Variant report

Variant	nsv880584
Chromosome Location	chr4:175505749-175644689
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1173)
CpG islands
(count:122)
Chromatin interactive
region (count:67)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1173 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:175578475-175580000	K562	blood:	n/a	chr4:175578965-175578981 chr4:175579194-175579210 chr4:175578964-175578980 chr4:175579918-175579934 chr4:175579193-175579209
2	ARID3A	chr4:175553307-175553683	K562	blood:	n/a	n/a
3	ARID3A	chr4:175553430-175553530	HepG2	liver:	n/a	n/a
4	ARID3A	chr4:175584258-175584364	K562	blood:	n/a	n/a
5	ARID3A	chr4:175635473-175636146	K562	blood:	n/a	n/a
6	ARID3A	chr4:175602416-175603564	K562	blood:	n/a	n/a
7	ARID3A	chr4:175591539-175591547	K562	blood:	n/a	n/a
8	ARID3A	chr4:175590494-175590824	K562	blood:	n/a	n/a
9	ARID3A	chr4:175620840-175621250	K562	blood:	n/a	n/a
10	ARID3A	chr4:175607831-175607956	K562	blood:	n/a	n/a
11	ARID3A	chr4:175575732-175576190	K562	blood:	n/a	n/a
12	ATF1	chr4:175525425-175525757	K562	blood:	n/a	n/a
13	ATF1	chr4:175575812-175576166	K562	blood:	n/a	n/a
14	ATF1	chr4:175602698-175603414	K562	blood:	n/a	n/a
15	ATF2	chr4:175628423-175628786	GM12878	blood:	n/a	n/a
16	ATF2	chr4:175628399-175628814	GM12878	blood:	n/a	n/a
17	ATF3	chr4:175579445-175579760	K562	blood:	n/a	n/a
18	ATF3	chr4:175602847-175603419	K562	blood:	n/a	n/a
19	ATF3	chr4:175514092-175514451	K562	blood:	n/a	n/a
20	BACH1	chr4:175557051-175557143	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr4:175508895-175508986	K562	blood:	n/a	n/a
22	BACH1	chr4:175602935-175603320	K562	blood:	n/a	n/a
23	BATF	chr4:175628448-175628768	GM12878	blood:	n/a	chr4:175628586-175628597
24	BATF	chr4:175628429-175628725	GM12878	blood:	n/a	chr4:175628586-175628597
25	BATF	chr4:175512809-175512975	GM12878	blood:	n/a	n/a
26	BCL11A	chr4:175628456-175628746	GM12878	blood:	n/a	n/a
27	BCL3	chr4:175602801-175603436	K562	blood:	n/a	n/a
28	BCL3	chr4:175628497-175628798	GM12878	blood:	n/a	n/a
29	BCL3	chr4:175590339-175590884	A549	lung:	n/a	n/a
30	BCLAF1	chr4:175602873-175603444	K562	blood:	n/a	n/a
31	BHLHE40	chr4:175506658-175506738	K562	blood:	n/a	n/a
32	BHLHE40	chr4:175607627-175607877	K562	blood:	n/a	n/a
33	BHLHE40	chr4:175575836-175576142	K562	blood:	n/a	n/a
34	BHLHE40	chr4:175635638-175635909	GM12878	blood:	n/a	n/a
35	BHLHE40	chr4:175514125-175514469	K562	blood:	n/a	n/a
36	BHLHE40	chr4:175602717-175603433	K562	blood:	n/a	n/a
37	CBX3	chr4:175610850-175611093	K562	blood:	n/a	n/a
38	CBX3	chr4:175602786-175603469	K562	blood:	n/a	n/a
39	CBX3	chr4:175590390-175591036	K562	blood:	n/a	n/a
40	CBX3	chr4:175611650-175612422	K562	blood:	n/a	n/a
41	CBX3	chr4:175514082-175514493	K562	blood:	n/a	n/a
42	CBX3	chr4:175602526-175603577	K562	blood:	n/a	n/a
43	CBX3	chr4:175579217-175579765	K562	blood:	n/a	n/a
44	CBX3	chr4:175532915-175533217	K562	blood:	n/a	n/a
45	CBX3	chr4:175611741-175612368	K562	blood:	n/a	n/a
46	CBX3	chr4:175532961-175533261	K562	blood:	n/a	n/a
47	CBX3	chr4:175575729-175576202	K562	blood:	n/a	n/a
48	CCNT2	chr4:175575846-175576121	K562	blood:	n/a	chr4:175576028-175576037
49	CCNT2	chr4:175539171-175539445	K562	blood:	n/a	n/a
50	CCNT2	chr4:175579556-175579764	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:175527947-175527997	HEK293	kidney:	embryo
2	chr4:175635801-175635851	GM12891	blood:	n/a
3	chr4:175635801-175635851	IMR90	lung:	fetal
4	chr4:175527947-175527997	NB4	blood:	n/a
5	chr4:175635801-175635851	MCF10A-Er-Src	breast:	n/a
6	chr4:175635801-175635851	GM12878	blood:	n/a
7	chr4:175635801-175635851	HEK293	kidney:	embryo
8	chr4:175527947-175527997	SAEC	small airway:	n/a
9	chr4:175635801-175635851	Caco-2	colon:	n/a
10	chr4:175635801-175635851	HRCEpiC	kidney:	n/a
11	chr4:175527947-175527997	SK-N-MC	brain:	n/a
12	chr4:175635801-175635851	AG09309	skin:	n/a
13	chr4:175635801-175635851	GM06990	blood:	n/a
14	chr4:175635801-175635851	NHBE	bronchial:	n/a
15	chr4:175527947-175527997	HepG2	liver:	n/a
16	chr4:175635801-175635851	HIPEpiC	eye:	n/a
17	chr4:175635801-175635851	HUVEC	blood vessel:	n/a
18	chr4:175527947-175527997	HRCEpiC	kidney:	n/a
19	chr4:175527947-175527997	LNCaP	prostate:	n/a
20	chr4:175635801-175635851	CMK	blood:	n/a
21	chr4:175635801-175635851	A549	lung:	n/a
22	chr4:175527947-175527997	CMK	blood:	n/a
23	chr4:175635801-175635851	Hela-S3	cervix:	n/a
24	chr4:175635801-175635851	HPAEpiC	pulmonary alveolar:	n/a
25	chr4:175527947-175527997	BE2_C	brain:	n/a
26	chr4:175527947-175527997	GM12892	blood:	n/a
27	chr4:175635801-175635851	SK-N-SH	brain:	n/a
28	chr4:175527947-175527997	AG09309	skin:	n/a
29	chr4:175527947-175527997	H1-hESC	embryonic stem cell:	embryo
30	chr4:175527947-175527997	AG04449	skin:	fetal
31	chr4:175527947-175527997	HEEpiC	esophagus:	n/a
32	chr4:175527947-175527997	HCPEpiC	choroid plexus:	n/a
33	chr4:175527947-175527997	SK-N-SH_RA	brain:	n/a
34	chr4:175527947-175527997	T-47D	breast:	n/a
35	chr4:175527947-175527997	GM06990	blood:	n/a
36	chr4:175635801-175635851	HRE	kidney:	n/a
37	chr4:175527947-175527997	GM12878	blood:	n/a
38	chr4:175635801-175635851	PrEC	prostate:	n/a
39	chr4:175635801-175635851	MCF-7	breast:	n/a
40	chr4:175635801-175635851	HCT-116	colon:	n/a
41	chr4:175527947-175527997	BJ	skin:	n/a
42	chr4:175527947-175527997	IMR90	lung:	fetal
43	chr4:175527947-175527997	HIPEpiC	eye:	n/a
44	chr4:175527947-175527997	HCT-116	colon:	n/a
45	chr4:175635801-175635851	SKMC	muscle:	n/a
46	chr4:175635801-175635851	AG04450	lung:	fetal
47	chr4:175635801-175635851	AoSMC	blood vessel:	n/a
48	chr4:175527947-175527997	MCF-7	breast:	n/a
49	chr4:175527947-175527997	SK-N-SH	brain:	n/a
50	chr4:175527947-175527997	HUVEC	blood vessel:	n/a

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr4:175385505..175387485-chr4:175568207..175570960,2	MCF-7	breast:
2	chr4:175559277..175561668-chr4:175561913..175563916,2	K562	blood:
3	chr4:175341767..175344655-chr4:175574343..175576640,2	K562	blood:
4	chr4:175572610..175575393-chr4:175581284..175583199,3	K562	blood:
5	chr4:175584368..175588470-chr4:175592629..175595623,3	K562	blood:
6	chr4:175512708..175515065-chr4:175517080..175519452,2	K562	blood:
7	chr4:175583115..175586300-chr4:175586507..175590901,4	K562	blood:
8	chr4:175601769..175605702-chr4:175608830..175610744,3	K562	blood:
9	chr4:175634641..175636436-chr4:175640202..175641924,2	K562	blood:
10	chr4:175593713..175596490-chr4:175597465..175599520,2	K562	blood:
11	chr4:175547041..175549414-chr4:175550362..175552993,2	K562	blood:
12	chr4:175205083..175207334-chr4:175600314..175601939,2	K562	blood:
13	chr4:175554212..175556031-chr4:175556828..175559227,2	K562	blood:
14	chr4:175533943..175535953-chr4:175558872..175561336,2	K562	blood:
15	chr4:175644373..175645949-chr4:175653690..175656140,2	K562	blood:
16	chr4:175570201..175571721-chr4:175574624..175576843,2	K562	blood:
17	chr4:175553006..175553908-chr4:175635224..175636171,3	MCF-7	breast:
18	chr4:175584368..175588470-chr4:175592629..175595623,3	K562	blood:
19	chr4:175602454..175607122-chr4:175607186..175610908,5	K562	blood:
20	chr4:175583115..175586300-chr4:175586507..175590901,4	K562	blood:
21	chr4:175505435..175507439-chr4:175508073..175510224,2	K562	blood:
22	chr4:175196583..175199350-chr4:175586239..175588239,2	K562	blood:
23	chr4:175513163..175515065-chr4:175517080..175519428,2	K562	blood:
24	chr4:175576888..175581364-chr4:175581452..175587240,5	K562	blood:
25	chr4:175576647..175578293-chr4:175595478..175597659,2	K562	blood:
26	chr4:175246118..175249047-chr4:175551660..175553863,2	K562	blood:
27	chr4:175601769..175605702-chr4:175608830..175610744,3	K562	blood:
28	chr4:175626881..175629090-chr4:175631041..175633038,2	K562	blood:
29	chr4:175520125..175523086-chr4:175535315..175537351,2	MCF-7	breast:
30	chr4:175593713..175596490-chr4:175597465..175599520,2	K562	blood:
31	chr4:175576888..175581364-chr4:175581452..175587240,5	K562	blood:
32	chr4:175576679..175579556-chr4:175592128..175594064,2	K562	blood:
33	chr4:175626881..175629090-chr4:175631041..175633038,2	K562	blood:
34	chr4:175583115..175586300-chr4:175586507..175590901,3	K562	blood:
35	chr4:175583115..175586300-chr4:175586507..175590901,3	K562	blood:
36	chr4:175597348..175599819-chr4:175602946..175605141,2	K562	blood:
37	chr4:175512708..175515065-chr4:175517080..175519452,2	K562	blood:
38	chr4:175634568..175636436-chr4:175640202..175642799,3	K562	blood:
39	chr4:175630486..175632356-chr4:175634505..175637606,3	K562	blood:
40	chr4:175576647..175578293-chr4:175595478..175597659,2	K562	blood:
41	chr4:175547041..175549414-chr4:175550362..175552993,2	K562	blood:
42	chr4:175515804..175518399-chr4:175522390..175524783,2	K562	blood:
43	chr4:175521782..175524455-chr4:175541402..175543180,2	K562	blood:
44	chr4:175515804..175518399-chr4:175522390..175524783,2	K562	blood:
45	chr4:175513163..175515065-chr4:175517080..175519428,2	K562	blood:
46	chr4:175570201..175571721-chr4:175574624..175576843,2	K562	blood:
47	chr4:175576679..175579556-chr4:175592128..175594064,2	K562	blood:
48	chr4:175572822..175575961-chr4:175576391..175579522,4	K562	blood:
49	chr4:175505435..175507439-chr4:175508073..175510224,2	K562	blood:
50	chr4:175559277..175561668-chr4:175561913..175563916,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HPGD-3	chr4:175634740-175634924	NONHSAT099324
2	lnc-HPGD-3	chr4:175633666-175633946	NONHSAT099324

No data

Variant related genes	Relation type
GLRA3	TF binding region
GLRA3	CpG island
ENSG00000164118	chromatin interactions
ENSG00000145451	chromatin interactions
ENSG00000164117	chromatin interactions

Extended variants
information (count: 4148 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:4148 , 50 per page) page: 1 2 3 4 5 6 7 ... 83

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10866372	chr4:175505749-175505750	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs545379687	chr4:175505764-175505765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs565618616	chr4:175505774-175505775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs527963961	chr4:175505786-175505787	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs528208155	chr4:175505803-175505804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs571092672	chr4:175505849-175505850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs183524376	chr4:175505937-175505938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs200250917	chr4:175505948-175505949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs188473202	chr4:175505949-175505950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs529831814	chr4:175505957-175505958	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs547858970	chr4:175505991-175505992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs549863491	chr4:175506104-175506105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs576789460	chr4:175506121-175506122	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs532140033	chr4:175506123-175506124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs538875204	chr4:175506124-175506125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs552079486	chr4:175506140-175506141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs565996688	chr4:175506180-175506181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs192728793	chr4:175506186-175506187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs183920488	chr4:175506262-175506263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs2555647	chr4:175506300-175506301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs186750229	chr4:175506305-175506306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs536354763	chr4:175506333-175506334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs191265780	chr4:175506347-175506348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs565179804	chr4:175506352-175506353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs576124763	chr4:175506424-175506425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs147827298	chr4:175506468-175506469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140367996	chr4:175506509-175506510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs572721094	chr4:175506519-175506520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs184841665	chr4:175506541-175506542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs62332218	chr4:175506593-175506594	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs13130070	chr4:175506668-175506669	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs2859517	chr4:175506687-175506688	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs543441029	chr4:175506715-175506716	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs374059861	chr4:175506724-175506725	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs35943753	chr4:175506761-175506762	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs563416516	chr4:175506781-175506782	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs532091237	chr4:175506827-175506828	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs371651614	chr4:175506872-175506873	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs933952	chr4:175506878-175506879	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs13130669	chr4:175506885-175506886	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs190416324	chr4:175506894-175506895	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs36068374	chr4:175506897-175506898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs62332219	chr4:175506924-175506925	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs548040116	chr4:175506929-175506930	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs567324921	chr4:175506932-175506933	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs536293379	chr4:175506938-175506939	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs77809714	chr4:175506943-175506944	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs35892826	chr4:175506944-175506945	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs78389765	chr4:175506946-175506947	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs556129791	chr4:175506950-175506951	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Wilms tumour	21544195	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	16272173	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	21785460	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21633010	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20581869	CNVD
Hepatocellular carcinoma	16750200	CNVD
abnormal development	18461090	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Neuroblastoma	16790693	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16774939	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	22127048	CNVD
Glioblastoma multiforme	22286061	CNVD
Neuroblastoma	21899760	CNVD
Gastric adenocarcinoma	19115996	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Prostate cancer	22341455	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:495 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:175501000-175512600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:175502400-175513400	Weak transcription	NHDF-Ad	bronchial
3	chr4:175503600-175506800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr4:175504600-175506600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr4:175506600-175507000	Enhancers	Spleen	Spleen
6	chr4:175506600-175507200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr4:175506800-175507200	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr4:175506800-175507200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr4:175507200-175510600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr4:175507200-175510600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr4:175509000-175509200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
12	chr4:175510600-175510800	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr4:175510600-175512000	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr4:175510600-175513200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr4:175510800-175511200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr4:175510800-175511800	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr4:175510800-175512400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr4:175510800-175512400	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr4:175511000-175512800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr4:175511200-175512000	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr4:175511200-175512800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr4:175511400-175511600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
23	chr4:175511600-175512400	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr4:175511600-175512400	Enhancers	Primary T cells from cord blood	blood
25	chr4:175511600-175512600	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr4:175511600-175512600	Enhancers	Primary neutrophils fromperipheralblood	blood
27	chr4:175511600-175512600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
28	chr4:175511600-175515600	Enhancers	Primary hematopoietic stem cells short term culture	blood
29	chr4:175512000-175512200	Enhancers	Monocytes-CD14+_RO01746	blood
30	chr4:175512000-175515600	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr4:175512000-175516200	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr4:175512200-175512400	Enhancers	Primary B cells from cord blood	blood
33	chr4:175512200-175512400	Enhancers	Primary hematopoietic stem cells	blood
34	chr4:175512200-175512800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
35	chr4:175512200-175513800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
36	chr4:175512200-175514800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr4:175512400-175512600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr4:175512400-175512800	Flanking Active TSS	Primary T cells from cord blood	blood
39	chr4:175512400-175512800	Flanking Active TSS	Primary hematopoietic stem cells	blood
40	chr4:175512400-175513000	Flanking Active TSS	Primary B cells from cord blood	blood
41	chr4:175512400-175513000	Enhancers	Stomach Mucosa	stomach
42	chr4:175512400-175514200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr4:175512600-175512800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr4:175512600-175513000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
45	chr4:175512600-175513400	Enhancers	Primary B cells from peripheral blood	blood
46	chr4:175512600-175513400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
47	chr4:175512600-175514200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr4:175512800-175513000	Enhancers	K562	blood
49	chr4:175512800-175513600	Enhancers	Primary T cells from cord blood	blood
50	chr4:175512800-175514200	Weak transcription	Primary hematopoietic stem cells	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links