Variant report

Variant	nsv888929
Chromosome Location	chr7:105012975-105163091
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3101)
CpG islands
(count:2139)
Chromatin interactive
region (count:201)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:3101 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:105017364-105017690	K562	blood:	n/a	n/a
2	ARID3A	chr7:105128201-105128752	K562	blood:	n/a	n/a
3	ARID3A	chr7:105070221-105070610	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:105070152-105070549	K562	blood:	n/a	n/a
5	ARID3A	chr7:105042094-105042482	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:105028117-105028318	K562	blood:	n/a	n/a
7	ARID3A	chr7:105042035-105042531	K562	blood:	n/a	n/a
8	ARID3A	chr7:105141763-105141769	K562	blood:	n/a	n/a
9	ARID3A	chr7:105162675-105163137	K562	blood:	n/a	n/a
10	ARID3A	chr7:105039898-105040131	HepG2	liver:	n/a	n/a
11	ARID3A	chr7:105015076-105015149	K562	blood:	n/a	n/a
12	ARID3A	chr7:105162532-105162842	HepG2	liver:	n/a	n/a
13	ARID3A	chr7:105042910-105043317	K562	blood:	n/a	n/a
14	ARID3A	chr7:105080108-105080325	HepG2	liver:	n/a	n/a
15	ARID3A	chr7:105019839-105020013	K562	blood:	n/a	n/a
16	ARID3A	chr7:105039651-105040180	K562	blood:	n/a	n/a
17	ARID3A	chr7:105029792-105030248	HepG2	liver:	n/a	n/a
18	ATF1	chr7:105070205-105070516	K562	blood:	n/a	n/a
19	ATF1	chr7:105128345-105128752	K562	blood:	n/a	n/a
20	ATF2	chr7:105162441-105162701	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF3	chr7:105162419-105162922	K562	blood:	n/a	chr7:105162516-105162525
22	ATF3	chr7:105162479-105162756	A549	lung:	n/a	chr7:105162516-105162525
23	BACH1	chr7:105103081-105103084	K562	blood:	n/a	n/a
24	BACH1	chr7:105029716-105030051	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr7:105161884-105162223	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr7:105162629-105162935	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr7:105027844-105028042	K562	blood:	n/a	n/a
28	BACH1	chr7:105113653-105113991	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr7:105113662-105113870	K562	blood:	n/a	n/a
30	BACH1	chr7:105028171-105028753	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr7:105029014-105029308	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr7:105042903-105043365	K562	blood:	n/a	n/a
33	BATF	chr7:105041762-105041974	GM12878	blood:	n/a	n/a
34	BATF	chr7:105084864-105085128	GM12878	blood:	n/a	n/a
35	BCL3	chr7:105162453-105163079	A549	lung:	n/a	chr7:105162468-105162481 chr7:105162470-105162483
36	BCLAF1	chr7:105162157-105163019	K562	blood:	n/a	chr7:105162468-105162481 chr7:105162470-105162483
37	BHLHE40	chr7:105088647-105088769	GM12878	blood:	n/a	n/a
38	BHLHE40	chr7:105028352-105028581	GM12878	blood:	n/a	chr7:105028425-105028441
39	BHLHE40	chr7:105029661-105030115	K562	blood:	n/a	chr7:105029666-105029682
40	BHLHE40	chr7:105161610-105163105	K562	blood:	n/a	n/a
41	BHLHE40	chr7:105042095-105042394	K562	blood:	n/a	n/a
42	BHLHE40	chr7:105128299-105128701	K562	blood:	n/a	n/a
43	BHLHE40	chr7:105039812-105040017	K562	blood:	n/a	n/a
44	BHLHE40	chr7:105029678-105029984	GM12878	blood:	n/a	n/a
45	BHLHE40	chr7:105028285-105028701	K562	blood:	n/a	chr7:105028425-105028441
46	BHLHE40	chr7:105162517-105162823	A549	lung:	n/a	n/a
47	BHLHE40	chr7:105029124-105029187	K562	blood:	n/a	n/a
48	BHLHE40	chr7:105161582-105163259	GM12878	blood:	n/a	n/a
49	BHLHE40	chr7:105161948-105162953	HepG2	liver:	n/a	n/a
50	BHLHE40	chr7:105162519-105162872	HepG2	liver:	n/a	n/a

(count:2139 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:105029385-105029435	GM06990	blood:	n/a
2	chr7:105029492-105029542	SKMC	muscle:	n/a
3	chr7:105028539-105028589	HepG2	liver:	n/a
4	chr7:105160482-105160532	NH-A	brain:	n/a
5	chr7:105029385-105029435	GM06990	blood:	n/a
6	chr7:105029492-105029542	SKMC	muscle:	n/a
7	chr7:105028539-105028589	HepG2	liver:	n/a
8	chr7:105160482-105160532	NH-A	brain:	n/a
9	chr7:105027541-105027591	SKMC	muscle:	n/a
10	chr7:105160482-105160532	HepG2	liver:	n/a
11	chr7:105134734-105134784	Jurkat	blood:	n/a
12	chr7:105029125-105029175	U87	brain:	n/a
13	chr7:105162761-105162811	GM12878	blood:	n/a
14	chr7:105029499-105029549	T-47D	breast:	n/a
15	chr7:105162761-105162811	GM06990	blood:	n/a
16	chr7:105162600-105162650	Caco-2	colon:	n/a
17	chr7:105162761-105162811	CMK	blood:	n/a
18	chr7:105162855-105162905	HCPEpiC	choroid plexus:	n/a
19	chr7:105162941-105162991	H1-hESC	embryonic stem cell:	embryo
20	chr7:105029895-105029945	HRCEpiC	kidney:	n/a
21	chr7:105026171-105026221	HIPEpiC	eye:	n/a
22	chr7:105030752-105030802	ovcar-3	ovarian:	n/a
23	chr7:105029385-105029435	Hela-S3	cervix:	n/a
24	chr7:105134734-105134784	HRE	kidney:	n/a
25	chr7:105162855-105162905	SKMC	muscle:	n/a
26	chr7:105094993-105095043	GM19239	blood:	n/a
27	chr7:105030168-105030218	HCPEpiC	choroid plexus:	n/a
28	chr7:105162878-105162928	HRPEpiC	eye:	n/a
29	chr7:105162941-105162991	GM06990	blood:	n/a
30	chr7:105018109-105018159	HCF	heart:	n/a
31	chr7:105134734-105134784	Hela-S3	cervix:	n/a
32	chr7:105160482-105160532	PANC-1	pancreas:	n/a
33	chr7:105029485-105029535	NHBE	bronchial:	n/a
34	chr7:105097168-105097218	Jurkat	blood:	n/a
35	chr7:105162888-105162938	GM19239	blood:	n/a
36	chr7:105028539-105028589	SK-N-SH	brain:	n/a
37	chr7:105029385-105029435	AG04450	lung:	fetal
38	chr7:105134734-105134784	AG04450	lung:	fetal
39	chr7:105137683-105137733	NHDF-neo	bronchial:	n/a
40	chr7:105029125-105029175	ECC-1	luminal epithelium:	n/a
41	chr7:105162859-105162909	SAEC	small airway:	n/a
42	chr7:105029895-105029945	U87	brain:	n/a
43	chr7:105160482-105160532	K562	blood:	n/a
44	chr7:105112740-105112790	GM06990	blood:	n/a
45	chr7:105027541-105027591	HL-60	blood:	n/a
46	chr7:105162735-105162785	Hepatocyte	liver:	n/a
47	chr7:105029492-105029542	GM19239	blood:	n/a
48	chr7:105162941-105162991	ovcar-3	ovarian:	n/a
49	chr7:105162735-105162785	HUVEC	blood vessel:	n/a
50	chr7:105162470-105162520	SK-N-SH_RA	brain:	n/a

(count:201 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr7:105108727..105111208-chr7:105115281..105117815,3	K562	blood:
2	chr7:105039517..105040114-chr7:105128184..105128801,2	MCF-7	breast:
3	chr7:105041915..105043798-chr7:105045520..105047244,3	K562	blood:
4	chr7:105027746..105030082-chr7:105160759..105163665,5	MCF-7	breast:
5	chr7:105110346..105111937-chr7:105127717..105129867,2	K562	blood:
6	chr7:105123891..105126807-chr7:105127065..105130619,3	K562	blood:
7	chr7:105103194..105105383-chr7:105105621..105108054,3	K562	blood:
8	chr7:105012234..105014245-chr7:105022510..105026066,3	K562	blood:
9	chr7:105110346..105111937-chr7:105127717..105129867,2	K562	blood:
10	chr7:105041915..105043798-chr7:105045520..105047244,3	K562	blood:
11	chr7:105069861..105070836-chr7:105128119..105128880,2	MCF-7	breast:
12	chr7:105083591..105086006-chr7:105160365..105162043,2	K562	blood:
13	chr7:105095176..105096749-chr7:105098441..105100955,2	MCF-7	breast:
14	chr7:104651368..104653205-chr7:105026206..105027848,2	K562	blood:
15	chr7:105016302..105018652-chr7:105027482..105029964,4	K562	blood:
16	chr7:105134519..105138273-chr7:105140684..105142940,4	K562	blood:
17	chr7:105038088..105039818-chr7:105043302..105044810,2	K562	blood:
18	chr7:104653054..104655993-chr7:105161169..105164095,3	MCF-7	breast:
19	chr7:105041786..105042328-chr7:105128303..105129103,3	MCF-7	breast:
20	chr7:104653211..104654776-chr7:105027099..105029228,2	K562	blood:
21	chr7:105029590..105031238-chr7:105038445..105041248,2	MCF-7	breast:
22	chr7:105125271..105127106-chr7:105136833..105138910,2	K562	blood:
23	chr7:105162283..105162894-chr7:105172462..105173034,2	NB4	blood:
24	chr7:105123891..105126807-chr7:105127065..105130619,3	K562	blood:
25	chr19:55628556..55629065-chr7:105162615..105163265,2	Hela-S3	cervix:
26	chr7:104651944..104654760-chr7:105154090..105156667,3	K562	blood:
27	chr7:105028707..105032086-chr7:105067490..105070575,3	K562	blood:
28	chr7:105070328..105070998-chr7:105230063..105230628,2	K562	blood:
29	chr7:105121563..105123153-chr7:105161155..105163117,2	MCF-7	breast:
30	chr7:105152955..105155476-chr7:105155749..105158829,5	K562	blood:
31	chr7:105039956..105042512-chr7:105104408..105106506,2	K562	blood:
32	chr1:209957159..209957989-chr7:105162027..105162579,2	Hela-S3	cervix:
33	chr7:105148185..105149870-chr7:105160014..105161672,2	K562	blood:
34	chr7:105094953..105097499-chr7:105172737..105175685,2	K562	blood:
35	chr7:105029590..105031238-chr7:105038445..105041248,2	MCF-7	breast:
36	chr7:105143576..105146396-chr7:105147042..105149947,3	K562	blood:
37	chr7:105027071..105030527-chr7:105095763..105098466,3	K562	blood:
38	chr7:104622804..104624627-chr7:105113661..105116251,2	K562	blood:
39	chr7:105019571..105021474-chr7:105027326..105029018,2	MCF-7	breast:
40	chr7:65958424..65959012-chr7:105162357..105162865,2	NB4	blood:
41	chr7:105111430..105113380-chr7:105117315..105120062,2	K562	blood:
42	chr7:105126422..105132557-chr7:105160120..105164281,5	MCF-7	breast:
43	chr7:105033753..105035269-chr7:105037769..105040166,2	K562	blood:
44	chr7:105090469..105092100-chr7:105095217..105096775,2	MCF-7	breast:
45	chr7:105152955..105155476-chr7:105155749..105158829,5	K562	blood:
46	chr7:105027206..105036314-chr7:105036751..105044757,13	K562	blood:
47	chr7:104652744..104654842-chr7:105028526..105031470,2	MCF-7	breast:
48	chr7:105160261..105165362-chr7:105168599..105174293,22	MCF-7	breast:
49	chr7:105083940..105087066-chr7:105087136..105090105,3	K562	blood:
50	chr7:105148994..105150495-chr7:105172517..105174104,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SRPK2-5	chr7:105029095-105029149	NONHSAT122614
2	lnc-SRPK2-5	chr7:105029691-105029837	NONHSAT122614

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	PUS7	hsa-miR-155-5p	chr7:105097684-105097705
2	PUS7	hsa-miR-32-5p	chr7:105098074-105098095

Variant related genes	Relation type
PUS7	TF binding region
SRPK2	TF binding region
PUS7	CpG island
SRPK2	CpG island
ENSG00000172244	chromatin interactions
ENSG00000201179	chromatin interactions
ENSG00000228393	chromatin interactions
ENSG00000233797	chromatin interactions
ENSG00000239569	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000125503	chromatin interactions
ENSG00000080298	chromatin interactions
ENSG00000150756	chromatin interactions
ENSG00000143303	chromatin interactions
ENSG00000162757	chromatin interactions
ENSG00000099622	chromatin interactions
ENSG00000072210	chromatin interactions
ENSG00000146776	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000135250	chromatin interactions
ENSG00000223886	chromatin interactions
ENSG00000091127	chromatin interactions
ENSG00000231167	chromatin interactions
ENSG00000143319	chromatin interactions
ENSG00000014123	chromatin interactions
ENSG00000237310	chromatin interactions
ENSG00000150753	chromatin interactions
ENSG00000185055	chromatin interactions
ENSG00000128536	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000005483	chromatin interactions
ENSG00000135249	chromatin interactions
ENSG00000223473	chromatin interactions

Extended variants
information (count: 5878 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:5878 , 50 per page) page: 1 2 3 4 5 6 7 ... 118

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10261782	chr7:105012975-105012976	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs78885711	chr7:105012989-105012990	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs190972590	chr7:105012993-105012994	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs536904733	chr7:105013110-105013111	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs533255888	chr7:105013118-105013119	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs182406010	chr7:105013120-105013121	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs551314913	chr7:105013138-105013139	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs554886294	chr7:105013254-105013255	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs530117539	chr7:105013275-105013276	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs147650422	chr7:105013307-105013308	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs570169030	chr7:105013334-105013335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs140878292	chr7:105013379-105013380	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs34071375	chr7:105013386-105013387	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs186434787	chr7:105013397-105013398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs565991792	chr7:105013411-105013412	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs533582260	chr7:105013427-105013428	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs149731724	chr7:105013443-105013444	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs573706998	chr7:105013492-105013493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs145567351	chr7:105013497-105013498	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs148866421	chr7:105013540-105013541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs73188305	chr7:105013550-105013551	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs545183872	chr7:105013558-105013559	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs565222966	chr7:105013565-105013566	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs191202698	chr7:105013617-105013618	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs117408638	chr7:105013647-105013648	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs376213467	chr7:105013669-105013670	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs561108188	chr7:105013701-105013702	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs79123544	chr7:105013736-105013737	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs183412340	chr7:105013782-105013783	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs17270450	chr7:105013788-105013789	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs61190714	chr7:105013824-105013825	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs34073549	chr7:105013825-105013826	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs13232477	chr7:105013835-105013836	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs397970137	chr7:105013836-105013837	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs576546408	chr7:105013837-105013838	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs201843898	chr7:105013845-105013846	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs376683222	chr7:105013851-105013852	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs60572082	chr7:105013867-105013868	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs369723191	chr7:105013872-105013873	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs552343428	chr7:105013873-105013874	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs188463283	chr7:105013875-105013876	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs192941216	chr7:105013878-105013879	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs183124863	chr7:105013915-105013916	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs10236872	chr7:105013929-105013930	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs540106719	chr7:105013978-105013979	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs567174598	chr7:105013982-105013983	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs558132324	chr7:105013994-105013995	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs555996337	chr7:105014033-105014034	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs569726475	chr7:105014046-105014047	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs543971102	chr7:105014062-105014063	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Prostate cancer	18632612	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	16573809	CNVD
Myxofibrosarcoma	20639860	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2953 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104995200-105028200	Weak transcription	Esophagus	oesophagus
2	chr7:104995400-105028000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr7:104995600-105027200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr7:104995800-105027200	Weak transcription	Primary T cells from cord blood	blood
5	chr7:104996400-105017000	Weak transcription	Fetal Muscle Leg	muscle
6	chr7:104997400-105013000	Weak transcription	Dnd41	blood
7	chr7:104997400-105026800	Weak transcription	Primary B cells from cord blood	blood
8	chr7:105000000-105018000	Weak transcription	Lung	lung
9	chr7:105000000-105021800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr7:105000000-105028200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr7:105000200-105025800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr7:105003200-105027600	Weak transcription	Fetal Intestine Small	intestine
13	chr7:105003600-105025200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr7:105005000-105021200	Weak transcription	Fetal Stomach	stomach
15	chr7:105005600-105014400	Weak transcription	Ovary	ovary
16	chr7:105006200-105017400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr7:105006200-105027600	Weak transcription	Hela-S3	cervix
18	chr7:105006400-105021400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr7:105006400-105027400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr7:105008000-105017600	Weak transcription	Gastric	stomach
21	chr7:105008200-105015800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr7:105008200-105028200	Weak transcription	Pancreas	Pancrea
23	chr7:105008800-105013200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
24	chr7:105009200-105015600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr7:105009200-105018600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
26	chr7:105009200-105027200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr7:105009200-105028000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr7:105009200-105028000	Weak transcription	Psoas Muscle	Psoas
29	chr7:105009600-105018000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr7:105010000-105017400	Weak transcription	Primary B cells from peripheral blood	blood
31	chr7:105010000-105027400	Weak transcription	Muscle Satellite Cultured Cells	--
32	chr7:105010800-105015800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
33	chr7:105010800-105017600	Weak transcription	Sigmoid Colon	Sigmoid Colon
34	chr7:105011000-105014800	Weak transcription	HUVEC	blood vessel
35	chr7:105011000-105015800	Weak transcription	A549	lung
36	chr7:105011400-105017800	Weak transcription	Primary T cells fromperipheralblood	blood
37	chr7:105011800-105013000	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr7:105012000-105015200	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr7:105012200-105017400	Weak transcription	HepG2	liver
40	chr7:105013000-105013400	Enhancers	Primary T helper cells fromperipheralblood	blood
41	chr7:105013000-105013600	Enhancers	Dnd41	blood
42	chr7:105013200-105015800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr7:105013400-105015800	Weak transcription	Primary T helper cells fromperipheralblood	blood
44	chr7:105013600-105015800	Weak transcription	Dnd41	blood
45	chr7:105014400-105016000	Enhancers	Ovary	ovary
46	chr7:105014800-105016400	Enhancers	HUVEC	blood vessel
47	chr7:105015200-105015400	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr7:105015200-105017000	Enhancers	Primary T helper cells PMA-I stimulated	--
49	chr7:105015400-105016400	Enhancers	Primary T killer memory cells from peripheral blood	blood
50	chr7:105015400-105017400	Weak transcription	HUES48 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links