Variant report

Variant	nsv888548
Chromosome Location	chr7:80553950-80587737
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:485)
CpG islands
(count:0)
Chromatin interactive
region (count:63)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:485 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:80571804-80571997	HepG2	liver:	n/a	n/a
2	ATF3	chr7:80571390-80572740	A549	lung:	n/a	n/a
3	ATF3	chr7:80571408-80572750	A549	lung:	n/a	n/a
4	BACH1	chr7:80571546-80571818	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCL3	chr7:80570604-80572578	A549	lung:	n/a	chr7:80572210-80572219 chr7:80571560-80571569
6	BCL3	chr7:80571380-80572426	A549	lung:	n/a	chr7:80572210-80572219 chr7:80571560-80571569
7	BRCA1	chr7:80571409-80571952	Hela-S3	cervix:	n/a	n/a
8	CBX3	chr7:80571427-80572172	HCT-116	colon:	n/a	n/a
9	CBX3	chr7:80571431-80572090	HCT-116	colon:	n/a	n/a
10	CEBPB	chr7:80570506-80571196	A549	lung:	n/a	chr7:80570909-80570920 chr7:80570561-80570573 chr7:80570911-80570922
11	CEBPB	chr7:80570585-80571178	MCF-7	breast:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
12	CEBPB	chr7:80570662-80571141	A549	lung:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
13	CEBPB	chr7:80570697-80571132	IMR90	lung:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
14	CEBPB	chr7:80571423-80572276	HCT-116	colon:	n/a	n/a
15	CEBPB	chr7:80570629-80571301	HCT-116	colon:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
16	CEBPB	chr7:80571567-80572126	ECC-1	luminal epithelium:	n/a	n/a
17	CEBPB	chr7:80571426-80572351	MCF-7	breast:	n/a	n/a
18	CEBPB	chr7:80572548-80573066	MCF-7	breast:	n/a	n/a
19	CEBPB	chr7:80572570-80573123	MCF-7	breast:	n/a	n/a
20	CEBPB	chr7:80571462-80572054	Hela-S3	cervix:	n/a	n/a
21	CEBPB	chr7:80571566-80572168	ECC-1	luminal epithelium:	n/a	n/a
22	CEBPB	chr7:80570870-80570954	H1-hESC	embryonic stem cell:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
23	CEBPB	chr7:80571484-80572159	IMR90	lung:	n/a	n/a
24	CEBPB	chr7:80571442-80572432	A549	lung:	n/a	n/a
25	CEBPB	chr7:80570841-80570956	K562	blood:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
26	CEBPB	chr7:80571283-80572557	A549	lung:	n/a	n/a
27	CEBPB	chr7:80570467-80572448	MCF-7	breast:	n/a	chr7:80570909-80570920 chr7:80570561-80570573 chr7:80570911-80570922
28	CEBPB	chr7:80570698-80571155	Hela-S3	cervix:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
29	CEBPB	chr7:80570715-80571199	ECC-1	luminal epithelium:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
30	CEBPB	chr7:80570741-80571080	HepG2	liver:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
31	CEBPB	chr7:80571435-80572289	A549	lung:	n/a	n/a
32	CEBPB	chr7:80563825-80563828	IMR90	lung:	n/a	n/a
33	CEBPB	chr7:80571376-80572231	HCT-116	colon:	n/a	n/a
34	CEBPB	chr7:80570686-80571140	ECC-1	luminal epithelium:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
35	CEBPB	chr7:80570708-80571165	HCT-116	colon:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
36	CEBPB	chr7:80570716-80571112	A549	lung:	n/a	chr7:80570909-80570920 chr7:80570911-80570922
37	CHD2	chr7:80571531-80571968	Hela-S3	cervix:	n/a	n/a
38	CHD2	chr7:80570580-80570974	Hela-S3	cervix:	n/a	n/a
39	CREB1	chr7:80571476-80571829	A549	lung:	n/a	n/a
40	CREB1	chr7:80571520-80572095	A549	lung:	n/a	n/a
41	CTCF	chr7:80554865-80554932	GM13976	blood:	n/a	n/a
42	CTCF	chr7:80572393-80572457	Fibrobl	skin:	n/a	n/a
43	CTCF	chr7:80559688-80559728	Kidney_OC	kidney:	n/a	n/a
44	CTCF	chr7:80571660-80571810	MCF-7	breast:	n/a	n/a
45	CTCF	chr7:80555371-80555426	GM13976	blood:	n/a	n/a
46	E2F4	chr7:80563672-80563952	MCF10A-Er-Src	breast:	n/a	n/a
47	E2F4	chr7:80570002-80570285	MCF10A-Er-Src	breast:	n/a	n/a
48	E2F4	chr7:80570785-80571217	MCF10A-Er-Src	breast:	n/a	n/a
49	E2F4	chr7:80571589-80572407	MCF10A-Er-Src	breast:	n/a	n/a
50	E2F6	chr7:80571403-80572451	A549	lung:	n/a	n/a

No data

(count:63 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:109741154..109743613-chr7:80565480..80568446,2	MCF-7	breast:
2	chr7:80568560..80571275-chr7:81069609..81073018,3	MCF-7	breast:
3	chr7:80572589..80574817-chr7:80578538..80580273,2	K562	blood:
4	chr7:80550231..80550880-chr7:80571740..80572600,3	MCF-7	breast:
5	chr7:80572189..80572824-chr7:80704051..80704818,2	MCF-7	breast:
6	chr7:80570359..80572811-chr7:80898526..80900514,2	MCF-7	breast:
7	chr7:80578708..80580487-chr7:80581408..80583995,2	MCF-7	breast:
8	chr7:80569413..80574847-chr7:80699987..80704923,10	MCF-7	breast:
9	chr7:80569987..80572851-chr7:80884552..80889761,8	MCF-7	breast:
10	chr7:80572153..80572810-chr7:80797740..80798526,2	MCF-7	breast:
11	chr7:80570440..80573210-chr7:80694218..80696148,2	MCF-7	breast:
12	chr7:80572005..80572687-chr7:80788332..80788947,2	MCF-7	breast:
13	chr7:80568680..80571770-chr7:81074314..81077443,3	MCF-7	breast:
14	chr7:80578708..80580487-chr7:80581408..80583995,2	MCF-7	breast:
15	chr7:80576440..80578496-chr7:80734591..80737264,2	MCF-7	breast:
16	chr7:80572045..80572854-chr7:80788401..80789236,4	MCF-7	breast:
17	chr7:80505822..80506764-chr7:80571634..80572839,6	MCF-7	breast:
18	chr7:80570445..80573184-chr7:81084491..81088417,3	MCF-7	breast:
19	chr7:80568637..80573447-chr7:80883895..80888715,7	MCF-7	breast:
20	chr7:80583982..80586370-chr7:80587302..80589894,2	MCF-7	breast:
21	chr7:80562856..80565300-chr7:80567030..80569803,2	K562	blood:
22	chr7:80505822..80506764-chr7:80572030..80572839,5	MCF-7	breast:
23	chr7:80572589..80574817-chr7:80578538..80580273,2	K562	blood:
24	chr7:80583982..80586370-chr7:80587302..80589894,2	MCF-7	breast:
25	chr7:80571523..80573268-chr7:80727858..80730122,2	MCF-7	breast:
26	chr7:80570369..80572451-chr7:80702280..80705942,3	MCF-7	breast:
27	chr7:80569560..80571494-chr7:80881761..80883574,2	MCF-7	breast:
28	chr7:80505984..80506808-chr7:80572009..80573182,3	MCF-7	breast:
29	chr7:80569841..80573432-chr7:81092490..81095821,3	MCF-7	breast:
30	chr7:80570216..80571747-chr7:80803128..80806062,2	MCF-7	breast:
31	chr7:80572189..80572750-chr7:80697046..80697791,3	MCF-7	breast:
32	chr7:80570519..80573316-chr7:80792715..80798037,5	MCF-7	breast:
33	chr7:80562856..80565300-chr7:80567030..80569803,2	K562	blood:
34	chr7:80570278..80572086-chr7:80815972..80818560,2	MCF-7	breast:
35	chr7:80570676..80574921-chr7:80787209..80790875,5	MCF-7	breast:
36	chr7:80571993..80572689-chr7:80697291..80697866,3	MCF-7	breast:
37	chr7:80570770..80572897-chr7:105160779..105163688,2	MCF-7	breast:
38	chr7:80572230..80572810-chr7:80797271..80798240,3	MCF-7	breast:
39	chr7:80577580..80580215-chr7:80583349..80585940,2	K562	blood:
40	chr7:80571379..80572923-chr7:80681635..80683141,2	MCF-7	breast:
41	chr20:42706674..42707175-chr7:80572213..80572853,2	MCF-7	breast:
42	chr7:80571882..80572841-chr7:80694402..80695316,4	MCF-7	breast:
43	chr7:80550299..80550947-chr7:80572664..80573300,2	MCF-7	breast:
44	chr7:80572251..80575654-chr7:81073982..81077270,3	MCF-7	breast:
45	chr7:80570593..80572425-chr7:80891070..80893761,2	MCF-7	breast:
46	chr7:80571034..80573254-chr7:80627413..80629496,2	MCF-7	breast:
47	chr7:80553168..80555435-chr7:81083698..81087429,3	MCF-7	breast:
48	chr7:80570260..80572576-chr7:81081719..81084256,2	MCF-7	breast:
49	chr7:80513607..80515938-chr7:80569348..80571961,2	MCF-7	breast:
50	chr7:80570735..80573677-chr7:80637820..80640078,2	MCF-7	breast:

No data

Variant related genes	Relation type
SEMA3C	TF binding region
ENSG00000091127	chromatin interactions
ENSG00000232968	chromatin interactions
ENSG00000116299	chromatin interactions
ENSG00000237896	chromatin interactions

Extended variants
information (count: 1409 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:1409 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6964151	chr7:80553950-80553951	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs557559129	chr7:80554008-80554009	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs144577140	chr7:80554045-80554046	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs539179081	chr7:80554080-80554081	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs533622519	chr7:80554110-80554111	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs560355226	chr7:80554176-80554177	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs560222091	chr7:80554187-80554188	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs528859727	chr7:80554194-80554195	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs113176457	chr7:80554223-80554224	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs376241727	chr7:80554232-80554233	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs141458460	chr7:80554279-80554280	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs538052874	chr7:80554298-80554299	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs551113103	chr7:80554301-80554302	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs571107133	chr7:80554318-80554319	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs533874414	chr7:80554350-80554351	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs2190239	chr7:80554351-80554352	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs79419759	chr7:80554359-80554360	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs191344760	chr7:80554371-80554372	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs555847626	chr7:80554406-80554407	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs73376623	chr7:80554410-80554411	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs369320645	chr7:80554415-80554416	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs150363616	chr7:80554450-80554451	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs541403809	chr7:80554464-80554465	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs538252023	chr7:80554515-80554516	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs138039434	chr7:80554526-80554527	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs540953163	chr7:80554547-80554548	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs149520862	chr7:80554558-80554559	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs528895399	chr7:80554621-80554622	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs144034311	chr7:80554623-80554624	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs183634603	chr7:80554646-80554647	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs375932098	chr7:80554659-80554660	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs112441234	chr7:80554665-80554666	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs531351664	chr7:80554675-80554676	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs551051655	chr7:80554706-80554707	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs571143061	chr7:80554709-80554710	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs533717450	chr7:80554711-80554712	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs554307576	chr7:80554738-80554739	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs567415382	chr7:80554743-80554744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs73376625	chr7:80554748-80554749	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs555431204	chr7:80554791-80554792	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs536435878	chr7:80554847-80554848	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs578129314	chr7:80554877-80554878	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs375500626	chr7:80554884-80554885	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs572595360	chr7:80554906-80554907	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs73376627	chr7:80554916-80554917	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs116659843	chr7:80554917-80554918	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs35213508	chr7:80554927-80554928	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs377507231	chr7:80554932-80554933	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs10954412	chr7:80554999-80555000	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs189402576	chr7:80555040-80555041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Biliary cancer	19435499	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Neurodevelopmental disorder	22521361	CNVD
Metanephric adenoma	20802469	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Williams-beuren syndrome	16826523	CNVD
Olfactory neuroblastoma	18408657	CNVD
Wilms tumour	19318497	CNVD
Multiple myeloma	16616336	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Schizophrenia	17879154	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	20858243	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	21611746	CNVD

Chromatin state (count:251 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80548400-80570000	Weak transcription	Gastric	stomach
2	chr7:80549200-80565000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr7:80549400-80554400	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr7:80549600-80554000	Enhancers	Rectal Mucosa Donor 29	rectum
5	chr7:80551000-80556200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr7:80551200-80554400	Enhancers	A549	lung
7	chr7:80551800-80554600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr7:80551800-80555000	Enhancers	Primary hematopoietic stem cells	blood
9	chr7:80552200-80554600	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr7:80553400-80554000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr7:80553600-80554000	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr7:80553800-80554000	Enhancers	Colonic Mucosa	Colon
13	chr7:80553800-80554000	Enhancers	Colon Smooth Muscle	Colon
14	chr7:80553800-80554800	Weak transcription	Stomach Mucosa	stomach
15	chr7:80553800-80559000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr7:80554000-80555000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:80554800-80555000	Enhancers	Stomach Mucosa	stomach
18	chr7:80556200-80556800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr7:80556800-80558600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr7:80558600-80559600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr7:80558600-80559800	Enhancers	HMEC	breast
22	chr7:80558800-80559600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr7:80558800-80559600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr7:80558800-80559600	Enhancers	NHEK	skin
25	chr7:80559000-80559400	Enhancers	NHDF-Ad	bronchial
26	chr7:80559000-80559400	Enhancers	NHLF	lung
27	chr7:80559000-80559600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr7:80559000-80559600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr7:80559000-80559600	Enhancers	NH-A	brain
30	chr7:80559200-80559400	Enhancers	Osteobl	bone
31	chr7:80559400-80560600	Weak transcription	NHLF	lung
32	chr7:80559400-80561800	Weak transcription	Osteobl	bone
33	chr7:80559600-80561000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr7:80559600-80562000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr7:80559600-80562000	Weak transcription	NH-A	brain
36	chr7:80559600-80562000	Weak transcription	NHEK	skin
37	chr7:80559600-80563400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr7:80559600-80569400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr7:80559800-80562000	Weak transcription	HMEC	breast
40	chr7:80561800-80562400	Enhancers	Osteobl	bone
41	chr7:80562000-80562400	Enhancers	HMEC	breast
42	chr7:80562000-80562400	Enhancers	NH-A	brain
43	chr7:80562000-80562400	Enhancers	NHEK	skin
44	chr7:80562000-80563800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr7:80562400-80563400	Weak transcription	HMEC	breast
46	chr7:80562400-80563400	Weak transcription	Osteobl	bone
47	chr7:80562400-80569400	Weak transcription	NHEK	skin
48	chr7:80563000-80563600	Enhancers	Monocytes-CD14+_RO01746	blood
49	chr7:80563000-80564200	Enhancers	Primary hematopoietic stem cells short term culture	blood
50	chr7:80563200-80564200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links