Variant report

Variant	nsv877824
Chromosome Location	chr3:163620918-163728076
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:543)
CpG islands
(count:366)
Chromatin interactive
region (count:23)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:543 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BRCA1	chr3:163722192-163722316	H1-hESC	embryonic stem cell:	n/a	n/a
2	CEBPB	chr3:163637008-163637304	A549	lung:	n/a	chr3:163637142-163637153
3	CEBPB	chr3:163636925-163637363	MCF-7	breast:	n/a	chr3:163637142-163637153
4	CEBPB	chr3:163636968-163637322	IMR90	lung:	n/a	chr3:163637142-163637153
5	CEBPB	chr3:163637047-163637323	H1-hESC	embryonic stem cell:	n/a	chr3:163637142-163637153
6	CEBPB	chr3:163722123-163722274	H1-hESC	embryonic stem cell:	n/a	n/a
7	CEBPB	chr3:163636959-163637331	HepG2	liver:	n/a	chr3:163637142-163637153
8	CEBPB	chr3:163636953-163637335	Hela-S3	cervix:	n/a	chr3:163637142-163637153
9	CEBPB	chr3:163637042-163637289	K562	blood:	n/a	chr3:163637142-163637153
10	CEBPB	chr3:163636991-163637415	MCF-7	breast:	n/a	chr3:163637142-163637153
11	CEBPB	chr3:163657645-163657992	MCF-7	breast:	n/a	n/a
12	CEBPB	chr3:163651011-163651032	K562	blood:	n/a	n/a
13	CEBPB	chr3:163650778-163651258	MCF-7	breast:	n/a	n/a
14	CEBPB	chr3:163632505-163632852	H1-hESC	embryonic stem cell:	n/a	n/a
15	CHD2	chr3:163722101-163722388	H1-hESC	embryonic stem cell:	n/a	n/a
16	CTCF	chr3:163634760-163634910	HepG2	liver:	n/a	n/a
17	CTCF	chr3:163634740-163634890	NB4	blood:	n/a	n/a
18	CTCF	chr3:163722086-163722401	H1-hESC	embryonic stem cell:	n/a	chr3:163722244-163722257
19	CTCF	chr3:163674999-163675163	MCF-7	breast:	n/a	n/a
20	CTCF	chr3:163669320-163669470	HCPEpiC	choroid plexus:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
21	CTCF	chr3:163634709-163634800	MCF-7	breast:	n/a	n/a
22	CTCF	chr3:163669314-163669473	MCF-7	breast:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
23	CTCF	chr3:163634740-163634890	WERI-Rb-1	eye:	n/a	n/a
24	CTCF	chr3:163634722-163634887	HepG2	liver:	n/a	n/a
25	CTCF	chr3:163722146-163722360	H1-hESC	embryonic stem cell:	n/a	chr3:163722244-163722257
26	CTCF	chr3:163669301-163669410	SK-N-SH_RA	brain:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
27	CTCF	chr3:163657906-163658126	MCF-7	breast:	n/a	n/a
28	CTCF	chr3:163657900-163658050	HepG2	liver:	n/a	n/a
29	CTCF	chr3:163669340-163669490	HA-sp	spinal cord:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
30	CTCF	chr3:163722250-163722265	MCF-7	breast:	n/a	n/a
31	CTCF	chr3:163722178-163722338	K562	blood:	n/a	chr3:163722244-163722257
32	CTCF	chr3:163722154-163722352	K562	blood:	n/a	chr3:163722244-163722257
33	CTCF	chr3:163657954-163658082	Gliobla	brain:	n/a	n/a
34	CTCF	chr3:163634616-163634947	HepG2	liver:	n/a	n/a
35	CTCF	chr3:163684720-163684870	BE2_C	brain:	n/a	n/a
36	CTCF	chr3:163634703-163634904	LNCaP	prostate:	n/a	n/a
37	CTCF	chr3:163634700-163634850	GM12878	blood:	n/a	n/a
38	CTCF	chr3:163722040-163722190	HCT-116	colon:	n/a	n/a
39	CTCF	chr3:163657920-163658070	HPAF	blood vessel:	n/a	n/a
40	CTCF	chr3:163669280-163669430	HEEpiC	esophagus:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
41	CTCF	chr3:163669310-163669434	HUVEC	blood vessel:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
42	CTCF	chr3:163657900-163658050	RPTEC	kidney:	n/a	n/a
43	CTCF	chr3:163669220-163669370	HMF	breast:	n/a	n/a
44	CTCF	chr3:163669280-163669430	GM12866	blood:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
45	CTCF	chr3:163669340-163669449	K562	blood:	n/a	chr3:163669376-163669394 chr3:163669377-163669393 chr3:163669371-163669392
46	CTCF	chr3:163634720-163634870	AG09319	gingival:	n/a	n/a
47	CTCF	chr3:163634800-163634950	GM12878	blood:	n/a	n/a
48	CTCF	chr3:163634760-163634910	MCF-7	breast:	n/a	n/a
49	CTCF	chr3:163634591-163634915	Medullo	brain:	n/a	n/a
50	CTCF	chr3:163706280-163706430	AG04450	lung:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:163722208-163722258	HEEpiC	esophagus:	n/a
2	chr3:163632090-163632140	MCF-7	breast:	n/a
3	chr3:163719428-163719478	SK-N-SH	brain:	n/a
4	chr3:163722294-163722344	HCPEpiC	choroid plexus:	n/a
5	chr3:163719236-163719286	HRCEpiC	kidney:	n/a
6	chr3:163632090-163632140	HRPEpiC	eye:	n/a
7	chr3:163719428-163719478	HPAEpiC	pulmonary alveolar:	n/a
8	chr3:163722208-163722258	SK-N-SH_RA	brain:	n/a
9	chr3:163632090-163632140	NHDF-neo	bronchial:	n/a
10	chr3:163632090-163632140	PANC-1	pancreas:	n/a
11	chr3:163632090-163632140	K562	blood:	n/a
12	chr3:163719236-163719286	U87	brain:	n/a
13	chr3:163722051-163722101	NHBE	bronchial:	n/a
14	chr3:163719236-163719286	HRPEpiC	eye:	n/a
15	chr3:163719236-163719286	HCF	heart:	n/a
16	chr3:163722294-163722344	A549	lung:	n/a
17	chr3:163719428-163719478	PFSK-1	brain:	n/a
18	chr3:163719428-163719478	SK-N-MC	brain:	n/a
19	chr3:163719428-163719478	GM12891	blood:	n/a
20	chr3:163719236-163719286	MCF10A-Er-Src	breast:	n/a
21	chr3:163632090-163632140	PFSK-1	brain:	n/a
22	chr3:163719236-163719286	GM06990	blood:	n/a
23	chr3:163722051-163722101	HRE	kidney:	n/a
24	chr3:163722051-163722101	NH-A	brain:	n/a
25	chr3:163722294-163722344	SK-N-SH_RA	brain:	n/a
26	chr3:163719428-163719478	HCT-116	colon:	n/a
27	chr3:163722051-163722101	HL-60	blood:	n/a
28	chr3:163722051-163722101	SK-N-SH	brain:	n/a
29	chr3:163719428-163719478	HCF	heart:	n/a
30	chr3:163722208-163722258	Caco-2	colon:	n/a
31	chr3:163632090-163632140	HCPEpiC	choroid plexus:	n/a
32	chr3:163722294-163722344	Jurkat	blood:	n/a
33	chr3:163722294-163722344	SKMC	muscle:	n/a
34	chr3:163722051-163722101	U87	brain:	n/a
35	chr3:163722294-163722344	ECC-1	luminal epithelium:	n/a
36	chr3:163722208-163722258	HCM	heart:	n/a
37	chr3:163632090-163632140	AG09309	skin:	n/a
38	chr3:163719428-163719478	AG04449	skin:	fetal
39	chr3:163719236-163719286	HL-60	blood:	n/a
40	chr3:163632090-163632140	MCF10A-Er-Src	breast:	n/a
41	chr3:163722294-163722344	AG09309	skin:	n/a
42	chr3:163719236-163719286	LNCaP	prostate:	n/a
43	chr3:163722051-163722101	HepG2	liver:	n/a
44	chr3:163722294-163722344	PFSK-1	brain:	n/a
45	chr3:163722294-163722344	NH-A	brain:	n/a
46	chr3:163719236-163719286	AG09309	skin:	n/a
47	chr3:163719428-163719478	ovcar-3	ovarian:	n/a
48	chr3:163719428-163719478	H1-hESC	embryonic stem cell:	embryo
49	chr3:163719236-163719286	HMEC	breast:	n/a
50	chr3:163722294-163722344	SK-N-SH	brain:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:163664276..163666199-chr3:163667456..163669439,2	MCF-7	breast:
2	chr3:163674728..163675758-chr3:164903457..164904093,3	MCF-7	breast:
3	chr1:219388883..219389633-chr3:163652052..163652630,2	MCF-7	breast:
4	chr3:163634067..163635345-chr3:163668973..163669822,4	MCF-7	breast:
5	chr3:163639118..163640834-chr3:163641183..163642713,2	MCF-7	breast:
6	chr3:163639924..163641654-chr3:163663861..163665823,2	MCF-7	breast:
7	chr3:163676571..163679360-chr3:163699055..163700602,2	MCF-7	breast:
8	chr3:163639924..163641654-chr3:163663861..163665823,2	MCF-7	breast:
9	chr3:163219408..163221189-chr3:163663438..163665910,2	K562	blood:
10	chr3:163503157..163504078-chr3:163634240..163634926,2	MCF-7	breast:
11	chr3:163647521..163649115-chr3:163652164..163654381,2	MCF-7	breast:
12	chr3:163674674..163675466-chr3:164524045..164524647,3	MCF-7	breast:
13	chr3:163639118..163640834-chr3:163641183..163642713,2	MCF-7	breast:
14	chr3:163669046..163669790-chr3:164903266..164903861,2	MCF-7	breast:
15	chr3:163660440..163662829-chr3:163666000..163668542,2	K562	blood:
16	chr3:163497409..163497997-chr3:163668939..163669921,2	MCF-7	breast:
17	chr3:163664276..163666199-chr3:163667456..163669439,2	MCF-7	breast:
18	chr3:163689823..163692046-chr3:163703767..163706359,2	K562	blood:
19	chr3:163634067..163635345-chr3:163668973..163669822,4	MCF-7	breast:
20	chr3:163660440..163662829-chr3:163666000..163668542,2	K562	blood:
21	chr3:163676571..163679360-chr3:163699055..163700602,2	MCF-7	breast:
22	chr3:163689823..163692046-chr3:163703767..163706359,2	K562	blood:
23	chr3:163647521..163649115-chr3:163652164..163654381,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SI-6	chr3:163719394-163720253	NONHSAT093045

No data

Variant related genes	Relation type
ENSG00000214210	TF binding region
ENSG00000214210	CpG island

Extended variants
information (count: 2125 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:2125 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs553934175	chr3:163622013-163622014	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs145563443	chr3:163622015-163622016	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs542687968	chr3:163622061-163622062	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs562503573	chr3:163622062-163622063	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs369315903	chr3:163622071-163622072	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs575903734	chr3:163622078-163622079	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs373911493	chr3:163622081-163622082	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs537157840	chr3:163622082-163622083	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs565406408	chr3:163622084-163622085	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs146778427	chr3:163622090-163622091	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs371658086	chr3:163622092-163622093	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs571726587	chr3:163622101-163622102	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs561080824	chr3:163622119-163622120	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs530129461	chr3:163622149-163622150	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs2759214	chr3:163622198-163622199	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs78977189	chr3:163622201-163622202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs140528719	chr3:163622209-163622210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs2639574	chr3:163622235-163622236	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs571425953	chr3:163622268-163622269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs150425295	chr3:163622326-163622327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs189820566	chr3:163622329-163622330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs138234694	chr3:163622358-163622359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs536358201	chr3:163622366-163622367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs577492118	chr3:163622372-163622373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs182400667	chr3:163622433-163622434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs544873895	chr3:163622449-163622450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs186152671	chr3:163622513-163622514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs531042813	chr3:163622537-163622538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs565600254	chr3:163622545-163622546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs572390856	chr3:163622547-163622548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs76329934	chr3:163622590-163622591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs13074466	chr3:163622617-163622618	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs188224287	chr3:163622623-163622624	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs530486908	chr3:163622660-163622661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs73024981	chr3:163622671-163622672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550264530	chr3:163622674-163622675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs180975564	chr3:163622696-163622697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs7612324	chr3:163622726-163622727	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs552269568	chr3:163622731-163622732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs371071667	chr3:163622745-163622746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs185006083	chr3:163622792-163622793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs549369165	chr3:163622819-163622820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs534079705	chr3:163622842-163622843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs2700315	chr3:163622874-163622875	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
45	rs2758360	chr3:163622875-163622876	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs536420531	chr3:163622919-163622920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs547995663	chr3:163622956-163622957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs556247240	chr3:163623009-163623010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs576034881	chr3:163623085-163623086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs527546055	chr3:163623090-163623091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-small cell lung cancer	19010865	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16547154	CNVD
Breast cancer	21364760	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	21785460	CNVD
Sudden cardiac death	19188705	CNVD
Mantle cell lymphoma	19029149	CNVD
Malformation	19546859	CNVD
Schizophrenia	19546859	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
epilepsy	18472482	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Myxofibrosarcoma	16751306	CNVD
Parkinson disease	21907011	CNVD
Bladder cancer	21909424	CNVD
Glioblastoma multiforme	21138945	CNVD
Cancer	20164919	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:163622000-163622200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr3:163622200-163623400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr3:163623400-163624600	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr3:163623600-163624200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr3:163623800-163624400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr3:163623800-163624600	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr3:163624200-163625200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr3:163624400-163625800	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr3:163624600-163625200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr3:163625200-163625400	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr3:163625200-163628400	Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chr3:163625800-163626600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
13	chr3:163626200-163627000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
14	chr3:163626600-163627600	Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr3:163627000-163631800	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr3:163627600-163631800	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr3:163627800-163631800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr3:163628200-163628400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
19	chr3:163628400-163629800	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
20	chr3:163628400-163631800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr3:163629400-163629600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr3:163629600-163630200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr3:163629800-163631000	Active TSS	iPS-18 Cell Line	embryonic stem cell
24	chr3:163630200-163630800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr3:163630400-163630800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr3:163630600-163630800	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr3:163630800-163631800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr3:163630800-163631800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr3:163631000-163631800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
30	chr3:163631800-163632000	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr3:163631800-163632000	Active TSS	iPS-20b Cell Line	embryonic stem cell
32	chr3:163631800-163632200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr3:163631800-163632200	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr3:163631800-163632200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr3:163631800-163632800	Enhancers	HUES6 Cell Line	embryonic stem cell
36	chr3:163631800-163632800	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr3:163631800-163633000	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr3:163631800-163633000	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
39	chr3:163632000-163632200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
40	chr3:163632000-163632400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
41	chr3:163632000-163633200	Enhancers	H1 Cell Line	embryonic stem cell
42	chr3:163632200-163632800	Enhancers	iPS-20b Cell Line	embryonic stem cell
43	chr3:163632200-163638200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr3:163632400-163632800	Enhancers	HUES48 Cell Line	embryonic stem cell
45	chr3:163632600-163632800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr3:163633000-163633200	Genic enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr3:163633200-163638200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
48	chr3:163638200-163638400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
49	chr3:163638200-163642400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
50	chr3:163642000-163642600	Enhancers	iPS-20b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links