Variant report

Variant	nsv877787
Chromosome Location	chr3:162678550-162809107
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:655)
CpG islands
(count:183)
Chromatin interactive
region (count:19)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:655 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BRCA1	chr3:162774683-162774995	Hela-S3	cervix:	n/a	n/a
2	BRCA1	chr3:162717002-162717061	Hela-S3	cervix:	n/a	n/a
3	BRCA1	chr3:162774855-162774871	HepG2	liver:	n/a	n/a
4	CEBPB	chr3:162682143-162682476	HepG2	liver:	n/a	chr3:162682288-162682299
5	CEBPB	chr3:162789480-162789977	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr3:162682141-162682443	A549	lung:	n/a	chr3:162682288-162682299
7	CEBPB	chr3:162696021-162696193	K562	blood:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
8	CEBPB	chr3:162774587-162774998	MCF-7	breast:	n/a	n/a
9	CEBPB	chr3:162695982-162696258	H1-hESC	embryonic stem cell:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
10	CEBPB	chr3:162729522-162729600	A549	lung:	n/a	n/a
11	CEBPB	chr3:162773968-162774176	HepG2	liver:	n/a	chr3:162774022-162774033
12	CEBPB	chr3:162711790-162712125	HepG2	liver:	n/a	chr3:162711927-162711938
13	CEBPB	chr3:162695846-162696372	A549	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
14	CEBPB	chr3:162729049-162729851	MCF-7	breast:	n/a	n/a
15	CEBPB	chr3:162695964-162696261	HepG2	liver:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
16	CEBPB	chr3:162774594-162775003	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr3:162711839-162712097	IMR90	lung:	n/a	chr3:162711927-162711938
18	CEBPB	chr3:162729092-162729733	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr3:162695893-162696380	MCF-7	breast:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
20	CEBPB	chr3:162774590-162774941	A549	lung:	n/a	n/a
21	CEBPB	chr3:162682128-162682457	IMR90	lung:	n/a	chr3:162682288-162682299
22	CEBPB	chr3:162695972-162696288	IMR90	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
23	CEBPB	chr3:162696009-162696307	A549	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
24	CEBPB	chr3:162695952-162696294	A549	lung:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
25	CEBPB	chr3:162682187-162682344	K562	blood:	n/a	chr3:162682288-162682299
26	CEBPB	chr3:162695938-162696308	MCF-7	breast:	n/a	chr3:162696130-162696139 chr3:162696130-162696139 chr3:162696130-162696139
27	CEBPB	chr3:162774571-162774995	H1-hESC	embryonic stem cell:	n/a	n/a
28	CEBPB	chr3:162729220-162729874	MCF-7	breast:	n/a	n/a
29	CEBPB	chr3:162729383-162729666	H1-hESC	embryonic stem cell:	n/a	n/a
30	CTCF	chr3:162774744-162774992	SK-N-SH_RA	brain:	n/a	n/a
31	CTCF	chr3:162774820-162774970	GM12869	blood:	n/a	n/a
32	CTCF	chr3:162774820-162774970	HepG2	liver:	n/a	n/a
33	CTCF	chr3:162775160-162775310	GM12866	blood:	n/a	n/a
34	CTCF	chr3:162774820-162774970	HA-sp	spinal cord:	n/a	n/a
35	CTCF	chr3:162760982-162761149	GM19238	blood:	n/a	n/a
36	CTCF	chr3:162761000-162761150	HPF	lung:	n/a	n/a
37	CTCF	chr3:162774780-162774930	HEEpiC	esophagus:	n/a	n/a
38	CTCF	chr3:162761000-162761150	Caco-2	colon:	n/a	n/a
39	CTCF	chr3:162760980-162761130	HEEpiC	esophagus:	n/a	n/a
40	CTCF	chr3:162761020-162761170	MCF-7	breast:	n/a	n/a
41	CTCF	chr3:162760886-162761223	T-47D	breast:	n/a	n/a
42	CTCF	chr3:162760920-162761070	HEEpiC	esophagus:	n/a	n/a
43	CTCF	chr3:162774780-162774930	A549	lung:	n/a	n/a
44	CTCF	chr3:162760962-162761122	HepG2	liver:	n/a	n/a
45	CTCF	chr3:162774800-162774950	MCF-7	breast:	n/a	n/a
46	CTCF	chr3:162774780-162774930	RPTEC	kidney:	n/a	n/a
47	CTCF	chr3:162774780-162774930	GM12873	blood:	n/a	n/a
48	CTCF	chr3:162760989-162761173	LNCaP	prostate:	n/a	n/a
49	CTCF	chr3:162774820-162774970	HVMF	connective:	n/a	n/a
50	CTCF	chr3:162777084-162777117	LNCaP	prostate:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:162705203-162705253	HEK293	kidney:	embryo
2	chr3:162705203-162705253	HEEpiC	esophagus:	n/a
3	chr3:162705427-162705477	AG04449	skin:	fetal
4	chr3:162705337-162705387	HPAEpiC	pulmonary alveolar:	n/a
5	chr3:162705427-162705477	AG04450	lung:	fetal
6	chr3:162705337-162705387	BJ	skin:	n/a
7	chr3:162705203-162705253	HCM	heart:	n/a
8	chr3:162705427-162705477	HepG2	liver:	n/a
9	chr3:162705337-162705387	GM12878	blood:	n/a
10	chr3:162705427-162705477	AG09309	skin:	n/a
11	chr3:162705203-162705253	HIPEpiC	eye:	n/a
12	chr3:162705203-162705253	SK-N-SH	brain:	n/a
13	chr3:162705337-162705387	PrEC	prostate:	n/a
14	chr3:162705203-162705253	NH-A	brain:	n/a
15	chr3:162705337-162705387	HepG2	liver:	n/a
16	chr3:162705203-162705253	SKMC	muscle:	n/a
17	chr3:162705203-162705253	Hela-S3	cervix:	n/a
18	chr3:162705427-162705477	HCM	heart:	n/a
19	chr3:162705337-162705387	K562	blood:	n/a
20	chr3:162705427-162705477	HAEpiC	amniotic membrane:	n/a
21	chr3:162705337-162705387	HAEpiC	amniotic membrane:	n/a
22	chr3:162705203-162705253	SAEC	small airway:	n/a
23	chr3:162705203-162705253	HRCEpiC	kidney:	n/a
24	chr3:162705337-162705387	RPTEC	kidney:	n/a
25	chr3:162705337-162705387	NHBE	bronchial:	n/a
26	chr3:162705203-162705253	Caco-2	colon:	n/a
27	chr3:162705427-162705477	BE2_C	brain:	n/a
28	chr3:162705203-162705253	AG09319	gingival:	n/a
29	chr3:162705337-162705387	SK-N-SH	brain:	n/a
30	chr3:162705427-162705477	HEEpiC	esophagus:	n/a
31	chr3:162705203-162705253	GM06990	blood:	n/a
32	chr3:162705337-162705387	HUVEC	blood vessel:	n/a
33	chr3:162705427-162705477	HUVEC	blood vessel:	n/a
34	chr3:162705337-162705387	HRE	kidney:	n/a
35	chr3:162705337-162705387	GM06990	blood:	n/a
36	chr3:162705427-162705477	PANC-1	pancreas:	n/a
37	chr3:162705203-162705253	IMR90	lung:	fetal
38	chr3:162705337-162705387	NH-A	brain:	n/a
39	chr3:162705427-162705477	K562	blood:	n/a
40	chr3:162705427-162705477	GM19239	blood:	n/a
41	chr3:162705427-162705477	CMK	blood:	n/a
42	chr3:162705427-162705477	HPAEpiC	pulmonary alveolar:	n/a
43	chr3:162705203-162705253	HUVEC	blood vessel:	n/a
44	chr3:162705203-162705253	SK-N-MC	brain:	n/a
45	chr3:162705337-162705387	HCT-116	colon:	n/a
46	chr3:162705427-162705477	NT2-D1	testis:	n/a
47	chr3:162705203-162705253	ovcar-3	ovarian:	n/a
48	chr3:162705337-162705387	ProgFib	skin:	n/a
49	chr3:162705203-162705253	HAEpiC	amniotic membrane:	n/a
50	chr3:162705203-162705253	A549	lung:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:162692633..162695202-chr3:162700914..162703834,2	MCF-7	breast:
2	chr3:162781747..162783965-chr3:162788037..162790015,2	MCF-7	breast:
3	chr3:162754967..162757825-chr3:162758379..162760616,2	MCF-7	breast:
4	chr3:162003324..162004086-chr3:162760294..162761113,2	MCF-7	breast:
5	chr14:60627662..60628534-chr3:162740219..162740719,2	MCF-7	breast:
6	chr3:162774576..162775267-chr3:162991199..162992106,3	MCF-7	breast:
7	chr3:162730866..162732605-chr3:162732763..162734314,2	MCF-7	breast:
8	chr3:162695238..162696118-chr5:168564460..168564967,2	MCF-7	breast:
9	chr3:162774415..162775478-chr3:163207241..163208645,5	MCF-7	breast:
10	chr3:162730866..162732605-chr3:162732763..162734314,2	MCF-7	breast:
11	chr20:11421691..11422663-chr3:162694553..162695419,2	MCF-7	breast:
12	chr3:162692633..162695202-chr3:162700914..162703834,2	MCF-7	breast:
13	chr3:162494680..162495563-chr3:162760633..162761552,3	MCF-7	breast:
14	chr3:162754967..162757825-chr3:162758379..162760616,2	MCF-7	breast:
15	chr3:162776529..162777484-chr3:163340191..163340771,2	MCF-7	breast:
16	chr3:162781747..162783965-chr3:162788037..162790015,2	MCF-7	breast:
17	chr3:162755966..162757761-chr3:162760804..162762764,2	MCF-7	breast:
18	chr3:156892021..156894345-chr3:162787273..162789725,2	MCF-7	breast:
19	chr3:162755966..162757761-chr3:162760804..162762764,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OTOL1-2	chr3:162744184-162744286	ENSG00000241168.1
2	lnc-OTOL1-2	chr3:162744184-162744286	NONHSAT093026

No data

Variant related genes	Relation type
ENSG00000241168	TF binding region
ENSG00000241168	CpG island
ENSG00000243176	chromatin interactions

Extended variants
information (count: 2795 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:2795 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs16855005	chr3:162678550-162678551	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs180695143	chr3:162678626-162678627	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs9290155	chr3:162678654-162678655	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs549936427	chr3:162678674-162678675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs548533613	chr3:162678686-162678687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs569898706	chr3:162678711-162678712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs538963378	chr3:162678725-162678726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs552235959	chr3:162678727-162678728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs16855006	chr3:162678736-162678737	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs367643986	chr3:162678741-162678742	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs534573091	chr3:162678746-162678747	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs186139340	chr3:162678756-162678757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs568108567	chr3:162678757-162678758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs191061910	chr3:162678764-162678765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534468761	chr3:162678765-162678766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs144973537	chr3:162678783-162678784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs577497453	chr3:162678836-162678837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs539730520	chr3:162678856-162678857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs553219124	chr3:162678857-162678858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs9830442	chr3:162678858-162678859	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs541779335	chr3:162678878-162678879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs562079373	chr3:162678881-162678882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs9867733	chr3:162678883-162678884	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs543280288	chr3:162678895-162678896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs183387741	chr3:162678901-162678902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs4858902	chr3:162678910-162678911	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs537870679	chr3:162678943-162678944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs12152484	chr3:162678967-162678968	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs12152310	chr3:162678993-162678994	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs528103557	chr3:162679054-162679055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs10936318	chr3:162679123-162679124	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs568112036	chr3:162679177-162679178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs376285314	chr3:162679191-162679192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs560133202	chr3:162679206-162679207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs188325414	chr3:162679209-162679210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550930420	chr3:162679226-162679227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs190808520	chr3:162679239-162679240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs10936319	chr3:162679242-162679243	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs142037394	chr3:162679271-162679272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs545737297	chr3:162679277-162679278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs146334192	chr3:162679278-162679279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs374627592	chr3:162679313-162679314	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs370703400	chr3:162679376-162679377	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs535500475	chr3:162679384-162679385	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs572836881	chr3:162679402-162679403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs555710572	chr3:162679404-162679405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575682428	chr3:162679409-162679410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs183369504	chr3:162679424-162679425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs10936320	chr3:162679425-162679426	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs144050070	chr3:162679463-162679464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-small cell lung cancer	19010865	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16547154	CNVD
Breast cancer	21364760	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	21785460	CNVD
Sudden cardiac death	19188705	CNVD
Mantle cell lymphoma	19029149	CNVD
Malformation	19546859	CNVD
Schizophrenia	19546859	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
epilepsy	18472482	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Myxofibrosarcoma	16751306	CNVD
Parkinson disease	21907011	CNVD
Bladder cancer	21909424	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:162676400-162681800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:162681800-162682400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
3	chr3:162683800-162684200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
4	chr3:162683800-162684400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
5	chr3:162690200-162692200	Enhancers	Dnd41	blood
6	chr3:162691200-162691800	Enhancers	A549	lung
7	chr3:162691800-162695400	Weak transcription	A549	lung
8	chr3:162695400-162696200	Enhancers	A549	lung
9	chr3:162702200-162702600	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr3:162702400-162702600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr3:162702400-162702800	Enhancers	Aorta	Aorta
12	chr3:162702400-162702800	Active TSS	Hela-S3	cervix
13	chr3:162702400-162703000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr3:162702600-162702800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
15	chr3:162702600-162703200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr3:162703200-162704800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
17	chr3:162704800-162707800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr3:162710600-162710800	Enhancers	Dnd41	blood
19	chr3:162710800-162711000	Weak transcription	Dnd41	blood
20	chr3:162711000-162713600	ZNF genes & repeats	Dnd41	blood
21	chr3:162713600-162714400	Weak transcription	Dnd41	blood
22	chr3:162714400-162714800	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr3:162714400-162715200	Enhancers	Dnd41	blood
24	chr3:162715200-162716400	Flanking Active TSS	Dnd41	blood
25	chr3:162715400-162716000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr3:162715400-162716200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr3:162715400-162716200	Enhancers	Colon Smooth Muscle	Colon
28	chr3:162715400-162716200	Active TSS	Duodenum Smooth Muscle	Duodenum
29	chr3:162715600-162715800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr3:162715600-162716000	Active TSS	Adipose Nuclei	Adipose
31	chr3:162715600-162716000	Active TSS	Aorta	Aorta
32	chr3:162715600-162716000	Active TSS	Rectal Mucosa Donor 29	rectum
33	chr3:162715600-162716000	Active TSS	Stomach Smooth Muscle	stomach
34	chr3:162715600-162716200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr3:162715600-162716200	Active TSS	Brain Inferior Temporal Lobe	brain
36	chr3:162715600-162716800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr3:162715800-162716000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr3:162715800-162716600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr3:162715800-162716600	Enhancers	iPS-18 Cell Line	embryonic stem cell
40	chr3:162716000-162716200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr3:162716000-162716200	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr3:162716200-162716400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr3:162716200-162716600	Enhancers	Rectal Mucosa Donor 29	rectum
44	chr3:162716400-162718000	Enhancers	Dnd41	blood
45	chr3:162724800-162725600	Enhancers	Dnd41	blood
46	chr3:162735400-162745200	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr3:162735600-162736400	Enhancers	Fetal Heart	heart
48	chr3:162736600-162737400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr3:162741000-162765600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr3:162745200-162745600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links