX3	chr1:225183306-225183672	HCT-116	colon:	n/a	n/a
8	CBX3	chr1:225365321-225365563	K562	blood:	n/a	n/a
9	CBX3	chr1:225365330-225365566	K562	blood:	n/a	n/a
10	CBX3	chr1:225204354-225204636	K562	blood:	n/a	n/a
11	CEBPB	chr1:225185897-225186265	A549	lung:	n/a	chr1:225186076-225186087
12	CEBPB	chr1:225302065-225302276	HepG2	liver:	n/a	chr1:225302164-225302175
13	CEBPB	chr1:225188410-225188431	HepG2	liver:	n/a	chr1:225188414-225188425
14	CEBPB	chr1:225308815-225309121	H1-hESC	embryonic stem cell:	n/a	chr1:225308986-225308997
15	CEBPB	chr1:225308838-225309244	A549	lung:	n/a	chr1:225308986-225308997
16	CEBPB	chr1:225302089-225302313	Hela-S3	cervix:	n/a	chr1:225302164-225302175
17	CEBPB	chr1:225231991-225232354	Hela-S3	cervix:	n/a	chr1:225232161-225232172
18	CEBPB	chr1:225308807-225309166	HepG2	liver:	n/a	chr1:225308986-225308997
19	CEBPB	chr1:225308863-225309125	A549	lung:	n/a	chr1:225308986-225308997
20	CEBPB	chr1:225308825-225309165	Hela-S3	cervix:	n/a	chr1:225308986-225308997
21	CEBPB	chr1:225185901-225186263	HepG2	liver:	n/a	chr1:225186076-225186087
22	CEBPB	chr1:225185883-225186203	ECC-1	luminal epithelium:	n/a	chr1:225186076-225186087
23	CEBPB	chr1:225214987-225215033	A549	lung:	n/a	n/a
24	CEBPB	chr1:225185929-225186321	A549	lung:	n/a	chr1:225186076-225186087
25	CEBPB	chr1:225185903-225186257	IMR90	lung:	n/a	chr1:225186076-225186087
26	CEBPB	chr1:225185910-225186263	Hela-S3	cervix:	n/a	chr1:225186076-225186087
27	CEBPB	chr1:225182531-225182863	HepG2	liver:	n/a	n/a
28	CEBPB	chr1:225188408-225188434	A549	lung:	n/a	chr1:225188414-225188425
29	CEBPB	chr1:225323924-225323961	A549	lung:	n/a	n/a
30	CEBPB	chr1:225308810-225309179	A549	lung:	n/a	chr1:225308986-225308997
31	CEBPB	chr1:225185938-225186201	A549	lung:	n/a	chr1:225186076-225186087
32	CEBPB	chr1:225232007-225232356	HepG2	liver:	n/a	chr1:225232161-225232172
33	CEBPB	chr1:225251396-225251573	HepG2	liver:	n/a	chr1:225251435-225251446
34	CEBPB	chr1:225241393-225241550	HepG2	liver:	n/a	chr1:225241423-225241434 chr1:225241483-225241494
35	CEBPB	chr1:225241337-225241539	A549	lung:	n/a	chr1:225241423-225241434 chr1:225241483-225241494
36	CEBPB	chr1:225232025-225232315	K562	blood:	n/a	chr1:225232161-225232172
37	CEBPB	chr1:225185945-225186230	H1-hESC	embryonic stem cell:	n/a	chr1:225186076-225186087
38	CEBPB	chr1:225185918-225186199	MCF-7	breast:	n/a	chr1:225186076-225186087
39	CEBPB	chr1:225182540-225182796	A549	lung:	n/a	n/a
40	CEBPB	chr1:225308816-225309180	K562	blood:	n/a	chr1:225308986-225308997
41	CEBPB	chr1:225308818-225309168	IMR90	lung:	n/a	chr1:225308986-225308997
42	CEBPB	chr1:225308834-225309187	ECC-1	luminal epithelium:	n/a	chr1:225308986-225308997
43	CEBPB	chr1:225182674-225182786	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr1:225231925-225232349	ECC-1	luminal epithelium:	n/a	chr1:225232161-225232172
45	CEBPB	chr1:225308815-225309171	MCF-7	breast:	n/a	chr1:225308986-225308997
46	CEBPB	chr1:225232029-225232387	ECC-1	luminal epithelium:	n/a	chr1:225232161-225232172
47	CEBPB	chr1:225232045-225232269	A549	lung:	n/a	chr1:225232161-225232172
48	CEBPB	chr1:225185911-225186272	K562	blood:	n/a	chr1:225186076-225186087
49	CEBPB	chr1:225232035-225232261	H1-hESC	embryonic stem cell:	n/a	chr1:225232161-225232172
50	CHD2	chr1:225169774-225169978	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:225332226-225332276	HepG2	liver:	n/a
2	chr1:225332226-225332276	HIPEpiC	eye:	n/a
3	chr1:225332226-225332276	ProgFib	skin:	n/a
4	chr1:225332226-225332276	SAEC	small airway:	n/a
5	chr1:225332226-225332276	HUVEC	blood vessel:	n/a
6	chr1:225332226-225332276	U87	brain:	n/a
7	chr1:225332226-225332276	GM12892	blood:	n/a
8	chr1:225332226-225332276	SKMC	muscle:	n/a
9	chr1:225332226-225332276	AG09319	gingival:	n/a
10	chr1:225332226-225332276	GM06990	blood:	n/a
11	chr1:225332226-225332276	AG04450	lung:	fetal
12	chr1:225332226-225332276	AG09309	skin:	n/a
13	chr1:225332226-225332276	HEK293	kidney:	embryo
14	chr1:225332226-225332276	PFSK-1	brain:	n/a
15	chr1:225332226-225332276	MCF-7	breast:	n/a
16	chr1:225332226-225332276	NB4	blood:	n/a
17	chr1:225332226-225332276	PANC-1	pancreas:	n/a
18	chr1:225332226-225332276	GM19239	blood:	n/a
19	chr1:225332226-225332276	HCM	heart:	n/a
20	chr1:225332226-225332276	SK-N-SH	brain:	n/a
21	chr1:225332226-225332276	RPTEC	kidney:	n/a
22	chr1:225332226-225332276	HCT-116	colon:	n/a
23	chr1:225332226-225332276	H1-hESC	embryonic stem cell:	embryo
24	chr1:225332226-225332276	ovcar-3	ovarian:	n/a
25	chr1:225332226-225332276	NT2-D1	testis:	n/a
26	chr1:225332226-225332276	NHBE	bronchial:	n/a
27	chr1:225332226-225332276	GM12891	blood:	n/a
28	chr1:225332226-225332276	PrEC	prostate:	n/a
29	chr1:225332226-225332276	AoSMC	blood vessel:	n/a
30	chr1:225332226-225332276	LNCaP	prostate:	n/a
31	chr1:225332226-225332276	HPAEpiC	pulmonary alveolar:	n/a
32	chr1:225332226-225332276	HL-60	blood:	n/a
33	chr1:225332226-225332276	K562	blood:	n/a
34	chr1:225332226-225332276	Hepatocyte	liver:	n/a
35	chr1:225332226-225332276	MCF10A-Er-Src	breast:	n/a
36	chr1:225332226-225332276	SK-N-MC	brain:	n/a
37	chr1:225332226-225332276	T-47D	breast:	n/a
38	chr1:225332226-225332276	IMR90	lung:	fetal
39	chr1:225332226-225332276	HNPCEpiC	eye:	n/a
40	chr1:225332226-225332276	HRCEpiC	kidney:	n/a
41	chr1:225332226-225332276	Caco-2	colon:	n/a
42	chr1:225332226-225332276	HCPEpiC	choroid plexus:	n/a
43	chr1:225332226-225332276	HEEpiC	esophagus:	n/a
44	chr1:225332226-225332276	BJ	skin:	n/a
45	chr1:225332226-225332276	HAEpiC	amniotic membrane:	n/a
46	chr1:225332226-225332276	Jurkat	blood:	n/a
47	chr1:225332226-225332276	HMEC	breast:	n/a
48	chr1:225332226-225332276	HRPEpiC	eye:	n/a
49	chr1:225332226-225332276	BE2_C	brain:	n/a
50	chr1:225332226-225332276	CMK	blood:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:225114949..225117606-chr1:225342545..225344625,2	K562	blood:
2	chr1:225202258..225204234-chr8:111898982..111900583,2	MCF-7	breast:
3	chr1:225204703..225207335-chr1:225217608..225220449,2	K562	blood:
4	chr1:225268034..225271862-chr1:225273002..225275379,3	K562	blood:
5	chr1:225229374..225230956-chr1:225231061..225233757,2	K562	blood:
6	chr1:225204703..225207335-chr1:225217608..225220449,2	K562	blood:
7	chr1:225339059..225340673-chr1:225341407..225343124,2	K562	blood:
8	chr1:225265020..225266847-chr1:225269250..225271581,2	K562	blood:
9	chr1:225187463..225189933-chr1:225191453..225195155,3	K562	blood:
10	chr1:225187463..225189933-chr1:225191453..225195155,3	K562	blood:
11	chr1:225208646..225211614-chr1:225214288..225217124,2	K562	blood:
12	chr1:225283829..225285638-chr1:225286996..225289019,2	K562	blood:
13	chr1:225265020..225266847-chr1:225269250..225271581,2	K562	blood:
14	chr1:225208646..225211614-chr1:225214288..225217124,2	K562	blood:
15	chr1:225116575..225119201-chr1:225198743..225201718,2	MCF-7	breast:
16	chr1:225226692..225229117-chr1:225229791..225231600,2	K562	blood:
17	chr1:225326089..225328657-chr1:225330172..225331750,2	K562	blood:
18	chr1:225229374..225230956-chr1:225231061..225233757,2	K562	blood:
19	chr1:225339059..225340673-chr1:225341407..225343124,2	K562	blood:
20	chr1:225326089..225328657-chr1:225330172..225331750,2	K562	blood:
21	chr1:225226692..225229117-chr1:225229791..225231600,2	K562	blood:
22	chr1:225116223..225117951-chr1:225191253..225193259,2	MCF-7	breast:
23	chr1:225283829..225285638-chr1:225286996..225289019,2	K562	blood:

No data

Variant related genes	Relation type
DNAH14	TF binding region
DNAH14	CpG island
ENSG00000185842	chromatin interactions

Extended variants
information (count: 7214 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:7214 , 50 per page) page: 1 2 3 4 5 6 7 ... 145

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10915751	chr1:225162060-225162061	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs192975658	chr1:225162071-225162072	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs559846300	chr1:225162096-225162097	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs527300404	chr1:225162111-225162112	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs2501141	chr1:225162173-225162174	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs140943305	chr1:225162230-225162231	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs531511133	chr1:225162272-225162273	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs145082839	chr1:225162299-225162300	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs2501140	chr1:225162323-225162324	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs147591032	chr1:225162341-225162342	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs184753351	chr1:225162354-225162355	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs374238552	chr1:225162376-225162377	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs12565439	chr1:225162389-225162390	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs555421836	chr1:225162559-225162560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs573845033	chr1:225162592-225162593	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs189673231	chr1:225162613-225162614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12061874	chr1:225162630-225162631	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs61852101	chr1:225162639-225162640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs374576062	chr1:225162640-225162641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs2501139	chr1:225162676-225162677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs545346462	chr1:225162742-225162743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs375908278	chr1:225162780-225162781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs368796421	chr1:225162789-225162790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs571928114	chr1:225162818-225162819	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs542671952	chr1:225162822-225162823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs560960990	chr1:225162823-225162824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs61852102	chr1:225162839-225162840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs531474007	chr1:225162852-225162853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs7413344	chr1:225162881-225162882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs112843568	chr1:225162889-225162890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs9660260	chr1:225162896-225162897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs180690773	chr1:225162902-225162903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs565939430	chr1:225162910-225162911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs564904246	chr1:225162988-225162989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532352586	chr1:225163000-225163001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs547359654	chr1:225163012-225163013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs565995038	chr1:225163037-225163038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs527678861	chr1:225163128-225163129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs185992966	chr1:225163297-225163298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs9426102	chr1:225163349-225163350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs567333199	chr1:225163392-225163393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs188445000	chr1:225163394-225163395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs76030798	chr1:225163411-225163412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs556637864	chr1:225163462-225163463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs201475768	chr1:225163466-225163467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs202053434	chr1:225163478-225163479	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs10915752	chr1:225163501-225163502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs200135667	chr1:225163521-225163522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs142156681	chr1:225163547-225163548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs374834331	chr1:225163553-225163554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Developmental delay	21147756	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:304 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225138800-225163800	Weak transcription	Hela-S3	cervix
2	chr1:225141400-225162600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr1:225142800-225162200	Weak transcription	Fetal Kidney	kidney
4	chr1:225142800-225164400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr1:225150400-225167200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr1:225150400-225171200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr1:225157200-225172200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr1:225157400-225163800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr1:225157400-225165200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr1:225157600-225164000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr1:225157600-225165400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr1:225157600-225201400	Weak transcription	Pancreas	Pancrea
13	chr1:225161200-225163800	Weak transcription	K562	blood
14	chr1:225161800-225162200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
15	chr1:225162200-225162400	ZNF genes & repeats	Fetal Kidney	kidney
16	chr1:225162400-225162600	Weak transcription	Fetal Kidney	kidney
17	chr1:225165400-225165800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr1:225165800-225169400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr1:225166200-225167400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr1:225167200-225168600	Enhancers	Primary hematopoietic stem cells short term culture	blood
21	chr1:225167400-225168600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr1:225168600-225171000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr1:225169400-225169600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
24	chr1:225169400-225170000	Enhancers	HepG2	liver
25	chr1:225169400-225170200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr1:225169400-225170200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
27	chr1:225170000-225170200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
28	chr1:225170000-225170200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
29	chr1:225170000-225170200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
30	chr1:225170000-225170200	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr1:225170000-225170400	Flanking Active TSS	HepG2	liver
32	chr1:225170200-225170400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr1:225170400-225170600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr1:225182800-225184800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr1:225184200-225184600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr1:225184600-225185800	Weak transcription	Fetal Brain Male	brain
37	chr1:225184600-225202800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr1:225187000-225203600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr1:225187800-225189200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr1:225187800-225192400	Weak transcription	Primary hematopoietic stem cells	blood
41	chr1:225190200-225192200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr1:225190400-225201400	Weak transcription	Gastric	stomach
43	chr1:225191200-225199000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr1:225192200-225192400	Weak transcription	Ovary	ovary
45	chr1:225192200-225192600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr1:225192400-225192600	ZNF genes & repeats	Primary hematopoietic stem cells	blood
47	chr1:225192400-225192600	ZNF genes & repeats	Ovary	ovary
48	chr1:225192600-225194000	Weak transcription	Primary hematopoietic stem cells	blood
49	chr1:225192600-225203400	Weak transcription	Ovary	ovary
50	chr1:225194000-225194600	ZNF genes & repeats	Primary hematopoietic stem cells	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links