Variant report

Variant	nsv891939
Chromosome Location	chr9:10001-129899
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2357)
CpG islands
(count:1223)
Chromatin interactive
region (count:0)
LncRNA
region (count:52)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:2357 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:11385-11575	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:94438-94633	K562	blood:	n/a	chr9:94582-94598
3	ARID3A	chr9:95057-95158	K562	blood:	n/a	n/a
4	ATF1	chr9:94435-94576	K562	blood:	n/a	n/a
5	ATF1	chr9:44552-44676	K562	blood:	n/a	n/a
6	ATF3	chr9:44488-44733	K562	blood:	n/a	n/a
7	ATF3	chr9:11302-11484	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr9:11321-11456	K562	blood:	n/a	n/a
9	ATF3	chr9:10197-10480	A549	lung:	n/a	n/a
10	ATF3	chr9:11273-11504	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr9:114203-114262	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr9:63102-63125	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr9:113631-113796	H1-hESC	embryonic stem cell:	n/a	n/a
14	BATF	chr9:11788-12224	GM12878	blood:	n/a	n/a
15	BATF	chr9:9979-10330	GM12878	blood:	n/a	n/a
16	BATF	chr9:26062-26579	GM12878	blood:	n/a	n/a
17	BATF	chr9:27260-27465	GM12878	blood:	n/a	n/a
18	BATF	chr9:31973-32255	GM12878	blood:	n/a	n/a
19	BATF	chr9:10173-10378	GM12878	blood:	n/a	n/a
20	BATF	chr9:116510-116717	GM12878	blood:	n/a	n/a
21	BATF	chr9:88665-89067	GM12878	blood:	n/a	chr9:88843-88853 chr9:88842-88853
22	BATF	chr9:28993-29489	GM12878	blood:	n/a	n/a
23	BATF	chr9:122820-123095	GM12878	blood:	n/a	n/a
24	BATF	chr9:11755-12334	GM12878	blood:	n/a	n/a
25	BATF	chr9:88649-88891	GM12878	blood:	n/a	chr9:88843-88853 chr9:88842-88853
26	BATF	chr9:32954-33132	GM12878	blood:	n/a	n/a
27	BATF	chr9:29512-29973	GM12878	blood:	n/a	n/a
28	BATF	chr9:12501-12737	GM12878	blood:	n/a	n/a
29	BATF	chr9:120835-121041	GM12878	blood:	n/a	n/a
30	BATF	chr9:26398-26595	GM12878	blood:	n/a	n/a
31	BATF	chr9:63198-63553	GM12878	blood:	n/a	chr9:63315-63325
32	BATF	chr9:16236-16435	GM12878	blood:	n/a	n/a
33	BATF	chr9:28725-28963	GM12878	blood:	n/a	n/a
34	BATF	chr9:14010-14300	GM12878	blood:	n/a	n/a
35	BATF	chr9:11200-11575	GM12878	blood:	n/a	n/a
36	BATF	chr9:29664-29991	GM12878	blood:	n/a	n/a
37	BATF	chr9:74610-74907	GM12878	blood:	n/a	n/a
38	BATF	chr9:27604-27796	GM12878	blood:	n/a	chr9:27703-27714
39	BATF	chr9:13366-13660	GM12878	blood:	n/a	n/a
40	BATF	chr9:63237-63452	GM12878	blood:	n/a	chr9:63315-63325
41	BATF	chr9:74615-74984	GM12878	blood:	n/a	n/a
42	BATF	chr9:22403-22601	GM12878	blood:	n/a	n/a
43	BATF	chr9:16237-16459	GM12878	blood:	n/a	n/a
44	BATF	chr9:14336-14569	GM12878	blood:	n/a	n/a
45	BCL11A	chr9:74907-75114	GM12878	blood:	n/a	n/a
46	BCL11A	chr9:19788-20108	GM12878	blood:	n/a	n/a
47	BCL11A	chr9:10065-10484	GM12878	blood:	n/a	n/a
48	BCL11A	chr9:15658-15840	GM12878	blood:	n/a	n/a
49	BCL11A	chr9:11692-12881	GM12878	blood:	n/a	n/a
50	BCL11A	chr9:17165-17472	GM12878	blood:	n/a	chr9:17207-17220

(count:1223 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:118698-118748	GM12891	blood:	n/a
2	chr9:112937-112987	GM12892	blood:	n/a
3	chr9:114359-114409	AoSMC	blood vessel:	n/a
4	chr9:118698-118748	GM12891	blood:	n/a
5	chr9:112937-112987	GM12892	blood:	n/a
6	chr9:114359-114409	AoSMC	blood vessel:	n/a
7	chr9:114359-114409	HAEpiC	amniotic membrane:	n/a
8	chr9:114434-114484	CMK	blood:	n/a
9	chr9:118698-118748	GM12878	blood:	n/a
10	chr9:72908-72958	HNPCEpiC	eye:	n/a
11	chr9:104568-104618	MCF10A-Er-Src	breast:	n/a
12	chr9:117044-117094	SK-N-SH_RA	brain:	n/a
13	chr9:73704-73754	GM12878	blood:	n/a
14	chr9:72908-72958	T-47D	breast:	n/a
15	chr9:113530-113580	HRPEpiC	eye:	n/a
16	chr9:118698-118748	HCM	heart:	n/a
17	chr9:114838-114888	HIPEpiC	eye:	n/a
18	chr9:113530-113580	HEK293	kidney:	embryo
19	chr9:114838-114888	LNCaP	prostate:	n/a
20	chr9:118698-118748	HCT-116	colon:	n/a
21	chr9:118091-118141	SAEC	small airway:	n/a
22	chr9:114838-114888	HUVEC	blood vessel:	n/a
23	chr9:114434-114484	SK-N-SH	brain:	n/a
24	chr9:118530-118580	PANC-1	pancreas:	n/a
25	chr9:72908-72958	ECC-1	luminal epithelium:	n/a
26	chr9:73704-73754	SAEC	small airway:	n/a
27	chr9:73704-73754	HCPEpiC	choroid plexus:	n/a
28	chr9:73704-73754	HEK293	kidney:	embryo
29	chr9:73835-73885	A549	lung:	n/a
30	chr9:114359-114409	HCPEpiC	choroid plexus:	n/a
31	chr9:118698-118748	HCPEpiC	choroid plexus:	n/a
32	chr9:112618-112668	SK-N-SH_RA	brain:	n/a
33	chr9:104568-104618	BE2_C	brain:	n/a
34	chr9:112618-112668	CMK	blood:	n/a
35	chr9:112618-112668	HPAEpiC	pulmonary alveolar:	n/a
36	chr9:118091-118141	K562	blood:	n/a
37	chr9:117608-117658	LNCaP	prostate:	n/a
38	chr9:114359-114409	HRPEpiC	eye:	n/a
39	chr9:72908-72958	NB4	blood:	n/a
40	chr9:109039-109089	LNCaP	prostate:	n/a
41	chr9:11410-11460	HIPEpiC	eye:	n/a
42	chr9:114359-114409	GM12891	blood:	n/a
43	chr9:72908-72958	HUVEC	blood vessel:	n/a
44	chr9:73568-73618	HPAEpiC	pulmonary alveolar:	n/a
45	chr9:118530-118580	IMR90	lung:	fetal
46	chr9:104568-104618	HMEC	breast:	n/a
47	chr9:114434-114484	GM19239	blood:	n/a
48	chr9:11410-11460	HRE	kidney:	n/a
49	chr9:112618-112668	SK-N-SH	brain:	n/a
50	chr9:104568-104618	U87	brain:	n/a

No data

(count:52 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FOXD4-2	chr9:102716-103067	NONHSAT129896
2	lnc-FOXD4-2	chr9:102740-102850	NONHSAT129895
3	lnc-DOCK8-3	chr9:74882-75298	ENSG00000225655.1
4	lnc-DOCK8-3	chr9:72716-72816	ENSG00000225655.1
5	lnc-DOCK8-7	chr9:13516-14522	NONHSAT129877
6	lnc-DOCK8-7	chr9:12708-12834	NONHSAT129877
7	lnc-FAM138C-3	chr9:26159-26368	expReg_chr9_16_-
8	lnc-DOCK8-3	chr9:88742-88826	ENSG00000225655.1
9	lnc-FOXD4-2	chr9:102740-102941	ENSG00000227917
10	lnc-FOXD4-3	chr9:114040-115772	NONHSAT129899
11	lnc-DOCK8-6	chr9:78742-78826	NONHSAT129886
12	lnc-FOXD4-2	chr9:109596-109842	NONHSAT129897
13	lnc-DOCK8-6	chr9:64882-65298	NONHSAT129887
14	lnc-DOCK8-3	chr9:74149-74205	ENSG00000225655.1
15	lnc-FOXD4-2	chr9:108804-109469	NONHSAT129897
16	lnc-DOCK8-3	chr9:72701-72816	ENSG00000225655.1
17	lnc-FAM138C-2	chr9:35504-35841	ENSG00000218839.3
18	lnc-DOCK8-6	chr9:62706-62816	NONHSAT129887
19	lnc-DOCK8-6	chr9:62701-62816	NONHSAT129886
20	lnc-DOCK8-6	chr9:64149-64205	NONHSAT129888
21	lnc-FAM138C-2	chr9:35504-35864	NONHSAT129883
22	lnc-FOXD4-3	chr9:113606-113656	NONHSAT129899
23	lnc-FOXD4-2	chr9:102473-102541	ENSG00000227917
24	lnc-FAM138C-2	chr9:35028-35264	ENSG00000218839.3
25	lnc-DOCK8-3	chr9:74882-75298	ENSG00000225655.1
26	lnc-FOXD4-4	chr9:91002-91304	NONHSAT129893
27	lnc-DOCK8-6	chr9:64882-65292	ucscGeneNc_uc003zfx_2
28	lnc-FOXD4-4	chr9:92740-92941	ucscGeneNc_uc003zfy_2
29	lnc-FOXD4-4	chr9:92473-92541	NONHSAT129893
30	lnc-DOCK8-6	chr9:62698-62816	ucscGeneNc_uc003zfx_2
31	lnc-FOXD4-4	chr9:92740-92850	NONHSAT129892
32	lnc-DOCK8-3	chr9:72706-72816	ENSG00000225655.1
33	lnc-FOXD4-1	chr9:112716-113067	ENSG00000231808
34	lnc-FAM138C-2	chr9:35060-35264	ENSG00000218839.3
35	lnc-DOCK8-6	chr9:62716-62816	NONHSAT129888
36	lnc-FOXD4-4	chr9:90995-91304	ucscGeneNc_uc003zfy_2
37	lnc-FOXD4-2	chr9:101014-101304	NONHSAT129895
38	lnc-FOXD4-4	chr9:90804-91304	NONHSAT129892
39	lnc-FAM138C-2	chr9:34394-34957	ENSG00000218839.3
40	lnc-DOCK8-7	chr9:11987-12340	NONHSAT129877
41	lnc-FOXD4-4	chr9:92740-92941	NONHSAT129893
42	lnc-FAM138C-2	chr9:35504-35856	ENSG00000218839.3
43	lnc-FAM138C-2	chr9:34394-34957	NONHSAT129883
44	lnc-FOXD4-2	chr9:103694-103754	NONHSAT129896
45	lnc-FOXD4-2	chr9:109316-109471	NONHSAT129895
46	lnc-FOXD4-1	chr9:113694-113754	ENSG00000231808
47	lnc-FOXD4-2	chr9:101002-101304	ENSG00000227917
48	lnc-DOCK8-3	chr9:79345-79537	ENSG00000225655.1
49	lnc-DOCK8-6	chr9:64882-65298	NONHSAT129888
50	lnc-FAM138C-2	chr9:35060-35264	NONHSAT129883

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1302	chr9:30216-30236	MIMAT0005890_9

No data

Variant related genes	Relation type
MIR1302-2	TF binding region
ENSG00000227917	TF binding region
FAM138C	TF binding region
ENSG00000231808	TF binding region
ENSG00000225655	TF binding region
CBWD1	TF binding region
FOXD4	TF binding region
DDX11L5	TF binding region
ENSG00000144140	TF binding region
ENSG00000181404	TF binding region
MIR1302-2	CpG island
ENSG00000227917	CpG island
FAM138C	CpG island
ENSG00000231808	CpG island
ENSG00000225655	CpG island
CBWD1	CpG island
FOXD4	CpG island
DDX11L5	CpG island
ENSG00000144140	CpG island
ENSG00000181404	CpG island

Extended variants
information (count: 2588 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:2588 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200405949	chr9:10024-10025	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs560816552	chr9:10030-10031	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs550294973	chr9:10041-10042	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs567034784	chr9:10047-10048	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs370278117	chr9:10052-10053	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs372722618	chr9:10053-10054	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs111216771	chr9:10066-10067	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs535912749	chr9:10075-10076	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs201348689	chr9:10076-10077	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs566619225	chr9:10094-10095	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs563097040	chr9:10098-10099	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs199692280	chr9:10099-10100	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs575580161	chr9:10105-10106	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs200836064	chr9:10123-10124	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs544581061	chr9:10129-10130	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs111216731	chr9:10135-10136	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs148094076	chr9:10141-10142	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs540685808	chr9:10147-10148	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs560678479	chr9:10152-10153	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs367993841	chr9:10160-10161	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs557530731	chr9:10164-10165	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs111216809	chr9:10168-10169	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs531791058	chr9:10174-10175	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs185444096	chr9:10177-10178	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs548709757	chr9:10181-10182	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs111216706	chr9:10184-10185	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs568499776	chr9:10191-10192	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs190296880	chr9:10192-10193	Active TSS ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs150763485	chr9:10209-10210	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs527680134	chr9:10210-10211	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs376915904	chr9:10230-10231	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs566741731	chr9:10244-10245	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs563179939	chr9:10262-10263	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs375052518	chr9:10269-10270	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs574047666	chr9:10274-10275	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs538570174	chr9:10275-10276	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs112163515	chr9:10279-10280	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs558287203	chr9:10282-10283	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs200036775	chr9:10288-10289	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs568722879	chr9:10291-10292	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs376298609	chr9:10294-10295	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs200882690	chr9:10300-10301	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs535827433	chr9:10327-10328	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs555670059	chr9:10329-10330	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs112982559	chr9:10330-10331	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs531873383	chr9:10340-10341	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs201604507	chr9:10342-10343	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs141182773	chr9:10351-10352	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs560498516	chr9:10362-10363	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs529747940	chr9:10363-10364	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Schizophrenia	23813976	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
Intracranial ependymoma	16609018	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:8800-14200	Weak transcription	Fetal Heart	heart
2	chr9:10000-10400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr9:10000-10600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
4	chr9:10000-11000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
5	chr9:10200-10400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr9:10200-10400	Enhancers	Colonic Mucosa	Colon
7	chr9:10200-10400	ZNF genes & repeats	Fetal Brain Male	brain
8	chr9:10200-10400	Enhancers	Fetal Lung	lung
9	chr9:10200-10400	ZNF genes & repeats	NH-A	brain
10	chr9:10200-10400	Flanking Bivalent TSS/Enh	NHEK	skin
11	chr9:10200-10600	ZNF genes & repeats	Placenta	Placenta
12	chr9:10200-11000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr9:10200-11200	Enhancers	Osteobl	bone
14	chr9:10200-11400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
15	chr9:10200-11800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr9:10400-10600	Bivalent/Poised TSS	NHEK	skin
17	chr9:10400-11400	ZNF genes & repeats	HSMM	muscle
18	chr9:10400-11400	Active TSS	K562	blood
19	chr9:10400-14200	Weak transcription	Fetal Lung	lung
20	chr9:10400-21600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr9:10600-11400	Active TSS	Placenta	Placenta
22	chr9:10800-11000	Weak transcription	GM12878-XiMat	blood
23	chr9:11000-11200	Enhancers	Primary hematopoietic stem cells	blood
24	chr9:11000-11200	Active TSS	Brain Inferior Temporal Lobe	brain
25	chr9:11000-11200	Enhancers	Pancreatic Islets	Pancreatic Islet
26	chr9:11000-11200	ZNF genes & repeats	NH-A	brain
27	chr9:11000-11200	Bivalent Enhancer	NHEK	skin
28	chr9:11000-11200	Enhancers	NHLF	lung
29	chr9:11000-11400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
30	chr9:11000-11400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
31	chr9:11000-11400	Active TSS	H9 Cell Line	embryonic stem cell
32	chr9:11000-11400	Active TSS	HUES6 Cell Line	embryonic stem cell
33	chr9:11000-11400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr9:11000-11400	ZNF genes & repeats	Thymus	Thymus
35	chr9:11000-11400	Active TSS	GM12878-XiMat	blood
36	chr9:11000-11400	Active TSS	HMEC	breast
37	chr9:11000-11400	Active TSS	HSMMtube	muscle
38	chr9:11000-11400	Active TSS	NHDF-Ad	bronchial
39	chr9:11000-14600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr9:11000-16000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chr9:11200-11400	Active TSS	Primary T cells from cord blood	blood
42	chr9:11200-11400	Bivalent/Poised TSS	NHEK	skin
43	chr9:11200-21600	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr9:11400-14200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr9:11400-14200	Weak transcription	HSMM	muscle
46	chr9:11400-14200	Weak transcription	HSMMtube	muscle
47	chr9:11400-14200	Weak transcription	K562	blood
48	chr9:11400-14400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
49	chr9:11400-20800	Weak transcription	Thymus	Thymus
50	chr9:11800-21600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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