Variant report

Variant	nsv883391
Chromosome Location	chr6:2282747-2507448
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1653)
CpG islands
(count:1224)
Chromatin interactive
region (count:81)
LncRNA
region (count:125)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1653 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:2354111-2354550	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:2354162-2354475	K562	blood:	n/a	n/a
3	ARID3A	chr6:2293538-2293631	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:2504252-2504713	HepG2	liver:	n/a	n/a
5	ATF1	chr6:2449093-2449530	K562	blood:	n/a	n/a
6	ATF1	chr6:2506021-2506096	K562	blood:	n/a	n/a
7	ATF2	chr6:2448968-2449569	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr6:2449106-2449597	K562	blood:	n/a	chr6:2449420-2449427 chr6:2449420-2449428 chr6:2449420-2449430 chr6:2449417-2449430 chr6:2449417-2449427 chr6:2449416-2449429 chr6:2449417-2449427 chr6:2449417-2449430 chr6:2449418-2449429 chr6:2449418-2449431 chr6:2449420-2449431 chr6:2449419-2449427 chr6:2449420-2449430 chr6:2449419-2449430 chr6:2449416-2449431
9	BATF	chr6:2387834-2388054	GM12878	blood:	n/a	chr6:2387979-2387990
10	BCL11A	chr6:2310374-2310685	GM12878	blood:	n/a	n/a
11	BCL3	chr6:2504249-2504689	A549	lung:	n/a	n/a
12	BCL3	chr6:2504235-2504688	A549	lung:	n/a	n/a
13	BHLHE40	chr6:2354172-2354385	K562	blood:	n/a	n/a
14	BHLHE40	chr6:2459548-2459580	K562	blood:	n/a	n/a
15	BHLHE40	chr6:2471697-2472079	HepG2	liver:	n/a	n/a
16	BHLHE40	chr6:2449207-2449360	K562	blood:	n/a	n/a
17	BHLHE40	chr6:2471757-2471984	HepG2	liver:	n/a	n/a
18	BHLHE40	chr6:2370007-2370209	K562	blood:	n/a	n/a
19	BRCA1	chr6:2316936-2316962	GM12878	blood:	n/a	n/a
20	BRCA1	chr6:2449010-2449416	H1-hESC	embryonic stem cell:	n/a	n/a
21	BRCA1	chr6:2476493-2476920	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr6:2467452-2467460	GM12878	blood:	n/a	n/a
23	BRCA1	chr6:2352445-2352586	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr6:2354106-2354438	H1-hESC	embryonic stem cell:	n/a	n/a
25	CBX3	chr6:2482995-2483387	K562	blood:	n/a	n/a
26	CBX3	chr6:2327866-2328132	K562	blood:	n/a	n/a
27	CBX3	chr6:2482896-2483369	HCT-116	colon:	n/a	n/a
28	CBX3	chr6:2482942-2483484	HCT-116	colon:	n/a	n/a
29	CBX3	chr6:2327854-2328217	HCT-116	colon:	n/a	n/a
30	CBX3	chr6:2433971-2434832	HCT-116	colon:	n/a	n/a
31	CBX3	chr6:2378449-2378935	HCT-116	colon:	n/a	n/a
32	CBX3	chr6:2327861-2328152	K562	blood:	n/a	n/a
33	CBX3	chr6:2483062-2483348	K562	blood:	n/a	n/a
34	CEBPB	chr6:2503025-2503247	HepG2	liver:	n/a	chr6:2503131-2503144 chr6:2503132-2503143
35	CEBPB	chr6:2361489-2361684	K562	blood:	n/a	chr6:2361623-2361634 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361622-2361635 chr6:2361624-2361633
36	CEBPB	chr6:2502912-2503298	MCF-7	breast:	n/a	chr6:2503131-2503144 chr6:2503132-2503143
37	CEBPB	chr6:2361456-2361834	ECC-1	luminal epithelium:	n/a	chr6:2361623-2361634 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361622-2361635 chr6:2361624-2361633
38	CEBPB	chr6:2413896-2414069	H1-hESC	embryonic stem cell:	n/a	chr6:2413967-2413978
39	CEBPB	chr6:2379165-2379709	IMR90	lung:	n/a	n/a
40	CEBPB	chr6:2501871-2502128	A549	lung:	n/a	chr6:2502014-2502025
41	CEBPB	chr6:2440082-2440328	HepG2	liver:	n/a	chr6:2440160-2440171
42	CEBPB	chr6:2413789-2414096	K562	blood:	n/a	chr6:2413967-2413978
43	CEBPB	chr6:2361433-2361822	K562	blood:	n/a	chr6:2361623-2361634 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361622-2361635 chr6:2361624-2361633
44	CEBPB	chr6:2501965-2502174	K562	blood:	n/a	chr6:2502014-2502025
45	CEBPB	chr6:2321035-2321181	HepG2	liver:	n/a	chr6:2321127-2321138
46	CEBPB	chr6:2502955-2503320	H1-hESC	embryonic stem cell:	n/a	chr6:2503131-2503144 chr6:2503132-2503143
47	CEBPB	chr6:2497535-2497650	IMR90	lung:	n/a	n/a
48	CEBPB	chr6:2505490-2505782	HepG2	liver:	n/a	chr6:2505657-2505668
49	CEBPB	chr6:2427193-2427472	IMR90	lung:	n/a	n/a
50	CEBPB	chr6:2361512-2361676	HepG2	liver:	n/a	chr6:2361623-2361634 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361624-2361633 chr6:2361622-2361635 chr6:2361624-2361633

(count:1224 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:2382777-2382827	HRPEpiC	eye:	n/a
2	chr6:2413556-2413606	ProgFib	skin:	n/a
3	chr6:2352968-2353018	HRE	kidney:	n/a
4	chr6:2478543-2478593	MCF-7	breast:	n/a
5	chr6:2382777-2382827	HRPEpiC	eye:	n/a
6	chr6:2413556-2413606	ProgFib	skin:	n/a
7	chr6:2352968-2353018	HRE	kidney:	n/a
8	chr6:2478543-2478593	MCF-7	breast:	n/a
9	chr6:2375851-2375901	AG09319	gingival:	n/a
10	chr6:2467820-2467870	SK-N-MC	brain:	n/a
11	chr6:2377700-2377750	SK-N-SH_RA	brain:	n/a
12	chr6:2415343-2415393	AG04449	skin:	fetal
13	chr6:2478543-2478593	GM06990	blood:	n/a
14	chr6:2437142-2437192	Hela-S3	cervix:	n/a
15	chr6:2415850-2415900	SAEC	small airway:	n/a
16	chr6:2437147-2437197	HRE	kidney:	n/a
17	chr6:2449276-2449326	SKMC	muscle:	n/a
18	chr6:2382777-2382827	IMR90	lung:	fetal
19	chr6:2415343-2415393	HEK293	kidney:	embryo
20	chr6:2382777-2382827	HPAEpiC	pulmonary alveolar:	n/a
21	chr6:2467820-2467870	AG04450	lung:	fetal
22	chr6:2382734-2382784	AG10803	skin:	n/a
23	chr6:2415850-2415900	HIPEpiC	eye:	n/a
24	chr6:2382649-2382699	HRPEpiC	eye:	n/a
25	chr6:2352968-2353018	HCM	heart:	n/a
26	chr6:2478543-2478593	HL-60	blood:	n/a
27	chr6:2437142-2437192	RPTEC	kidney:	n/a
28	chr6:2377700-2377750	NHBE	bronchial:	n/a
29	chr6:2375895-2375945	HAEpiC	amniotic membrane:	n/a
30	chr6:2375851-2375901	BE2_C	brain:	n/a
31	chr6:2467820-2467870	AG04449	skin:	fetal
32	chr6:2382649-2382699	ECC-1	luminal epithelium:	n/a
33	chr6:2382734-2382784	AG04449	skin:	fetal
34	chr6:2467820-2467870	HCM	heart:	n/a
35	chr6:2437142-2437192	HCF	heart:	n/a
36	chr6:2377700-2377750	AG09319	gingival:	n/a
37	chr6:2382777-2382827	NT2-D1	testis:	n/a
38	chr6:2415767-2415817	A549	lung:	n/a
39	chr6:2375851-2375901	PFSK-1	brain:	n/a
40	chr6:2382734-2382784	GM06990	blood:	n/a
41	chr6:2375895-2375945	HIPEpiC	eye:	n/a
42	chr6:2375851-2375901	ovcar-3	ovarian:	n/a
43	chr6:2382734-2382784	A549	lung:	n/a
44	chr6:2413556-2413606	HCM	heart:	n/a
45	chr6:2478543-2478593	NT2-D1	testis:	n/a
46	chr6:2415850-2415900	AG04450	lung:	fetal
47	chr6:2297047-2297097	AG04449	skin:	fetal
48	chr6:2467820-2467870	Caco-2	colon:	n/a
49	chr6:2478543-2478593	Hela-S3	cervix:	n/a
50	chr6:2382734-2382784	NHDF-neo	bronchial:	n/a

(count:81 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:2477878..2480684-chr6:2482615..2484893,2	MCF-7	breast:
2	chr6:2438385..2440108-chr6:2441427..2443216,2	K562	blood:
3	chr6:2413985..2416473-chr6:2426217..2428226,2	K562	blood:
4	chr6:2351761..2353493-chr6:2362781..2364796,2	K562	blood:
5	chr6:2414672..2416357-chr6:2438734..2440972,2	K562	blood:
6	chr6:2429452..2431211-chr6:2436475..2439136,2	K562	blood:
7	chr6:2396597..2398652-chr6:2400293..2401857,2	K562	blood:
8	chr6:2373039..2375063-chr6:2375225..2378148,2	K562	blood:
9	chr6:1607913..1609589-chr6:2471423..2474239,2	MCF-7	breast:
10	chr6:2414672..2416357-chr6:2438734..2440972,2	K562	blood:
11	chr6:1596534..1597143-chr6:2353875..2354387,2	MCF-7	breast:
12	chr6:2477878..2480684-chr6:2482615..2484893,2	MCF-7	breast:
13	chr6:2209417..2210065-chr6:2353870..2354459,2	MCF-7	breast:
14	chr6:1894148..1894655-chr6:2354034..2354766,2	K562	blood:
15	chr6:1596675..1597218-chr6:2396217..2396777,2	K562	blood:
16	chr6:2459163..2462032-chr6:2462249..2463866,2	MCF-7	breast:
17	chr6:2362511..2364691-chr6:2394137..2395852,2	MCF-7	breast:
18	chr6:2244221..2245990-chr6:2413292..2415770,2	K562	blood:
19	chr6:1610116..1611823-chr6:2442447..2444389,2	MCF-7	breast:
20	chr6:2406407..2408708-chr6:2411447..2413753,2	K562	blood:
21	chr6:2491452..2493488-chr6:2494004..2496563,3	K562	blood:
22	chr6:2495907..2497453-chr6:2502286..2503853,2	K562	blood:
23	chr6:1596149..1597077-chr6:2353625..2354389,3	K562	blood:
24	chr6:2413985..2416473-chr6:2426217..2428226,2	K562	blood:
25	chr6:2429452..2431955-chr6:2435329..2437975,2	K562	blood:
26	chr6:2466043..2468777-chr6:2499549..2502300,2	MCF-7	breast:
27	chr6:1596198..1597096-chr6:2448736..2449270,3	K562	blood:
28	chr6:2406407..2408708-chr6:2411442..2413753,3	K562	blood:
29	chr6:2373039..2375063-chr6:2375225..2378148,2	K562	blood:
30	chr6:2368647..2371784-chr6:2373502..2376486,4	K562	blood:
31	chr6:2456765..2458829-chr6:2461564..2463147,2	MCF-7	breast:
32	chr6:2495907..2497453-chr6:2502286..2503853,2	K562	blood:
33	chr6:2460314..2461251-chr6:2634607..2635154,2	K562	blood:
34	chr6:2466043..2468777-chr6:2499549..2502300,2	MCF-7	breast:
35	chr6:2435125..2436735-chr6:2441414..2444146,2	MCF-7	breast:
36	chr6:2456765..2458829-chr6:2461564..2463147,2	MCF-7	breast:
37	chr6:2406407..2408708-chr6:2411447..2413753,2	K562	blood:
38	chr6:2353810..2354693-chr6:2448790..2449627,3	MCF-7	breast:
39	chr6:2438385..2440108-chr6:2441427..2443216,2	K562	blood:
40	chr6:2351761..2353493-chr6:2362781..2364796,2	K562	blood:
41	chr6:2469554..2470082-chr9:85201112..85201804,2	MCF-7	breast:
42	chr6:2465340..2466900-chr6:2469120..2471895,2	MCF-7	breast:
43	chr6:2494300..2496388-chr6:2496623..2498700,2	K562	blood:
44	chr6:2475196..2478313-chr6:2486828..2490420,3	MCF-7	breast:
45	chr3:64071017..64071832-chr6:2356280..2356941,2	MCF-7	breast:
46	chr6:2357336..2360924-chr6:2363674..2365844,4	K562	blood:
47	chr6:2484128..2486718-chr6:2506004..2507972,2	MCF-7	breast:
48	chr6:2448317..2449241-chr6:2484813..2485374,2	K562	blood:
49	chr6:2368647..2371784-chr6:2373502..2376486,4	K562	blood:
50	chr6:1604656..1605296-chr6:2353868..2354569,4	MCF-7	breast:

(count:125 , 50 per page) page: 1 2 3

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WRNIP1-2	chr6:2454198-2454255	XLOC_005127
2	lnc-C6orf195-18	chr6:2437884-2437916	NONHSAT106675
3	lnc-WRNIP1-2	chr6:2399197-2399254	ucscGeneNc_uc003mtu_1
4	lnc-WRNIP1-2	chr6:2398811-2399012	ENSG00000250903
5	lnc-WRNIP1-2	chr6:2283733-2283997	XLOC_005126
6	lnc-WRNIP1-2	chr6:2367178-2367549	ENSG00000250903
7	lnc-WRNIP1-35	chr6:2356966-2362624	NONHSAT106650
8	lnc-WRNIP1-37	chr6:2319163-2324833	NONHSAT106645
9	lnc-WRNIP1-37	chr6:2320666-2321867	NONHSAT106644
10	lnc-WRNIP1-34	chr6:2370339-2376003	NONHSAT106653
11	lnc-WRNIP1-2	chr6:2403917-2409577	NONHSAT106665
12	lnc-WRNIP1-36	chr6:2341684-2341950	NONHSAT106649
13	lnc-GMDS-7	chr6:2324973-2325332	NONHSAT106646
14	lnc-WRNIP1-37	chr6:2318135-2319249	NONHSAT106643
15	lnc-WRNIP1-2	chr6:2397455-2397754	NONHSAT106637
16	lnc-WRNIP1-2	chr6:2344099-2344270	ucscGeneNc_uc003mtu_1
17	lnc-WRNIP1-2	chr6:2399100-2399271	XLOC_005127
18	lnc-WRNIP1-2	chr6:2398806-2399012	XLOC_005127
19	lnc-C6orf195-12	chr6:2489875-2490173	NONHSAT106685
20	lnc-WRNIP1-32	chr6:2461380-2461501	NONHSAT106678
21	lnc-WRNIP1-33	chr6:2437783-2438483	ENSG00000272465.1
22	lnc-C6orf195-19	chr6:2435149-2435586	NONHSAT106669
23	lnc-C6orf195-15	chr6:2476464-2476762	NONHSAT106682
24	lnc-WRNIP1-2	chr6:2426067-2426402	ucscGeneNc_uc003mtu_1
25	lnc-WRNIP1-37	chr6:2324365-2324833	NONHSAT106644
26	lnc-WRNIP1-2	chr6:2329517-2329986	XLOC_005126
27	lnc-C6orf195-15	chr6:2476967-2476999	NONHSAT106682
28	lnc-WRNIP1-2	chr6:2481068-2481403	XLOC_005127
29	lnc-WRNIP1-35	chr6:2362156-2362624	NONHSAT106651
30	lnc-C6orf195-12	chr6:2490378-2490412	NONHSAT106685
31	lnc-WRNIP1-2	chr6:2481068-2481283	NONHSAT106664
32	lnc-C6orf195-12	chr6:2493786-2494044	NONHSAT106685
33	lnc-WRNIP1-2	chr6:2482221-2484261	XLOC_005127
34	lnc-WRNIP1-2	chr6:2283733-2284008	XLOC_005126
35	lnc-WRNIP1-2	chr6:2412721-2413782	ENSG00000250903
36	lnc-WRNIP1-2	chr6:2413014-2413825	NONHSAT106620
37	lnc-WRNIP1-2	chr6:2399100-2399271	ENSG00000250903
38	lnc-WRNIP1-2	chr6:2481068-2481352	ENSG00000250903.4
39	lnc-WRNIP1-2	chr6:2482221-2482256	ENSG00000250903.4
40	lnc-WRNIP1-2	chr6:2409109-2409577	NONHSAT106666
41	lnc-WRNIP1-2	chr6:2397580-2397860	NONHSAT106659
42	lnc-WRNIP1-2	chr6:2283733-2283892	XLOC_005126
43	lnc-WRNIP1-2	chr6:2481068-2481219	XLOC_005127
44	lnc-WRNIP1-2	chr6:2398811-2399012	NONHSAT106620
45	lnc-WRNIP1-2	chr6:2454198-2454255	XLOC_005127
46	lnc-WRNIP1-2	chr6:2398811-2399012	NONHSAT106659
47	lnc-WRNIP1-2	chr6:2398891-2399012	ENSG00000250903.4
48	lnc-WRNIP1-2	chr6:2283733-2283748	XLOC_005126
49	lnc-WRNIP1-2	chr6:2399216-2399271	XLOC_005127
50	lnc-C6orf195-15	chr6:2480370-2480630	NONHSAT106682

No data

Variant related genes	Relation type
ENSG00000266252	TF binding region
GMDS-AS1	TF binding region
HMGN2P28	TF binding region
ENSG00000272465	TF binding region
ENSG00000266252	CpG island
GMDS-AS1	CpG island
HMGN2P28	CpG island
ENSG00000272465	CpG island
ENSG00000272465	chromatin interactions
ENSG00000054598	chromatin interactions
ENSG00000250903	chromatin interactions
ENSG00000164385	chromatin interactions
ENSG00000112699	chromatin interactions
SMARCE1	miRNA target sites
ATXN7L3	miRNA target sites
PDE4D	miRNA target sites
BTBD3	miRNA target sites
KCTD10	miRNA target sites
KIF5A	miRNA target sites
CLEC4D	miRNA target sites
UBR5	miRNA target sites
PLAGL2	miRNA target sites
LUC7L2	miRNA target sites
SPG20	miRNA target sites
TMEM194A	miRNA target sites
TMED10	miRNA target sites
LRRC2	miRNA target sites
TAF4	miRNA target sites
SMAD4	miRNA target sites
CDK2	miRNA target sites

Extended variants
information (count: 8882 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:8882 , 50 per page) page: 1 2 3 4 5 6 7 ... 178

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12664420	chr6:2282747-2282748	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs544873531	chr6:2282773-2282774	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs565127864	chr6:2282779-2282780	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs555815827	chr6:2282794-2282795	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs368655273	chr6:2282805-2282806	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs554222110	chr6:2282810-2282811	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs139388846	chr6:2282904-2282905	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs544129564	chr6:2282949-2282950	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs534289788	chr6:2282950-2282951	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs529207633	chr6:2283029-2283030	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs548968597	chr6:2283033-2283034	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs559589319	chr6:2283051-2283052	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs528623030	chr6:2283090-2283091	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs551664569	chr6:2283145-2283146	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs149984197	chr6:2283158-2283159	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs537271311	chr6:2283187-2283188	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs551263319	chr6:2283259-2283260	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs12523924	chr6:2283266-2283267	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs555387608	chr6:2283279-2283280	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs536209852	chr6:2283284-2283285	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs553050790	chr6:2283290-2283291	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs140018283	chr6:2283305-2283306	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs80346526	chr6:2283322-2283323	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs34805593	chr6:2283323-2283324	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs7740851	chr6:2283343-2283344	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs70992128	chr6:2283347-2283348	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs538761198	chr6:2283350-2283351	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs563204961	chr6:2283387-2283388	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs576872792	chr6:2283397-2283398	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs558452667	chr6:2283404-2283405	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs573618120	chr6:2283409-2283410	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs575360849	chr6:2283410-2283411	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs544010094	chr6:2283418-2283419	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs372223098	chr6:2283466-2283467	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs552762486	chr6:2283500-2283501	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs188004520	chr6:2283558-2283559	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs574439465	chr6:2283564-2283565	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs542600504	chr6:2283597-2283598	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs554178967	chr6:2283600-2283601	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs143729718	chr6:2283639-2283640	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs528554277	chr6:2283640-2283641	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs545454954	chr6:2283653-2283654	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs565251548	chr6:2283659-2283660	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs35088972	chr6:2283685-2283686	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs191360837	chr6:2283758-2283759	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
46	rs531089171	chr6:2283765-2283766	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
47	rs551201862	chr6:2283796-2283797	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
48	rs117115419	chr6:2283801-2283802	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
49	rs368473140	chr6:2283811-2283812	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
50	rs530458314	chr6:2283824-2283825	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Prader-willi syndrome	20588305	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Uveal melanoma	20484589	CNVD
Melanoma	18172304	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1834 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:2247800-2284200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr6:2255800-2288600	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr6:2264400-2285800	Weak transcription	Brain Cingulate Gyrus	brain
4	chr6:2264600-2286400	Weak transcription	HSMM	muscle
5	chr6:2271400-2287600	Weak transcription	Right Ventricle	heart
6	chr6:2273000-2288200	Weak transcription	Aorta	Aorta
7	chr6:2273600-2284400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr6:2273600-2286000	Weak transcription	Fetal Thymus	thymus
9	chr6:2273600-2286600	Weak transcription	Fetal Muscle Trunk	muscle
10	chr6:2273600-2286600	Weak transcription	Pancreas	Pancrea
11	chr6:2273600-2286800	Weak transcription	Colonic Mucosa	Colon
12	chr6:2273600-2288200	Weak transcription	Spleen	Spleen
13	chr6:2273800-2284000	Weak transcription	Thymus	Thymus
14	chr6:2273800-2288800	Weak transcription	Brain Anterior Caudate	brain
15	chr6:2274000-2283800	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr6:2274200-2286200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
17	chr6:2274400-2283200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr6:2274400-2283800	Weak transcription	Ovary	ovary
19	chr6:2274400-2284800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr6:2274600-2284200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr6:2274600-2290000	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr6:2275200-2283800	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr6:2275400-2283600	Weak transcription	Duodenum Mucosa	Duodenum
24	chr6:2275400-2319400	Weak transcription	Gastric	stomach
25	chr6:2275600-2283800	Weak transcription	Left Ventricle	heart
26	chr6:2275800-2283800	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr6:2275800-2288200	Weak transcription	Stomach Smooth Muscle	stomach
28	chr6:2276200-2283200	Weak transcription	Fetal Stomach	stomach
29	chr6:2276400-2283800	Weak transcription	HSMMtube	muscle
30	chr6:2276400-2284800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr6:2276400-2286600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr6:2276400-2287800	Weak transcription	Stomach Mucosa	stomach
33	chr6:2276800-2285400	Weak transcription	NHDF-Ad	bronchial
34	chr6:2278200-2287000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr6:2279000-2282800	Weak transcription	Primary monocytes fromperipheralblood	blood
36	chr6:2279400-2283800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr6:2280600-2282800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
38	chr6:2280600-2283600	Weak transcription	Adipose Nuclei	Adipose
39	chr6:2281000-2283400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr6:2281200-2283600	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr6:2281200-2289200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr6:2281400-2283800	Weak transcription	HepG2	liver
43	chr6:2281800-2283600	Weak transcription	Primary B cells from peripheral blood	blood
44	chr6:2281800-2283800	Weak transcription	Liver	Liver
45	chr6:2282000-2283400	Weak transcription	Fetal Lung	lung
46	chr6:2282200-2284000	Weak transcription	Placenta	Placenta
47	chr6:2282600-2282800	ZNF genes & repeats	Primary B cells from cord blood	blood
48	chr6:2282600-2282800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
49	chr6:2282600-2287400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr6:2282800-2283200	Weak transcription	Primary T cells fromperipheralblood	blood

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