Variant report

Variant nsv873226
Chromosome Location chr1:225347689-225555602
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:253 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225301800-225355800 Weak transcription Pancreas Pancrea
2 chr1:225322000-225356000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:225326400-225355800 Weak transcription Ovary ovary
4 chr1:225332800-225356000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:225338200-225355600 Weak transcription Primary hematopoietic stem cells blood
6 chr1:225344000-225356200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:225353400-225355800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:225354800-225357200 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:225355400-225356000 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:225355400-225356600 Weak transcription Liver Liver
11 chr1:225355400-225356800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:225355600-225356800 ZNF genes & repeats Primary hematopoietic stem cells blood
13 chr1:225355800-225356400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:225355800-225356800 ZNF genes & repeats Fetal Intestine Small intestine
15 chr1:225355800-225356800 ZNF genes & repeats Ovary ovary
16 chr1:225355800-225356800 ZNF genes & repeats Pancreas Pancrea
17 chr1:225356000-225356200 Weak transcription Thymus Thymus
18 chr1:225356000-225356400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
19 chr1:225356000-225356800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:225356000-225356800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:225356000-225356800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
22 chr1:225356000-225356800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
23 chr1:225356000-225356800 ZNF genes & repeats Fetal Intestine Large intestine
24 chr1:225356200-225356400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:225356200-225356600 ZNF genes & repeats Thymus Thymus
26 chr1:225356200-225356800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:225356200-225356800 ZNF genes & repeats Fetal Stomach stomach
28 chr1:225356400-225357600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:225356600-225356800 ZNF genes & repeats Liver Liver
30 chr1:225356800-225357000 Weak transcription Liver Liver
31 chr1:225356800-225357200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:225356800-225357200 Weak transcription Fetal Intestine Large intestine
33 chr1:225356800-225365200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:225356800-225365200 Weak transcription Pancreas Pancrea
35 chr1:225365200-225365600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:225365200-225366000 ZNF genes & repeats Pancreas Pancrea
37 chr1:225365400-225366000 ZNF genes & repeats Liver Liver
38 chr1:225366000-225372400 Weak transcription Pancreas Pancrea
39 chr1:225368400-225373200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:225370000-225372400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:225370200-225370800 ZNF genes & repeats Fetal Intestine Small intestine
42 chr1:225373800-225374800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:225374800-225375200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:225375200-225378400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:225375800-225377000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:225378400-225380200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:225379400-225381600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:225380200-225386000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:225384200-225384600 Weak transcription Liver Liver
50 chr1:225389000-225389600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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