Variant report

Variant	nsv890349
Chromosome Location	chr8:10294330-10355302
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:10302131-10302441	K562	blood:	n/a	n/a
2	ARID3A	chr8:10318722-10318795	K562	blood:	n/a	n/a
3	BACH1	chr8:10302241-10302446	K562	blood:	n/a	n/a
4	BHLHE40	chr8:10302225-10302331	K562	blood:	n/a	n/a
5	CEBPB	chr8:10310687-10310906	K562	blood:	n/a	n/a
6	CEBPB	chr8:10353180-10353362	HepG2	liver:	n/a	n/a
7	CEBPB	chr8:10310668-10310999	HepG2	liver:	n/a	n/a
8	CEBPB	chr8:10353239-10353251	IMR90	lung:	n/a	n/a
9	CEBPB	chr8:10310563-10310956	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr8:10310657-10310992	IMR90	lung:	n/a	n/a
11	CTCF	chr8:10331980-10332130	GM12873	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
12	CTCF	chr8:10332000-10332150	AG10803	skin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
13	CTCF	chr8:10342520-10342670	MCF-7	breast:	n/a	n/a
14	CTCF	chr8:10331942-10332123	A549	lung:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
15	CTCF	chr8:10337240-10337390	GM12871	blood:	n/a	n/a
16	CTCF	chr8:10332040-10332190	WI-38	lung:	n/a	chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
17	CTCF	chr8:10331960-10332110	HMF	breast:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
18	CTCF	chr8:10331940-10332141	MCF-7	breast:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
19	CTCF	chr8:10342544-10342622	MCF-7	breast:	n/a	n/a
20	CTCF	chr8:10331980-10332130	SK-N-SH_RA	brain:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
21	CTCF	chr8:10331958-10332129	Hela-S3	cervix:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
22	CTCF	chr8:10342500-10342650	HEK293	kidney:	n/a	n/a
23	CTCF	chr8:10331940-10332090	AG10803	skin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
24	CTCF	chr8:10331940-10332090	HL-60	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
25	CTCF	chr8:10331958-10332132	NHEK	skin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
26	CTCF	chr8:10342536-10342638	MCF-7	breast:	n/a	n/a
27	CTCF	chr8:10332000-10332150	HUVEC	blood vessel:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
28	CTCF	chr8:10332020-10332170	HRPEpiC	eye:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
29	CTCF	chr8:10331941-10332147	MCF-7	breast:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
30	CTCF	chr8:10331940-10332090	GM12872	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
31	CTCF	chr8:10332020-10332170	HFF	foreskin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
32	CTCF	chr8:10342552-10342641	GM19240	blood:	n/a	n/a
33	CTCF	chr8:10342520-10342670	AG09309	skin:	n/a	n/a
34	CTCF	chr8:10331960-10332110	AG04449	skin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
35	CTCF	chr8:10331940-10332090	GM12874	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
36	CTCF	chr8:10331980-10332130	K562	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
37	CTCF	chr8:10342504-10342668	Medullo	brain:	n/a	n/a
38	CTCF	chr8:10332005-10332117	GM12878	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
39	CTCF	chr8:10331940-10332090	GM12878	blood:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
40	CTCF	chr8:10331840-10331990	RPTEC	kidney:	n/a	n/a
41	CTCF	chr8:10331980-10332130	Caco-2	colon:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
42	CTCF	chr8:10342480-10342630	BE2_C	brain:	n/a	n/a
43	CTCF	chr8:10331935-10332165	Gliobla	brain:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
44	CTCF	chr8:10331920-10332070	NHDF-neo	bronchial:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
45	CTCF	chr8:10331992-10332084	Fibrobl	skin:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
46	CTCF	chr8:10331941-10332186	HepG2	liver:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
47	CTCF	chr8:10331850-10332193	H1-hESC	embryonic stem cell:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
48	CTCF	chr8:10331960-10332110	HRPEpiC	eye:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
49	CTCF	chr8:10331980-10332130	BE2_C	brain:	n/a	chr8:10332039-10332057 chr8:10332045-10332054 chr8:10332040-10332056 chr8:10332042-10332052 chr8:10332041-10332054
50	CTCF	chr8:10330660-10330810	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:10339449-10339499	SK-N-SH	brain:	n/a
2	chr8:10339449-10339499	Hepatocyte	liver:	n/a
3	chr8:10339410-10339460	A549	lung:	n/a
4	chr8:10339477-10339527	ovcar-3	ovarian:	n/a
5	chr8:10339410-10339460	U87	brain:	n/a
6	chr8:10339477-10339527	GM12892	blood:	n/a
7	chr8:10339410-10339460	HPAEpiC	pulmonary alveolar:	n/a
8	chr8:10339477-10339527	HepG2	liver:	n/a
9	chr8:10339449-10339499	AG09319	gingival:	n/a
10	chr8:10339477-10339527	AG04449	skin:	fetal
11	chr8:10339477-10339527	HUVEC	blood vessel:	n/a
12	chr8:10339477-10339527	AG10803	skin:	n/a
13	chr8:10339449-10339499	BJ	skin:	n/a
14	chr8:10339477-10339527	U87	brain:	n/a
15	chr8:10339477-10339527	Caco-2	colon:	n/a
16	chr8:10339477-10339527	AG09319	gingival:	n/a
17	chr8:10339449-10339499	AG04450	lung:	fetal
18	chr8:10339410-10339460	K562	blood:	n/a
19	chr8:10339449-10339499	HUVEC	blood vessel:	n/a
20	chr8:10339410-10339460	GM12892	blood:	n/a
21	chr8:10339410-10339460	HEK293	kidney:	embryo
22	chr8:10339477-10339527	PANC-1	pancreas:	n/a
23	chr8:10339410-10339460	Caco-2	colon:	n/a
24	chr8:10339477-10339527	NT2-D1	testis:	n/a
25	chr8:10339410-10339460	PANC-1	pancreas:	n/a
26	chr8:10339410-10339460	MCF10A-Er-Src	breast:	n/a
27	chr8:10339410-10339460	HIPEpiC	eye:	n/a
28	chr8:10339449-10339499	LNCaP	prostate:	n/a
29	chr8:10339449-10339499	ovcar-3	ovarian:	n/a
30	chr8:10339449-10339499	BE2_C	brain:	n/a
31	chr8:10339477-10339527	SK-N-SH	brain:	n/a
32	chr8:10339410-10339460	MCF-7	breast:	n/a
33	chr8:10339410-10339460	PFSK-1	brain:	n/a
34	chr8:10339449-10339499	AoSMC	blood vessel:	n/a
35	chr8:10339477-10339527	SK-N-MC	brain:	n/a
36	chr8:10339477-10339527	SK-N-SH_RA	brain:	n/a
37	chr8:10339449-10339499	NH-A	brain:	n/a
38	chr8:10339410-10339460	PrEC	prostate:	n/a
39	chr8:10339449-10339499	AG04449	skin:	fetal
40	chr8:10339410-10339460	NB4	blood:	n/a
41	chr8:10339477-10339527	HRCEpiC	kidney:	n/a
42	chr8:10339410-10339460	Hepatocyte	liver:	n/a
43	chr8:10339410-10339460	HepG2	liver:	n/a
44	chr8:10339410-10339460	SK-N-SH_RA	brain:	n/a
45	chr8:10339410-10339460	Hela-S3	cervix:	n/a
46	chr8:10339410-10339460	ECC-1	luminal epithelium:	n/a
47	chr8:10339477-10339527	HCPEpiC	choroid plexus:	n/a
48	chr8:10339410-10339460	SK-N-SH	brain:	n/a
49	chr8:10339477-10339527	CMK	blood:	n/a
50	chr8:10339410-10339460	GM06990	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:10300339..10303104-chr8:10303257..10306151,2	K562	blood:
2	chr8:10300339..10303104-chr8:10303257..10306151,2	K562	blood:
3	chr8:10306242..10308473-chr8:10310068..10312588,2	K562	blood:
4	chr8:10281970..10284229-chr8:10318464..10320467,2	K562	blood:
5	chr8:10331191..10333383-chr8:10342162..10343803,2	K562	blood:
6	chr8:10295156..10295676-chr9:36400867..36401557,2	MCF-7	breast:
7	chr8:10306242..10308473-chr8:10310068..10312588,2	K562	blood:
8	chr8:10302259..10303778-chr8:10306329..10308452,2	K562	blood:
9	chr8:10339831..10342686-chr8:10351596..10354401,2	K562	blood:
10	chr8:10293147..10295471-chr8:10296811..10299239,2	K562	blood:
11	chr8:10354981..10356496-chr8:10377351..10379387,2	K562	blood:
12	chr8:10290739..10292284-chr8:10294138..10295858,2	K562	blood:
13	chr8:10302259..10303778-chr8:10306329..10308452,2	K562	blood:
14	chr8:10293147..10295471-chr8:10296811..10299239,2	K562	blood:
15	chr8:10339831..10342686-chr8:10351596..10354401,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP1L1-3	chr8:10336042-10336065	NONHSAT124995
2	lnc-PRSS55-1	chr8:10343339-10343382	NONHSAT124999
3	lnc-PRSS55-1	chr8:10337649-10337702	ENSG00000253641
4	lnc-RP1L1-2	chr8:10341597-10342143	NONHSAT124998
5	lnc-RP1L1-2	chr8:10340434-10340741	ENSG00000253649.1
6	lnc-RP1L1-2	chr8:10341708-10341756	ENSG00000253649.1
7	lnc-RP1L1-3	chr8:10336688-10336899	NONHSAT124995
8	lnc-PRSS55-1	chr8:10335271-10335408	ENSG00000253641
9	lnc-MSRA-1	chr8:10291182-10295822	ENSG00000261451.1
10	lnc-PRSS55-1	chr8:10335271-10335408	ENSG00000253641
11	lnc-PRSS55-1	chr8:10334633-10334804	ENSG00000253641
12	lnc-MSRA-1	chr8:10293466-10295495	NONHSAT124987
13	lnc-RP1L1-3	chr8:10336688-10336885	ENSG00000253678
14	lnc-PRSS55-1	chr8:10338692-10338976	ENSG00000253641
15	lnc-RP1L1-3	chr8:10334630-10335291	NONHSAT124992
16	lnc-RP1L1-2	chr8:10341597-10341613	ENSG00000253649.1
17	lnc-PRSS55-1	chr8:10339916-10340804	NONHSAT124999
18	lnc-PRSS55-1	chr8:10335380-10335408	ENSG00000253641
19	lnc-PRSS55-1	chr8:10334709-10334793	ENSG00000253641
20	lnc-RP1L1-2	chr8:10354145-10354320	NONHSAT124998
21	lnc-PRSS55-1	chr8:10337671-10337702	NONHSAT124996
22	lnc-RP1L1-2	chr8:10338909-10340741	NONHSAT124998
23	lnc-PRSS55-1	chr8:10339371-10339484	ENSG00000253641
24	lnc-PRSS55-1	chr8:10345921-10346428	NONHSAT124996
25	lnc-PRSS55-1	chr8:10338056-10338496	ENSG00000253641
26	lnc-MSRA-3	chr8:10312147-10312190	NONHSAT124989
27	lnc-PRSS55-1	chr8:10339371-10340804	NONHSAT124996
28	lnc-PRSS55-1	chr8:10337649-10337702	ENSG00000253641
29	lnc-PRSS55-1	chr8:10344317-10347176	ENSG00000272505.1
30	lnc-MSRA-3	chr8:10328326-10328856	NONHSAT124989
31	lnc-PRSS55-1	chr8:10344317-10346944	NONHSAT125003
32	lnc-PRSS55-1	chr8:10342683-10343382	NONHSAT125000
33	lnc-MSRA-2	chr8:10305529-10308687	NONHSAT124988
34	lnc-MSRA-2	chr8:10305072-10305433	NONHSAT124988
35	lnc-PRSS55-1	chr8:10337649-10337702	ENSG00000253641
36	lnc-RP1L1-3	chr8:10336688-10336899	NONHSAT124992
37	lnc-PRSS55-1	chr8:10339916-10340804	NONHSAT125000
38	lnc-PRSS55-1	chr8:10332075-10332141	ENSG00000253641
39	lnc-RP1L1-3	chr8:10335001-10335291	ENSG00000253678

Variant related genes	Relation type
RNU6-729P	TF binding region
ENSG00000253678	TF binding region
ENSG00000272505	TF binding region
ENSG00000253641	TF binding region
RNU6-729P	CpG island
ENSG00000253678	CpG island
ENSG00000272505	CpG island
ENSG00000253641	CpG island
ENSG00000261451	chromatin interactions
ENSG00000137075	chromatin interactions
ENSG00000253641	chromatin interactions

Extended variants
information (count: 3707 )
Associated
traits (count: 139 )

Variant overlapped rSNPs/rCNVs (count:3707 , 50 per page) page: 1 2 3 4 5 6 7 ... 75

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4841339	chr8:10294330-10294331	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs552339468	chr8:10294332-10294333	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs374672966	chr8:10294345-10294346	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs532821962	chr8:10294358-10294359	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
5	rs4840482	chr8:10294379-10294380	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs182015785	chr8:10294390-10294391	Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
7	rs147199020	chr8:10294428-10294429	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
8	rs7815712	chr8:10294429-10294430	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
9	rs574726710	chr8:10294436-10294437	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
10	rs537086378	chr8:10294475-10294476	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
11	rs140533650	chr8:10294564-10294565	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
12	rs372103225	chr8:10294626-10294627	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
13	rs149740578	chr8:10294717-10294718	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
14	rs145666077	chr8:10294732-10294733	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
15	rs148927694	chr8:10294774-10294775	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs74815458	chr8:10294778-10294779	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
17	rs576173442	chr8:10294779-10294780	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
18	rs186354751	chr8:10294790-10294791	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
19	rs142799059	chr8:10294803-10294804	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
20	rs4478621	chr8:10294818-10294819	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs547070047	chr8:10294829-10294830	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
22	rs562243921	chr8:10294832-10294833	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
23	rs563776415	chr8:10294838-10294839	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
24	rs146564844	chr8:10294842-10294843	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs552464562	chr8:10294853-10294854	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
26	rs570436494	chr8:10294857-10294858	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs530975707	chr8:10294916-10294917	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs141306443	chr8:10294925-10294926	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs370220830	chr8:10294939-10294940	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs190310914	chr8:10294962-10294963	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs539546351	chr8:10294968-10294969	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs548808053	chr8:10294969-10294970	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs568451321	chr8:10294972-10294973	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs373079168	chr8:10294977-10294978	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs4271011	chr8:10294984-10294985	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs181511352	chr8:10294994-10294995	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs570881420	chr8:10294998-10294999	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs4284076	chr8:10295007-10295008	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs369183440	chr8:10295009-10295010	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs556508016	chr8:10295035-10295036	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs7821008	chr8:10295037-10295038	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs541657650	chr8:10295040-10295041	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs555579090	chr8:10295063-10295064	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs145093663	chr8:10295075-10295076	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs540758364	chr8:10295103-10295104	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs563701522	chr8:10295110-10295111	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs7460852	chr8:10295112-10295113	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs546039300	chr8:10295113-10295114	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs138952392	chr8:10295131-10295132	Strong transcription Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs11782465	chr8:10295160-10295161	Strong transcription Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:139)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Epilepsy	20502679	CNVD
Osteosarcoma	21215367	CNVD
Gastric cancer	21811585	CNVD

Chromatin state (count:246 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10282600-10295200	Strong transcription	Primary neutrophils fromperipheralblood	blood
2	chr8:10283200-10295200	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr8:10285800-10305200	Weak transcription	Lung	lung
4	chr8:10291400-10301200	Weak transcription	Pancreas	Pancrea
5	chr8:10292200-10294400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr8:10292200-10321400	Weak transcription	Fetal Brain Male	brain
7	chr8:10292400-10294400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr8:10293600-10294400	Strong transcription	Left Ventricle	heart
9	chr8:10293800-10294400	ZNF genes & repeats	Primary T cells from cord blood	blood
10	chr8:10294000-10296200	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr8:10294000-10302400	Weak transcription	Stomach Smooth Muscle	stomach
12	chr8:10294000-10304000	Weak transcription	Fetal Brain Female	brain
13	chr8:10294200-10302800	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr8:10294200-10306600	Weak transcription	Liver	Liver
15	chr8:10294400-10296200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:10294400-10301400	Weak transcription	Left Ventricle	heart
17	chr8:10294400-10303200	Weak transcription	Primary T cells from cord blood	blood
18	chr8:10294400-10304800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr8:10295200-10301200	Weak transcription	Primary neutrophils fromperipheralblood	blood
20	chr8:10299800-10300000	ZNF genes & repeats	Aorta	Aorta
21	chr8:10300000-10303200	Weak transcription	Aorta	Aorta
22	chr8:10301200-10301400	ZNF genes & repeats	Pancreas	Pancrea
23	chr8:10301200-10301600	Enhancers	Brain Anterior Caudate	brain
24	chr8:10301200-10302200	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
25	chr8:10301400-10305000	Weak transcription	Pancreas	Pancrea
26	chr8:10301600-10302800	Weak transcription	Brain Anterior Caudate	brain
27	chr8:10301800-10303200	Enhancers	K562	blood
28	chr8:10302200-10303800	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr8:10302800-10303200	Enhancers	Brain Cingulate Gyrus	brain
30	chr8:10302800-10303600	Enhancers	Brain Anterior Caudate	brain
31	chr8:10302800-10303600	Enhancers	Brain Inferior Temporal Lobe	brain
32	chr8:10303000-10303200	Enhancers	Brain Substantia Nigra	brain
33	chr8:10303000-10303600	Enhancers	Brain Hippocampus Middle	brain
34	chr8:10303200-10303400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr8:10303200-10303600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr8:10303200-10303600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr8:10303400-10303600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
38	chr8:10303400-10303800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr8:10303400-10303800	Enhancers	Brain Angular Gyrus	brain
40	chr8:10303600-10303800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
41	chr8:10303600-10303800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
42	chr8:10304000-10304400	Strong transcription	Fetal Brain Female	brain
43	chr8:10304400-10328200	Weak transcription	Fetal Brain Female	brain
44	chr8:10304800-10305200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr8:10305400-10305600	Weak transcription	Pancreas	Pancrea
46	chr8:10308800-10314800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr8:10310800-10321000	Weak transcription	Pancreas	Pancrea
48	chr8:10312000-10312200	Enhancers	Duodenum Smooth Muscle	Duodenum
49	chr8:10312000-10312200	Enhancers	Fetal Lung	lung
50	chr8:10312200-10314000	Weak transcription	Fetal Lung	lung

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