Variant report

Variant	nsv887440
Chromosome Location	chr7:6743097-6820508
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1599)
CpG islands
(count:2077)
Chromatin interactive
region (count:37)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1599 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:6746508-6747088	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:6747987-6748210	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:6746582-6746922	K562	blood:	n/a	n/a
4	ARID3A	chr7:6749446-6749789	HepG2	liver:	n/a	n/a
5	ARID3A	chr7:6769330-6769549	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:6769148-6769268	K562	blood:	n/a	n/a
7	ATF2	chr7:6764660-6765106	GM12878	blood:	n/a	n/a
8	ATF2	chr7:6765435-6765872	GM12878	blood:	n/a	n/a
9	ATF2	chr7:6769041-6769427	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr7:6764577-6765116	GM12878	blood:	n/a	n/a
11	ATF2	chr7:6768932-6769576	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr7:6746344-6746860	A549	lung:	n/a	chr7:6746443-6746452
13	ATF3	chr7:6746455-6746774	K562	blood:	n/a	n/a
14	ATF3	chr7:6746338-6746843	A549	lung:	n/a	chr7:6746443-6746452
15	BATF	chr7:6764386-6765017	GM12878	blood:	n/a	n/a
16	BATF	chr7:6770212-6770532	GM12878	blood:	n/a	n/a
17	BATF	chr7:6745480-6745720	GM12878	blood:	n/a	n/a
18	BCL11A	chr7:6764490-6765004	GM12878	blood:	n/a	n/a
19	BCL3	chr7:6764602-6765093	GM12878	blood:	n/a	n/a
20	BCL3	chr7:6765434-6765865	GM12878	blood:	n/a	n/a
21	BCLAF1	chr7:6769053-6769626	GM12878	blood:	n/a	n/a
22	BCLAF1	chr7:6746183-6746931	GM12878	blood:	n/a	chr7:6746574-6746587 chr7:6746324-6746333 chr7:6746577-6746590 chr7:6746318-6746331 chr7:6746657-6746670
23	BCLAF1	chr7:6768933-6769605	GM12878	blood:	n/a	chr7:6768960-6768969
24	BCLAF1	chr7:6765486-6765849	GM12878	blood:	n/a	n/a
25	BCLAF1	chr7:6764543-6765036	GM12878	blood:	n/a	n/a
26	BHLHE40	chr7:6769947-6770143	K562	blood:	n/a	n/a
27	BHLHE40	chr7:6765444-6765862	GM12878	blood:	n/a	n/a
28	BHLHE40	chr7:6745621-6745991	K562	blood:	n/a	n/a
29	BHLHE40	chr7:6746430-6746875	HepG2	liver:	n/a	n/a
30	BHLHE40	chr7:6746435-6747008	K562	blood:	n/a	n/a
31	BHLHE40	chr7:6764639-6765044	GM12878	blood:	n/a	n/a
32	BHLHE40	chr7:6769137-6769602	GM12878	blood:	n/a	n/a
33	BHLHE40	chr7:6769211-6769538	K562	blood:	n/a	n/a
34	BRCA1	chr7:6746338-6747069	GM12878	blood:	n/a	n/a
35	BRCA1	chr7:6746299-6746907	HepG2	liver:	n/a	n/a
36	BRCA1	chr7:6769210-6769550	Hela-S3	cervix:	n/a	n/a
37	BRCA1	chr7:6745893-6746041	HepG2	liver:	n/a	n/a
38	BRCA1	chr7:6746551-6747053	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr7:6746365-6746883	H1-hESC	embryonic stem cell:	n/a	n/a
40	BRCA1	chr7:6769345-6769648	HepG2	liver:	n/a	n/a
41	CBX3	chr7:6768879-6769361	K562	blood:	n/a	n/a
42	CBX3	chr7:6746385-6747206	K562	blood:	n/a	n/a
43	CBX3	chr7:6768880-6769635	K562	blood:	n/a	n/a
44	CBX3	chr7:6749454-6749792	K562	blood:	n/a	n/a
45	CBX3	chr7:6745362-6746144	K562	blood:	n/a	n/a
46	CBX3	chr7:6803410-6803703	K562	blood:	n/a	n/a
47	CBX3	chr7:6749453-6749879	K562	blood:	n/a	n/a
48	CBX3	chr7:6746593-6747092	K562	blood:	n/a	n/a
49	CBX3	chr7:6769851-6770383	K562	blood:	n/a	n/a
50	CBX3	chr7:6749398-6749899	HCT-116	colon:	n/a	n/a

(count:2077 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:6770940-6770990	MCF10A-Er-Src	breast:	n/a
2	chr7:6770013-6770063	HNPCEpiC	eye:	n/a
3	chr7:6790012-6790062	MCF10A-Er-Src	breast:	n/a
4	chr7:6770940-6770990	MCF10A-Er-Src	breast:	n/a
5	chr7:6770013-6770063	HNPCEpiC	eye:	n/a
6	chr7:6790012-6790062	MCF10A-Er-Src	breast:	n/a
7	chr7:6772985-6773035	GM12891	blood:	n/a
8	chr7:6774169-6774219	K562	blood:	n/a
9	chr7:6793823-6793873	HL-60	blood:	n/a
10	chr7:6766092-6766142	NB4	blood:	n/a
11	chr7:6746977-6747027	HEEpiC	esophagus:	n/a
12	chr7:6746558-6746608	GM12878	blood:	n/a
13	chr7:6770940-6770990	GM06990	blood:	n/a
14	chr7:6774169-6774219	AG09309	skin:	n/a
15	chr7:6817550-6817600	MCF-7	breast:	n/a
16	chr7:6746605-6746655	HRCEpiC	kidney:	n/a
17	chr7:6800488-6800538	GM06990	blood:	n/a
18	chr7:6769409-6769459	HAEpiC	amniotic membrane:	n/a
19	chr7:6793977-6794027	AG04449	skin:	fetal
20	chr7:6746605-6746655	NT2-D1	testis:	n/a
21	chr7:6770013-6770063	HepG2	liver:	n/a
22	chr7:6746558-6746608	MCF-7	breast:	n/a
23	chr7:6749638-6749688	GM12878	blood:	n/a
24	chr7:6743091-6743141	BE2_C	brain:	n/a
25	chr7:6773787-6773837	HMEC	breast:	n/a
26	chr7:6770940-6770990	RPTEC	kidney:	n/a
27	chr7:6793977-6794027	HPAEpiC	pulmonary alveolar:	n/a
28	chr7:6819532-6819582	HCT-116	colon:	n/a
29	chr7:6770013-6770063	HIPEpiC	eye:	n/a
30	chr7:6803522-6803572	SK-N-SH_RA	brain:	n/a
31	chr7:6772985-6773035	AG09309	skin:	n/a
32	chr7:6797497-6797547	HEK293	kidney:	embryo
33	chr7:6749638-6749688	SAEC	small airway:	n/a
34	chr7:6746558-6746608	HCPEpiC	choroid plexus:	n/a
35	chr7:6797497-6797547	SK-N-SH	brain:	n/a
36	chr7:6803522-6803572	HIPEpiC	eye:	n/a
37	chr7:6819532-6819582	BJ	skin:	n/a
38	chr7:6770940-6770990	ECC-1	luminal epithelium:	n/a
39	chr7:6790012-6790062	GM19239	blood:	n/a
40	chr7:6774169-6774219	CMK	blood:	n/a
41	chr7:6800488-6800538	RPTEC	kidney:	n/a
42	chr7:6770940-6770990	T-47D	breast:	n/a
43	chr7:6769409-6769459	IMR90	lung:	fetal
44	chr7:6749638-6749688	ProgFib	skin:	n/a
45	chr7:6746837-6746887	HepG2	liver:	n/a
46	chr7:6790012-6790062	T-47D	breast:	n/a
47	chr7:6750462-6750512	HCF	heart:	n/a
48	chr7:6817550-6817600	BE2_C	brain:	n/a
49	chr7:6793977-6794027	BE2_C	brain:	n/a
50	chr7:6749638-6749688	Hela-S3	cervix:	n/a

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:6745463..6748475-chr7:6767656..6769994,3	K562	blood:
2	chr7:6745105..6747702-chr7:6760857..6762901,2	MCF-7	breast:
3	chr7:6675529..6677980-chr7:6768487..6770695,2	K562	blood:
4	chr7:6616941..6618678-chr7:6767339..6769412,2	MCF-7	breast:
5	chr7:6628194..6631157-chr7:6744707..6746398,2	MCF-7	breast:
6	chr2:85554880..85555877-chr7:6769205..6770035,2	Hela-S3	cervix:
7	chr7:6700299..6703221-chr7:6744305..6746051,2	MCF-7	breast:
8	chr7:6733958..6736454-chr7:6743190..6744750,2	MCF-7	breast:
9	chr7:6761698..6764136-chr7:6769053..6770920,2	MCF-7	breast:
10	chr7:6723810..6726047-chr7:6741639..6744334,2	K562	blood:
11	chr7:6755281..6757989-chr7:6768169..6769805,2	K562	blood:
12	chr12:7052777..7053414-chr7:6746050..6746651,2	Hela-S3	cervix:
13	chr7:6745040..6747820-chr7:6753016..6755979,2	K562	blood:
14	chr7:6746161..6747688-chr7:6768318..6771249,2	MCF-7	breast:
15	chr7:6745224..6747442-chr7:6767898..6770902,3	MCF-7	breast:
16	chr7:6745463..6748475-chr7:6767656..6769994,3	K562	blood:
17	chr17:59484738..59486572-chr7:6745021..6746847,2	MCF-7	breast:
18	chr7:6743479..6745149-chr7:6745557..6748493,2	MCF-7	breast:
19	chr7:6745224..6747442-chr7:6767898..6770902,3	MCF-7	breast:
20	chr7:6738166..6741088-chr7:6742524..6744616,4	MCF-7	breast:
21	chr7:6727828..6730097-chr7:6741325..6744372,3	MCF-7	breast:
22	chr7:6741635..6743185-chr7:6744892..6746414,2	MCF-7	breast:
23	chr7:6736883..6740896-chr7:6741673..6744991,4	MCF-7	breast:
24	chr7:6048395..6048947-chr7:6768981..6769924,2	NB4	blood:
25	chr7:6676193..6679067-chr7:6744810..6746794,4	K562	blood:
26	chr7:6744871..6747873-chr7:6767656..6771321,4	K562	blood:
27	chr7:6767588..6769922-chr7:6774691..6777140,2	MCF-7	breast:
28	chr7:6766860..6769459-chr7:6864426..6866111,2	MCF-7	breast:
29	chr7:6729955..6731866-chr7:6746781..6748682,2	MCF-7	breast:
30	chr7:6681243..6682856-chr7:6746246..6748831,2	K562	blood:
31	chr2:179315296..179317868-chr7:6745682..6748008,2	MCF-7	breast:
32	chr7:6744871..6747873-chr7:6767656..6771321,4	K562	blood:
33	chr7:6768428..6771621-chr7:6773707..6775724,3	MCF-7	breast:
34	chr7:6768428..6771621-chr7:6773707..6775724,3	MCF-7	breast:
35	chr7:6767588..6769922-chr7:6774691..6777140,2	MCF-7	breast:
36	chr7:6675962..6678642-chr7:6744432..6748032,4	MCF-7	breast:
37	chr7:6746161..6747688-chr7:6768318..6771249,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RSPH10B2-1	chr7:6771528-6771586	NONHSAT119063
2	lnc-AC073343.1-1	chr7:6746704-6748672	NONHSAT119061
3	lnc-AC073343.1-1	chr7:6748310-6748670	NONHSAT119062
4	lnc-RSPH10B2-1	chr7:6749757-6749869	NONHSAT119063
5	lnc-AC073343.1-1	chr7:6751010-6751093	NONHSAT119062
6	lnc-AC073343.1-1	chr7:6751010-6751133	NONHSAT119061
7	lnc-AC073343.1-1	chr7:6748199-6748532	ENSG00000228010.1
8	lnc-AC073343.1-1	chr7:6747932-6748026	ENSG00000228010.1
9	lnc-RSPH10B2-1	chr7:6792653-6793492	NONHSAT119063
10	lnc-AC073343.1-1	chr7:6750381-6750402	NONHSAT119061

No data

Variant related genes	Relation type
RSPH10B2	TF binding region
ZNF12	TF binding region
PMS2CL	TF binding region
RSPH10B2	CpG island
ZNF12	CpG island
PMS2CL	CpG island
ENSG00000180228	chromatin interactions
ENSG00000146576	chromatin interactions
ENSG00000136247	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000204311	chromatin interactions
ENSG00000187953	chromatin interactions
ENSG00000152291	chromatin interactions
ENSG00000205903	chromatin interactions
ENSG00000122512	chromatin interactions
ENSG00000265245	chromatin interactions
ENSG00000106305	chromatin interactions
ENSG00000121068	chromatin interactions
ENSG00000232581	chromatin interactions
ENSG00000164631	chromatin interactions
ENSG00000146574	chromatin interactions

Extended variants
information (count: 2296 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:2296 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17789894	chr7:6743097-6743098	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs557916092	chr7:6743099-6743100	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs188105868	chr7:6743107-6743108	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs555464263	chr7:6743112-6743113	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs148614996	chr7:6743115-6743116	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs373094306	chr7:6743137-6743138	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs576342659	chr7:6743141-6743142	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs572238646	chr7:6743176-6743177	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs142036606	chr7:6743179-6743180	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs151142504	chr7:6743203-6743204	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs374818157	chr7:6743238-6743239	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs531291411	chr7:6743246-6743247	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs543545047	chr7:6743258-6743259	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs561344993	chr7:6743264-6743265	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs75165920	chr7:6743332-6743333	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs558003764	chr7:6743370-6743371	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs141273019	chr7:6743389-6743390	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs146953556	chr7:6743413-6743414	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs533706425	chr7:6743475-6743476	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs117408417	chr7:6743526-6743527	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs78389532	chr7:6743532-6743533	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs141714277	chr7:6743553-6743554	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs181010095	chr7:6743557-6743558	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs540986471	chr7:6743569-6743570	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs567627011	chr7:6743588-6743589	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs370152114	chr7:6743595-6743596	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs554082849	chr7:6743610-6743611	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs572350638	chr7:6743630-6743631	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs542240076	chr7:6743708-6743709	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs138301372	chr7:6743731-6743732	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs557659888	chr7:6743736-6743737	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs373502118	chr7:6743747-6743748	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs200151874	chr7:6743780-6743781	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs566265013	chr7:6743796-6743797	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs186264528	chr7:6743862-6743863	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs149216815	chr7:6743899-6743900	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs573289698	chr7:6743922-6743923	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs540601525	chr7:6743943-6743944	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs189981586	chr7:6744004-6744005	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs533446640	chr7:6744013-6744014	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs372827302	chr7:6744074-6744075	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs552096456	chr7:6744085-6744086	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs181518374	chr7:6744086-6744087	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs531148013	chr7:6744165-6744166	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs549467939	chr7:6744185-6744186	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs71010911	chr7:6744201-6744202	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs554947437	chr7:6744306-6744307	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs187049912	chr7:6744324-6744325	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs143257805	chr7:6744328-6744329	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs535152112	chr7:6744343-6744344	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bladder cancer	21909424	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21045282	CNVD
Disorders of sex development	21048976	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	21525872	CNVD
Autism	20685689	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:1755 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:6712400-6744000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:6721400-6745200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
3	chr7:6721600-6743800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
4	chr7:6721600-6744600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:6721600-6745400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr7:6721800-6744000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr7:6722400-6745000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
8	chr7:6722600-6745000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr7:6723600-6745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr7:6723600-6745400	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr7:6723800-6745000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:6724000-6744800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr7:6725000-6744800	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr7:6725800-6745000	ZNF genes & repeats	NH-A	brain
15	chr7:6726000-6743600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
16	chr7:6726000-6744800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
17	chr7:6726000-6745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr7:6726000-6745000	ZNF genes & repeats	Fetal Muscle Leg	muscle
19	chr7:6726000-6745200	ZNF genes & repeats	A549	lung
20	chr7:6726200-6743600	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr7:6726200-6743600	ZNF genes & repeats	NHEK	skin
22	chr7:6726200-6743800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr7:6726200-6743800	ZNF genes & repeats	HMEC	breast
24	chr7:6726200-6745000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
25	chr7:6726200-6745000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
26	chr7:6726200-6745000	ZNF genes & repeats	Fetal Lung	lung
27	chr7:6726400-6743600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
28	chr7:6726400-6744800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
29	chr7:6726600-6745000	ZNF genes & repeats	GM12878-XiMat	blood
30	chr7:6730400-6744000	ZNF genes & repeats	Colonic Mucosa	Colon
31	chr7:6730800-6745000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr7:6731200-6745400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr7:6732600-6744000	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
34	chr7:6733200-6745200	ZNF genes & repeats	Fetal Intestine Small	intestine
35	chr7:6733600-6744800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr7:6736200-6743600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr7:6737000-6744000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr7:6738000-6744800	Strong transcription	Fetal Thymus	thymus
39	chr7:6738800-6743600	ZNF genes & repeats	Hela-S3	cervix
40	chr7:6738800-6744800	ZNF genes & repeats	Fetal Stomach	stomach
41	chr7:6739400-6745600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr7:6739600-6745400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr7:6739800-6743200	Strong transcription	HUVEC	blood vessel
44	chr7:6740200-6743600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr7:6740200-6743800	ZNF genes & repeats	Primary B cells from cord blood	blood
46	chr7:6740200-6743800	ZNF genes & repeats	Lung	lung
47	chr7:6740200-6745200	ZNF genes & repeats	K562	blood
48	chr7:6740400-6743600	ZNF genes & repeats	NHLF	lung
49	chr7:6740400-6743800	ZNF genes & repeats	Aorta	Aorta
50	chr7:6740400-6743800	ZNF genes & repeats	NHDF-Ad	bronchial

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