Variant report

Variant	nsv888878
Chromosome Location	chr7:102212584-102334106
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4129)
CpG islands
(count:1041)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:4129 , 50 per page) page: 1 2 3 4 5 6 7 ... 83

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:102212897-102213097	HepG2	liver:	n/a	n/a
2	ATF3	chr7:102312099-102312242	K562	blood:	n/a	chr7:102312144-102312152
3	ATF3	chr7:102312022-102312401	A549	lung:	n/a	chr7:102312144-102312152
4	ATF3	chr7:102213014-102213188	K562	blood:	n/a	n/a
5	ATF3	chr7:102213014-102213141	GM12878	blood:	n/a	n/a
6	BACH1	chr7:102213021-102213172	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr7:102278880-102279149	GM12878	blood:	n/a	n/a
8	BATF	chr7:102251367-102251812	GM12878	blood:	n/a	n/a
9	BATF	chr7:102252871-102253062	GM12878	blood:	n/a	n/a
10	BATF	chr7:102266316-102266513	GM12878	blood:	n/a	n/a
11	BATF	chr7:102257362-102257620	GM12878	blood:	n/a	n/a
12	BATF	chr7:102312293-102312492	GM12878	blood:	n/a	n/a
13	BATF	chr7:102233914-102234227	GM12878	blood:	n/a	n/a
14	BATF	chr7:102313180-102313439	GM12878	blood:	n/a	n/a
15	BATF	chr7:102214085-102214343	GM12878	blood:	n/a	n/a
16	BATF	chr7:102234392-102234834	GM12878	blood:	n/a	n/a
17	BATF	chr7:102212379-102213628	GM12878	blood:	n/a	n/a
18	BATF	chr7:102329824-102330101	GM12878	blood:	n/a	n/a
19	BATF	chr7:102311459-102312701	GM12878	blood:	n/a	n/a
20	BATF	chr7:102291963-102292217	GM12878	blood:	n/a	n/a
21	BATF	chr7:102214079-102214404	GM12878	blood:	n/a	n/a
22	BATF	chr7:102284765-102285178	GM12878	blood:	n/a	n/a
23	BATF	chr7:102254118-102255225	GM12878	blood:	n/a	n/a
24	BATF	chr7:102293584-102293766	GM12878	blood:	n/a	n/a
25	BATF	chr7:102285771-102286300	GM12878	blood:	n/a	chr7:102286082-102286093
26	BATF	chr7:102305017-102305524	GM12878	blood:	n/a	n/a
27	BATF	chr7:102313151-102313476	GM12878	blood:	n/a	n/a
28	BATF	chr7:102285752-102286469	GM12878	blood:	n/a	chr7:102286082-102286093
29	BATF	chr7:102254763-102255038	GM12878	blood:	n/a	n/a
30	BATF	chr7:102286810-102287040	GM12878	blood:	n/a	n/a
31	BATF	chr7:102284603-102285287	GM12878	blood:	n/a	n/a
32	BATF	chr7:102247244-102247556	GM12878	blood:	n/a	n/a
33	BATF	chr7:102310540-102311004	GM12878	blood:	n/a	n/a
34	BATF	chr7:102212695-102213163	GM12878	blood:	n/a	n/a
35	BATF	chr7:102254253-102254722	GM12878	blood:	n/a	n/a
36	BATF	chr7:102278828-102279089	GM12878	blood:	n/a	n/a
37	BATF	chr7:102330287-102330744	GM12878	blood:	n/a	n/a
38	BATF	chr7:102306478-102306740	GM12878	blood:	n/a	n/a
39	BATF	chr7:102310144-102310402	GM12878	blood:	n/a	n/a
40	BATF	chr7:102256202-102256653	GM12878	blood:	n/a	n/a
41	BCL11A	chr7:102290983-102291245	GM12878	blood:	n/a	n/a
42	BCL11A	chr7:102251198-102251922	GM12878	blood:	n/a	chr7:102251388-102251397
43	BCL11A	chr7:102311440-102312266	GM12878	blood:	n/a	n/a
44	BCL11A	chr7:102278790-102279352	GM12878	blood:	n/a	n/a
45	BCL11A	chr7:102284553-102285170	GM12878	blood:	n/a	n/a
46	BCL11A	chr7:102313169-102313449	GM12878	blood:	n/a	n/a
47	BCL11A	chr7:102256150-102256705	GM12878	blood:	n/a	chr7:102256299-102256308
48	BCL11A	chr7:102305036-102305578	GM12878	blood:	n/a	chr7:102305424-102305433
49	BCL11A	chr7:102254803-102255012	GM12878	blood:	n/a	n/a
50	BCL11A	chr7:102214097-102214333	GM12878	blood:	n/a	n/a

(count:1041 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:102311965-102312015	AG09309	skin:	n/a
2	chr7:102308061-102308111	K562	blood:	n/a
3	chr7:102332458-102332508	PANC-1	pancreas:	n/a
4	chr7:102332458-102332508	GM19239	blood:	n/a
5	chr7:102311965-102312015	AG09309	skin:	n/a
6	chr7:102308061-102308111	K562	blood:	n/a
7	chr7:102332458-102332508	PANC-1	pancreas:	n/a
8	chr7:102332458-102332508	GM19239	blood:	n/a
9	chr7:102312308-102312358	HNPCEpiC	eye:	n/a
10	chr7:102327236-102327286	HNPCEpiC	eye:	n/a
11	chr7:102313389-102313439	Caco-2	colon:	n/a
12	chr7:102313412-102313462	MCF10A-Er-Src	breast:	n/a
13	chr7:102311965-102312015	ECC-1	luminal epithelium:	n/a
14	chr7:102312318-102312368	GM12892	blood:	n/a
15	chr7:102330635-102330685	H1-hESC	embryonic stem cell:	embryo
16	chr7:102312318-102312368	HRPEpiC	eye:	n/a
17	chr7:102246378-102246428	NHDF-neo	bronchial:	n/a
18	chr7:102279588-102279638	HepG2	liver:	n/a
19	chr7:102313389-102313439	NB4	blood:	n/a
20	chr7:102313412-102313462	HRCEpiC	kidney:	n/a
21	chr7:102312318-102312368	NH-A	brain:	n/a
22	chr7:102329146-102329196	HCPEpiC	choroid plexus:	n/a
23	chr7:102279588-102279638	CMK	blood:	n/a
24	chr7:102312331-102312381	HCF	heart:	n/a
25	chr7:102212892-102212942	T-47D	breast:	n/a
26	chr7:102329146-102329196	HNPCEpiC	eye:	n/a
27	chr7:102312200-102312250	HEK293	kidney:	embryo
28	chr7:102312315-102312365	RPTEC	kidney:	n/a
29	chr7:102312331-102312381	HNPCEpiC	eye:	n/a
30	chr7:102332458-102332508	HMEC	breast:	n/a
31	chr7:102312315-102312365	PrEC	prostate:	n/a
32	chr7:102312318-102312368	GM12891	blood:	n/a
33	chr7:102246378-102246428	HCPEpiC	choroid plexus:	n/a
34	chr7:102312318-102312368	HAEpiC	amniotic membrane:	n/a
35	chr7:102259241-102259291	Hepatocyte	liver:	n/a
36	chr7:102308061-102308111	IMR90	lung:	fetal
37	chr7:102332458-102332508	Jurkat	blood:	n/a
38	chr7:102332458-102332508	LNCaP	prostate:	n/a
39	chr7:102327236-102327286	BJ	skin:	n/a
40	chr7:102259241-102259291	NB4	blood:	n/a
41	chr7:102313412-102313462	MCF-7	breast:	n/a
42	chr7:102329146-102329196	HRE	kidney:	n/a
43	chr7:102311965-102312015	AG04450	lung:	fetal
44	chr7:102308061-102308111	MCF10A-Er-Src	breast:	n/a
45	chr7:102327236-102327286	HEEpiC	esophagus:	n/a
46	chr7:102312315-102312365	A549	lung:	n/a
47	chr7:102313389-102313439	MCF-7	breast:	n/a
48	chr7:102212892-102212942	NB4	blood:	n/a
49	chr7:102312331-102312381	IMR90	lung:	fetal
50	chr7:102312318-102312368	HEEpiC	esophagus:	n/a

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	RASA4	hsa-miR-335-5p	chr7:102227581-102227605

Variant related genes	Relation type
ENSG00000270249	TF binding region
ENSG00000228049	TF binding region
ENSG00000238997	TF binding region
UPK3BL	TF binding region
POLR2J2	TF binding region
ENSG00000205236	TF binding region
RASA4	TF binding region
RASA4DP	TF binding region
POLR2J3	TF binding region
SPDYE2B	TF binding region
ENSG00000270249	CpG island
ENSG00000228049	CpG island
ENSG00000238997	CpG island
UPK3BL	CpG island
POLR2J2	CpG island
ENSG00000205236	CpG island
RASA4	CpG island
RASA4DP	CpG island
POLR2J3	CpG island
SPDYE2B	CpG island

Extended variants
information (count: 1261 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:1261 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79283876	chr7:102212584-102212585	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs540840400	chr7:102212723-102212724	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs112662161	chr7:102212739-102212740	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs62483005	chr7:102212758-102212759	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs72494477	chr7:102212762-102212763	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs559090904	chr7:102212828-102212829	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs527781015	chr7:102212861-102212862	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs372720310	chr7:102212880-102212881	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs376484975	chr7:102212886-102212887	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs375946685	chr7:102212892-102212893	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs369201898	chr7:102212895-102212896	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs372726378	chr7:102212906-102212907	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs549025930	chr7:102212909-102212910	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs139049967	chr7:102212939-102212940	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs561216301	chr7:102212942-102212943	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
16	rs149627783	chr7:102212943-102212944	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs375779392	chr7:102212952-102212953	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs531777645	chr7:102212959-102212960	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs549884817	chr7:102212969-102212970	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs200065148	chr7:102213000-102213001	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs11487073	chr7:102213012-102213013	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs571925478	chr7:102213014-102213015	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs111789112	chr7:102213034-102213035	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs539312758	chr7:102213043-102213044	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs548014278	chr7:102213054-102213055	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs62483006	chr7:102213065-102213066	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs62483007	chr7:102213071-102213072	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs566236243	chr7:102213093-102213094	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs368154473	chr7:102213095-102213096	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs554699467	chr7:102213119-102213120	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs62483008	chr7:102213137-102213138	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs10248669	chr7:102213144-102213145	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs190650360	chr7:102213166-102213167	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs376708058	chr7:102213180-102213181	Bivalent/Poised TSS Active TSS Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs3094498	chr7:102213264-102213265	Bivalent/Poised TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs537082409	chr7:102213267-102213268	Bivalent/Poised TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs199886073	chr7:102213313-102213314	Bivalent/Poised TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs28624321	chr7:102213387-102213388	Bivalent/Poised TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs375393314	chr7:102213480-102213481	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs558230744	chr7:102213582-102213583	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs576747095	chr7:102213607-102213608	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs540877176	chr7:102213645-102213646	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs201737250	chr7:102213661-102213662	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs62483009	chr7:102213700-102213701	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs148470453	chr7:102213811-102213812	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs371278356	chr7:102213840-102213841	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs565307927	chr7:102213841-102213842	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs559131961	chr7:102213987-102213988	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs368045257	chr7:102214021-102214022	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs541655327	chr7:102214022-102214023	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Breast cancer	21858162	CNVD
Emphysema	19352772	CNVD
Effusion lymphoma	18079361	CNVD
Medulloblastoma	17653508	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Prostate cancer	18632612	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Cancer	19907438	CNVD
Breast cancer	21509527	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21364760	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
abnormal development	18461090	CNVD

Chromatin state (count:664 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102168600-102212600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr7:102173600-102212600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr7:102174800-102212600	Weak transcription	Fetal Stomach	stomach
4	chr7:102200600-102212600	Weak transcription	Fetal Brain Female	brain
5	chr7:102203000-102212600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr7:102203600-102212600	Weak transcription	Lung	lung
7	chr7:102203800-102212600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:102203800-102212600	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr7:102203800-102212600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr7:102204800-102212600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:102204800-102212600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr7:102204800-102212600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr7:102204800-102212600	Weak transcription	Spleen	Spleen
14	chr7:102205000-102212600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr7:102205000-102212600	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr7:102205000-102212600	Weak transcription	Brain Germinal Matrix	brain
17	chr7:102205000-102212600	Weak transcription	Left Ventricle	heart
18	chr7:102205600-102212600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr7:102205600-102212600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr7:102205600-102212600	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr7:102205600-102212600	Weak transcription	Placenta	Placenta
22	chr7:102206200-102212600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr7:102206200-102212600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr7:102206200-102212600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr7:102206200-102212600	Weak transcription	Adipose Nuclei	Adipose
26	chr7:102206200-102212600	Weak transcription	Brain Cingulate Gyrus	brain
27	chr7:102206200-102212600	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr7:102206200-102212600	Weak transcription	Fetal Thymus	thymus
29	chr7:102206200-102212600	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr7:102206200-102212600	Weak transcription	Thymus	Thymus
31	chr7:102206800-102212600	Weak transcription	Brain Angular Gyrus	brain
32	chr7:102206800-102212600	Weak transcription	Brain Hippocampus Middle	brain
33	chr7:102207200-102212600	Weak transcription	Primary B cells from cord blood	blood
34	chr7:102207400-102212600	Weak transcription	Primary neutrophils fromperipheralblood	blood
35	chr7:102209400-102212600	Weak transcription	NH-A	brain
36	chr7:102210000-102212600	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr7:102210000-102212600	Weak transcription	Colon Smooth Muscle	Colon
38	chr7:102210000-102212600	Weak transcription	Monocytes-CD14+_RO01746	blood
39	chr7:102210200-102212600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
40	chr7:102210200-102212600	Weak transcription	Fetal Muscle Leg	muscle
41	chr7:102211200-102212600	Weak transcription	Dnd41	blood
42	chr7:102211400-102212600	Weak transcription	Primary T helper cells PMA-I stimulated	--
43	chr7:102212400-102212600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
44	chr7:102212600-102212800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
45	chr7:102212600-102212800	Active TSS	Skeletal Muscle Female	skeletal muscle
46	chr7:102212600-102213000	Active TSS	ES-I3 Cell Line	embryonic stem cell
47	chr7:102212600-102213000	Active TSS	H1 Cell Line	embryonic stem cell
48	chr7:102212600-102213000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr7:102212600-102213000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr7:102212600-102213000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links